G16064 (LOC107711804,LOC107563722,LOC107674484)


Basic Information

Item Value
gene id G16064
gene name LOC107711804,LOC107563722,LOC107674484
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1219664 ~ 1221960 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU23875
ACCTGTAGCGTGAGGGTGGTGTCCGTCGCCCAGTGGTGACCCTGCGGCCCCGCCATGCGCCACCTCCAGGTGCAGGCTTTTGTAATGCGATTGGCTGTGGCTGACCTCGCCCTCGGAGTGGGCGTCGGCCTCAGAGCTGGACCCCGGCTTGCCGTTCTTGCGTCGACGTGGCTGGTATTTGTACTCGGGATAATCTTTCTTATGCTGCTTCCTCAAACGCTCGGCTTCCTCGATAAACGGCCTCTTATCCGTCTCATTCAGCAGCCTGAAACACgcacaagcaaaaaaataatcttttttatattttgcacgCTACAAAAGGCTCAGAGGGCAGGTACTATTACCTGGTTTCTATTCAccgttgtttttttatatgtgtacTACATATTTTTTACGTACAGTATGAAAAAGTAAGCGTCAAAACGCCGAAACTGGCTCAGATTTCTCCTCTGAGAGTTTAACACGAGCAGATGAGcaggtttttttggtttttttaatgtctgaTATTCCACCTGGTTTGATTCTCCACCTGTTATGCCATCATCTGTAGAGCGAGACGCTTTCATCCAGCCACTGCATCTATAAACCCAGCAGAACCAAACGCCCGCTCTCTCgtgaaaataaactattttaaaaaaacacacactgtaatAGCCGAAGACGGCCTTCCAGCTCGGGTTAATAGCGCTGTTTACAGACCgcggcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttttgctcttttcCGCAGCAGCTCCTGAAGGGATTTGTCCCTCTAATCTGGCATGTTGAAGGAATGATTATTCTGAGCTAAAGCCCCTGAGAAACTCCAAGCCAGAGGCCGAGTTAACAGCATGCAGTTAATACAAGGCTGGCAGTGAGGTGTCCATCAGATCCACAGCAGAACCTGGAAGAGCCTTTAAATCACAGCATCAATTATTAACTGATAGAATTACAGTAATGAATTCACGGCGGCTGTTTCTGGAGTGGTTTATGACAGGAGAGGGAGTTGATTTCATGCGGCCGGATGCATTGTTTTTTATCAGATACACAAAAGCAATAGGCAAAATTATGACACGTTTTTCTATtacgccaaaatatcTGTGAATCCTACTGTGAACAtatcataatttcatttttgattttgcaTTGCTAAGGACCTAATTTGGACATATTTTTTGCACCATCATTTTCCAGTTGTATCTCCCCCAATATTGTTATTCCTAACCAACCAAATATCCCTGGAACctgtattattattcaattggacccttatggctggttttgtggtccggaGTCACATTTGGGTATTAATTACTATTGctactttttttacataattacttTTTCATACTCTTTGTCATCTCTAATGACGATTTTACAAGTGCTAAGCAAATGTGCCATATTAATAAATTTGCCTTTGGAGTGCTAAACAACACGATTTTGTTCGCTCAACACCACAGGCCTGTACAGAAGGCGACAGTCGAAGTGGTTTTTACTACACCTTAAAGGCGCTTCAGACGCTGACCGGAGCATATGAAAATACCATAACACCGTCTGGGTCGATTGTCGCTTCTTTTGCTCTCACCTCCAGAGTTTCCCGAGTGTTTTGCTGAGCTCGGCGTTGTGCAGGTGCGGGTATTGATCCGCCAGCTTCCTGCGCGCTGCCTGCGCCCACACCATGAACGCGTTCATCGGCCGCTTCACGTGAGGCTTGCTCTTGCTGCCCGAGTTCACGCGCACGGGCATGGGCACGAGCGTCCAGTCGTAGCCGTTGAGCACCTGACTGACCGCTTCGCGGATGCCGATGGGGAAGCGGTCGTCTTCTTCGTCGGACTTCACCGACACACCGGCGGAGACGCCGGGCGCATCATCACCGACGCCCGGCATCTGAGACGCCTGGCCGGGCAGAGGGGAGTCCGCCCCGCCGGGAGCACCGGACGAGTGTCCGGGGGACATGGAGTGACCGTCGTCCGAGACCCCGGGACTCATTTCCACCTCGGACATACTGTGCTCCTCCGCCGACATCGGTCCTCTCGCTCTGCGGCCACAGGTGTCTGCGGTAGGTCTAGTTTTTCCTCACAGGGCCTCTGTTTTTTAGGTTTATTGACTACAAACGATTTCTCTCTCGCTATAACAGTTGGCGATTTTTCTAATATCAAATATGTATTTCACGTCCTCCAAAGAACTTCAACACGCTTATTTTGTACACGTTCTTTCAGAATGAATCCATCCGCCGTCTCCCTCGGGATATAGATCTG

