zmp:0000000896 (zmp:0000000896,LOC107745527,LOC107672931,LOC107563726,LOC107564880,LOC107711547,LOC107691081)


Basic Information

Item Value
gene id zmp:0000000896
gene name zmp:0000000896,LOC107745527,LOC107672931,LOC107563726,LOC107564880,LOC107711547,LOC107691081
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1538691 ~ 1550787 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043226333.1
agagagagagggagagagagagagagagagacagagagagagagggagagagagagagacttcacCTCGCATCTTCCTCATCGGGGTCGAGTCTGTTTGAAGAGTCGCTGttgtgttcatttctttcatctcttaCTCTTCCAGCTGAATCATGAGCGAAGCGTTATCGCTCTGTTCCTGTGATTATCTCTCAAGTTCAGAAAGAGGTCTGCATGGTACCGTCTGCATTCCCCAGCGGCGAGTGGCTGCTGGGAGGCTCTCAGTCAGACGAGGAGAAGCACGAGGAGCTGTGGGAGCGAGTGGAAGGAGTGAGGCACAAGCTCACCCGTGTTTTGAACCCGGCGAAGCTGACGCCCTACCTGCGGCAATGCAAGGTGATCGACGAGCAGGATGAGGACGAGGTGCTGAACTCCAGCCAGTATCCGCTGAGAATCAGCCGAGCCGGGCGTTTACTGGACATCCTGAGGGGGCGTGGCGAGCGTGGTCTCCAGGCCTTCATGGAGTCTCTGGAGTTTTATCATCCGGAGCAGTTCACGCAGCTGACCGGACAACAGCCGACGCAGCGCTGCTCCATCATGCTGGATGAGGAGGGTCCTGAGGGTCTGACTCAGTTCCTGCTGCTGGAGGTTCGTAAGCTGCGAGAACAGTTGCACTGCAGTCGTGTGTGTGAGCGGCGTCTGTCTCAGCGCTGTCGCGTGGCCGAAGACGAGCGCAGCCGAGCTGAACGCAAAACGCAGGAGCTGCGGCAGGACCGCACACAGCTGGAGAGGTTGAGGCAGGACTGGGAATCTGGCAGTCGTGAGTTGGGTTTGCTCAAGGAGAGACATCTGGAGCAGGCTGTGAAATACTCGCGAGCCTTAGAGGAACAGCGTAAAGCTACTGCACGCGAGACAGAACTGCTCACAGAGGTGGAGCAGCTCAGGAGGAGATTACAGGAGGTGGAGAGACCGGTTCATGTTGGCTCCGCCTCCTCGAGCAGTGGGGTGTGTGACAGCGCCCCCGCAGGACCGGAGGAAAGGCCACCCCTCGCCGTGAGAAACAAACAGTTTAACTCTGGAAATCAGGCTCTGTTGGACATCCTGAAGCAGGACAGGCGGGAAGCGGTGGAGCAGCGGCAGGAGCTGAGCAGCACCATCGCCCGACTGCAGGGGGAGCTGGAGAGCTCCGAGACTCAGAGAGAAAAATTGGCGTCTCAGTGTGAGCAGCTGCAGCTGCGTCTCAGAACCCTGCAGCTGGACTGGGAGACGGAGCAGAGCAGGAGTGTGTCCTACTTCAACCAGATCATGGagctggaaagagagagagaccaggcGCTGCGCAGTCGCGACAGTCTGCAGCTGGAGTTCACCGACTGCCTCCTGGACAAGAACCGTCTGCGCAAACGCATCGCAGAGCTGCAGAGCAGTGTGGAGCAGCtgcagagagagatggagaggaaccgagagcgGAGAGAGCAGAGCAACACCTGCATGCACTGCtCTCACATGTCTTTGTTCAGTGAGGATCAGTGTTTCGACCCGTGTTGTTCGGTTGATTTGAGTCCCAGTCCACTCACACTCAGAGCTCATCTGAAGtcaACCTCACAAGCTCAGATATGTGAGCAGTCTGAAGACTCCTACTTCTCTAACTCAGAGGAGAATCTGCTCATGccggagTGTAACGATGAGAAGGACATCAACAGACTCTCCACATTTCCCTTTCCTCCCTGCCTGAACTCAATCAACCGCAGAAAAAACATAGAGTTTGATCTGAACTCTTGGGGGAGTGATGAGAATGAACCACATACAGagGACTCGGACTCGTGTCTGATGAGTTCGTGGAGCTCTCTACCATCTCAGCTCTTTCCTCCTGACGTGATCAGCGTGACTCCGACTCTCCCGGTCAAACCTTCATCCTCCTCCCCGAGATCGGTGCTCTCCTTGTCCAAAAGCGCCAGTCTGGCGGACGACATCACTATCATCGGAGGGAACCGGAcgggtgtgtttgtgcagacGGTCAGGGCGGGCTCGCCTGCGCAGATCTGCGGCCTGAAGGAAGGCAGCGAACTAGTGGAGCTGGATCAGGTGTTGTTCGGCGAGGGTCGTGTTCGTCTCAGTCAGTGCACGGCTGAAGTGGCTCATTTCTCACTGCAGTGGTGGAGCGAACCCAACgcgctcaaacacacacacaaccccgACGGTTATTCCCGTTTGCTCGCTGAGCTCTCGTCCCCGTCGTTCACCGGCGCAGACTCGTTCTACGTGCGTGTGAACCTTGACCTCTGTCACCACGGCGACCCGCCGCGTCTCAGGGTTTGCTGTGACGACGTCCTGCACGTCACCGACACGCGTTACAACGGTAAATACCAGTGGCGCTGCGTTCGCGTGGACAAACACACGGGGGCGCCGCTGCAGGCCGGAGCCGTGCCCAACTACAACAGGGCCCAGCAGCTGCTGTTGGTGAGACTCCGTACGATGGCGCTGGAACAGAATCAGTACAGGAGGAAGTTCTGTAAGAAAACCTCTCAGCGCGTTCGGCTCATTAAAGCGGTCGCGGCGAACTATCGCGAGATTGGCTCGTCCAGTCCGGTGCTCTACACGCTCAGCAATCgtcatGAGGAGCAGCTGATCCCGTTCAGTCTGGTTCAGATGGTTGAGGTCAACAACAAGCGGCCGGTGGTTTTCTCTCCGTCGATCCTGTCCCGAGGGATCATCGAGCGTCTGCTGCAGCCGGCAGAATCCGGTCTGGATTTCAACACCTGCCATCCAGAGCCAGTGGAAAGTTGCATGCATCAGGATAAGAGCGTGTTCCTCACCGACTCCACAGATCAACCACTAGGAATCAAACTACAGAGCATCGAGGAGGTTATTAACCAGgacaaACACTGTCTGCTTCAGCTGGGCTTGAATCATGTGGAGAACCTCCTGAAGCAGAGCATCTATCCCATCATCATCTACATCAAACCCAAAGACAAGAAGGGACGCAAGTTCAGGAAGCTGTTATTGGGCCAGGCTGAGGAGGACCTGATGGAGGCCTGTCAGATGGAGGAGCTTCAGCTGGAGACTCTCCCCGTGATGTTCAACACGGTGGAGCCGAACGAGTGGAGCAGCACCGACGAGCTCCTGGCCATCATACGCAGCAGCATCCTGAGCCAGCAGAGCAGCGTGGTGTGGCTGGAGCAGGAGCGACTCCAGTAGAGActcatatactccagaatgagAATCCAGTCATTagcatttcaaaaaaattatgaaatatatatatatatatataaacaaactgaTGCCGAAGATTGGGTTTTCTAAAGTTTAATGTTCACGTTTTATAATCATCTGTACTTGAACTGTACTGTATATCGTTGCATCTGTGAAAGTATCTGTATTTATTATGATCTCCAACCATGAATTCCATGACTACATTGAGACGCTGTTTGGGATGGACTACCATCAGGTGTTACAATCGAACATATTTCTGCTGTTGATCAGTGATACATCTTTTAACCACCTAAGACTTGGTTAGCATATGGATTGAACTTATGTTGTtttaagggagaaaaaaaaaaacaattccgGGACTAATAGAAAGACATGCATAggcaaaaataattgttttttaaaaatcaaaaatacatttttttctccatttcacaTTTTCCAGAGATGCTGATTTGTGacagtatttaaatttaaatgataattaccaaatatatttccataagtgtcactaaatgaaaaaaaaataaatacattttttgcagaCCATGGTCAAGGTAAAACATCCAATCATTTGGTATCTCTGAAATGTACATGACATCCAGACTTAAAACTCTGGCATGTAGAGTGTCTTAAGACTACAATATAATGTCCATATATAAAGACGCATGGTCTTAAGAGGGTAAATGGTTATATTTCTCTCAATTAGTTCAATAACACAAATAGCTCTTTTTACAAGTTAAATTATGAACATATCTACTGTGAAGACGCTTTGCAGCTCTTCCTTTAAGTCCTCTATAAAACAACCAAAGAACACTTCTACGACTCATCATagttaatattgttatttgatGAAGCGTAAATTGCCTTTTAACATTATActtgcaataaaatatttacaattgg