Function

NR:

description
PREDICTED: transcription factor Sox-10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23875 True 2271 lncRNA 0.48 2 1219664 1221960

Neighbor

gene id symbol gene type direction distance location
LOC122332636 LOC107674470,LOC107731661 coding downstream 66902 1149958 ~ 1152762 (-)
ccdc134 ccdc134,si:dkey-167k11.5,LOC107561099,LOC107674487,LOC107561218 coding downstream 85877 1128574 ~ 1133787 (-)
LOC122332629 NA coding downstream 93801 1109454 ~ 1125863 (-)
LOC122330439 NA coding downstream 141408 1076098 ~ 1078256 (-)
LOC122330038 NA coding downstream 157596 1059281 ~ 1062068 (-)
LOC122330600 polr2f,LOC107727050 coding upstream 5243 1227203 ~ 1229840 (-)
LOC122330477 NA coding upstream 25062 1247022 ~ 1249235 (-)
LOC122330412 NA coding upstream 31707 1253667 ~ 1257147 (-)
LOC122332678 NA coding upstream 40154 1262114 ~ 1263426 (-)
LOC122330270 NA coding upstream 41728 1263688 ~ 1268261 (-)
G16073 NA non-coding downstream 65084 1154300 ~ 1154580 (-)
LOC122330728 NA non-coding downstream 105359 1111882 ~ 1114305 (-)
G15875 NA non-coding downstream 124935 1092500 ~ 1094729 (-)
G15866 NA non-coding downstream 134854 1083440 ~ 1084810 (-)
G15808 NA non-coding downstream 257934 960955 ~ 961730 (-)
G16084 NA non-coding upstream 33095 1255055 ~ 1331182 (-)
LOC122330712 NA non-coding upstream 51328 1273288 ~ 1274200 (-)
G16094 NA non-coding upstream 68921 1290881 ~ 1291621 (-)
G16100 NA non-coding upstream 104359 1326319 ~ 1327991 (-)
G16124 NA non-coding upstream 195934 1417894 ~ 1480682 (-)
LOC122330455 kdelr3,LOC107731665,LOC107563718,LOC107679478,LOC107674488 other downstream 36076 1164316 ~ 1183588 (-)
G16054 mei1,LOC107674470,LOC107731661 other downstream 66904 1147589 ~ 1152760 (-)
LOC122329780 mei1,LOC107674482,LOC107561079,LOC107674470 other downstream 69771 1134810 ~ 1149893 (-)
G16048 NA other downstream 104962 1109491 ~ 1114702 (-)
LOC122332622 LOC107701866 other downstream 144337 1065482 ~ 1075327 (-)
G16172 NA other upstream 399004 1620964 ~ 1652366 (-)
zc3h7ba LOC107563727,LOC107672930,LOC107722838,LOC107572808 other upstream 566285 1788245 ~ 2000474 (-)
LOC122333107 NA other upstream 624732 1846692 ~ 1850280 (-)
pkn1b LOC107672927,LOC107755614,LOC107742419 other upstream 960566 2182526 ~ 2210233 (-)
G16402 ubn2b,LOC107567211,LOC107677340,LOC107741349,LOC107696333 other upstream 1081367 2303327 ~ 2362399 (-)

Expression


Co-expression Network