>XM_043226343.1
agagagagagggagagagagagagagagagacagagagagagagggagagagagagagacttcacCTCGCATCTTCCTCATCGGGGTCGAGTCTGTTTGAAGAGTCGCTGttgtgttcatttctttcatctcttaCTCTTCCAGCTGAATCATGAGCGGCGAGTGGCTGCTGGGAGGCTCTCAGTCAGACGAGGAGAAGCACGAGGAGCTGTGGGAGCGAGTGGAAGGAGTGAGGCACAAGCTCACCCGTGTTTTGAACCCGGCGAAGCTGACGCCCTACCTGCGGCAATGCAAGGTGATCGACGAGCAGGATGAGGACGAGGTGCTGAACTCCAGCCAGTATCCGCTGAGAATCAGCCGAGCCGGGCGTTTACTGGACATCCTGAGGGGGCGTGGCGAGCGTGGTCTCCAGGCCTTCATGGAGTCTCTGGAGTTTTATCATCCGGAGCAGTTCACGCAGCTGACCGGACAACAGCCGACGCAGCGCTGCTCCATCATGCTGGATGAGGAGGGTCCTGAGGGTCTGACTCAGTTCCTGCTGCTGGAGGTTCGTAAGCTGCGAGAACAGTTGCACTGCAGTCGTGTGTGTGAGCGGCGTCTGTCTCAGCGCTGTCGCGTGGCCGAAGACGAGCGCAGCCGAGCTGAACGCAAAACGCAGGAGCTGCGGCAGGACCGCACACAGCTGGAGAGGTTGAGGCAGGACTGGGAATCTGGCAGTCGTGAGTTGGGTTTGCTCAAGGAGAGACATCTGGAGCAGGCTGTGAAATACTCGCGAGCCTTAGAGGAACAGCGTAAAGCTACTGCACGCGAGACAGAACTGCTCACAGAGGTGGAGCAGCTCAGGAGGAGATTACAGGAGGTGGAGAGACCGGTTCATGTTGGCTCCGCCTCCTCGAGCAGTGGGGTGTGTGACAGCGCCCCCGCAGGACCGGAGGAAAGGCCACCCCTCGCCGTGAGAAACAAACAGTTTAACTCTGGAAATCAGGCTCTGTTGGACATCCTGAAGCAGGACAGGCGGGAAGCGGTGGAGCAGCGGCAGGAGCTGAGCAGCACCATCGCCCGACTGCAGGGGGAGCTGGAGAGCTCCGAGACTCAGAGAGAAAAATTGGCGTCTCAGTGTGAGCAGCTGCAGCTGCGTCTCAGAACCCTGCAGCTGGACTGGGAGACGGAGCAGAGCAGGAGTGTGTCCTACTTCAACCAGATCATGGagctggaaagagagagagaccaggcGCTGCGCAGTCGCGACAGTCTGCAGCTGGAGTTCACCGACTGCCTCCTGGACAAGAACCGTCTGCGCAAACGCATCGCAGAGCTGCAGAGCAGTGTGGAGCAGCtgcagagagagatggagaggaaccgagagcgGAGAGAGCAGAGCAACACCTGCATGCACTGCtCTCACATGTCTTTGTTCAGTGAGGATCAGTGTTTCGACCCGTGTTGTTCGGTTGATTTGAGTCCCAGTCCACTCACACTCAGAGCTCATCTGAAGtcaACCTCACAAGCTCAGATATGTGAGCAGTCTGAAGACTCCTACTTCTCTAACTCAGAGGAGAATCTGCTCATGccggagTGTAACGATGAGAAGGACATCAACAGACTCTCCACATTTCCCTTTCCTCCCTGCCTGAACTCAATCAACCGCAGAAAAAACATAGAGTTTGATCTGAACTCTTGGGGGAGTGATGAGAATGAACCACATACAGagGACTCGGACTCGTGTCTGATGAGTTCGTGGAGCTCTCTACCATCTCAGCTCTTTCCTCCTGACGTGATCAGCGTGACTCCGACTCTCCCGGTCAAACCTTCATCCTCCTCCCCGAGATCGGTGCTCTCCTTGTCCAAAAGCGCCAGTCTGGCGGACGACATCACTATCATCGGAGGGAACCGGAcgggtgtgtttgtgcagacGGTCAGGGCGGGCTCGCCTGCGCAGATCTGCGGCCTGAAGGAAGGCAGCGAACTAGTGGAGCTGGATCAGGTGTTGTTCGGCGAGGGTCGTGTTCGTCTCAGTCAGTGCACGGCTGAAGTGGCTCATTTCTCACTGCAGTGGTGGAGCGAACCCAACgcgctcaaacacacacacaaccccgACGGTTATTCCCGTTTGCTCGCTGAGCTCTCGTCCCCGTCGTTCACCGGCGCAGACTCGTTCTACGTGCGTGTGAACCTTGACCTCTGTCACCACGGCGACCCGCCGCGTCTCAGGGTTTGCTGTGACGACGTCCTGCACGTCACCGACACGCGTTACAACGGTAAATACCAGTGGCGCTGCGTTCGCGTGGACAAACACACGGGGGCGCCGCTGCAGGCCGGAGCCGTGCCCAACTACAACAGGGCCCAGCAGCTGCTGTTGGTGAGACTCCGTACGATGGCGCTGGAACAGAATCAGTACAGGAGGAAGTTCTGTAAGAAAACCTCTCAGCGCGTTCGGCTCATTAAAGCGGTCGCGGCGAACTATCGCGAGATTGGCTCGTCCAGTCCGGTGCTCTACACGCTCAGCAATCgtcatGAGGAGCAGCTGATCCCGTTCAGTCTGGTTCAGATGGTTGAGGTCAACAACAAGCGGCCGGTGGTTTTCTCTCCGTCGATCCTGTCCCGAGGGATCATCGAGCGTCTGCTGCAGCCGGCAGAATCCGGTCTGGATTTCAACACCTGCCATCCAGAGCCAGTGGAAAGTTGCATGCATCAGGATAAGAGCGTGTTCCTCACCGACTCCACAGATCAACCACTAGGAATCAAACTACAGAGCATCGAGGAGGTTATTAACCAGgacaaACACTGTCTGCTTCAGCTGGGCTTGAATCATGTGGAGAACCTCCTGAAGCAGAGCATCTATCCCATCATCATCTACATCAAACCCAAAGACAAGAAGGGACGCAAGTTCAGGAAGCTGTTATTGGGCCAGGCTGAGGAGGACCTGATGGAGGCCTGTCAGATGGAGGAGCTTCAGCTGGAGACTCTCCCCGTGATGTTCAACACGGTGGAGCCGAACGAGTGGAGCAGCACCGACGAGCTCCTGGCCATCATACGCAGCAGCATCCTGAGCCAGCAGAGCAGCGTGGTGTGGCTGGAGCAGGAGCGACTCCAGTAGAGActcatatactccagaatgagAATCCAGTCATTagcatttcaaaaaaattatgaaatatatatatatatatataaacaaactgaTGCCGAAGATTGGGTTTTCTAAAGTTTAATGTTCACGTTTTATAATCATCTGTACTTGAACTGTACTGTATATCGTTGCATCTGTGAAAGTATCTGTATTTATTATGATCTCCAACCATGAATTCCATGACTACATTGAGACGCTGTTTGGGATGGACTACCATCAGGTGTTACAATCGAACATATTTCTGCTGTTGATCAGTGATACATCTTTTAACCACCTAAGACTTGGTTAGCATATGGATTGAACTTATGTTGTtttaagggagaaaaaaaaaaacaattccgGGACTAATAGAAAGACATGCATAggcaaaaataattgttttttaaaaatcaaaaatacatttttttctccatttcacaTTTTCCAGAGATGCTGATTTGTGacagtatttaaatttaaatgataattaccaaatatatttccataagtgtcactaaatgaaaaaaaaataaatacattttttgcagaCCATGGTCAAGGTAAAACATCCAATCATTTGGTATCTCTGAAATGTACATGACATCCAGACTTAAAACTCTGGCATGTAGAGTGTCTTAAGACTACAATATAATGTCCATATATAAAGACGCATGGTCTTAAGAGGGTAAATGGTTATATTTCTCTCAATTAGTTCAATAACACAAATAGCTCTTTTTACAAGTTAAATTATGAACATATCTACTGTGAAGACGCTTTGCAGCTCTTCCTTTAAGTCCTCTATAAAACAACCAAAGAACACTTCTACGACTCATCATagttaatattgttatttgatGAAGCGTAAATTGCCTTTTAACATTATActtgcaataaaatatttacaattgg

Function

NR:

description
PREDICTED: caspase recruitment domain-containing protein 10

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043226333.1 True 4097 mRNA 0.51 25 1538691 1550787
XM_043226343.1 False 4018 mRNA 0.51 24 1538691 1550787

Neighbor

gene id symbol gene type direction distance location
LOC122329710 LOC107564877 coding downstream 383 1530412 ~ 1538308 (-)
tnrc6bb.1 LOC107745528,LOC107672922,LOC107722687 coding downstream 31223 1492543 ~ 1507468 (-)
LOC122330636 si:dkey-217f16.5,tmem184bb,LOC107745530,LOC107722689,LOC107573503 coding downstream 46941 1483985 ~ 1491750 (-)
LOC122330283 NA coding downstream 155550 1380918 ~ 1383141 (-)
LOC122329932 NA coding downstream 177927 1353090 ~ 1360764 (-)
LOC122329992 NA coding upstream 31301 1582088 ~ 1585707 (-)
LOC122332889 LOC107575231,LOC107572359,LOC107722878,LOC107709162 coding upstream 34924 1585711 ~ 1586511 (-)
LOC122330436 NA coding upstream 56277 1607064 ~ 1610850 (-)
gucy2ca gucy2c,LOC107672912,LOC107745524,LOC107563725 coding upstream 112878 1663665 ~ 1680199 (-)
csdc2b csdc2,LOC107672917,LOC107745522,LOC107691088,LOC108272855,LOC107734809 coding upstream 136380 1687167 ~ 1691179 (-)
G16124 NA non-coding downstream 58009 1417894 ~ 1480682 (-)
LOC122330746 NA non-coding downstream 83631 1453240 ~ 1455060 (-)
G16125 NA non-coding downstream 104880 1430753 ~ 1433811 (-)
G16084 NA non-coding downstream 207509 1255055 ~ 1331182 (-)
G16159 NA non-coding upstream 6615 1557402 ~ 1557841 (-)
G16161 NA non-coding upstream 14406 1565193 ~ 1578960 (-)
LOC122330691 NA non-coding upstream 36054 1586841 ~ 1588429 (-)
G16170 NA non-coding upstream 66461 1617248 ~ 1647616 (-)
G16171 NA non-coding upstream 69120 1619907 ~ 1865318 (-)
LOC122330455 kdelr3,LOC107731665,LOC107563718,LOC107679478,LOC107674488 other downstream 355103 1164316 ~ 1183588 (-)
G16054 mei1,LOC107674470,LOC107731661 other downstream 385931 1147589 ~ 1152760 (-)
LOC122329780 mei1,LOC107674482,LOC107561079,LOC107674470 other downstream 388798 1134810 ~ 1149893 (-)
G16048 NA other downstream 423989 1109491 ~ 1114702 (-)
LOC122332622 LOC107701866 other downstream 463364 1065482 ~ 1075327 (-)
G16172 NA other upstream 70177 1620964 ~ 1652366 (-)
zc3h7ba LOC107563727,LOC107672930,LOC107722838,LOC107572808 other upstream 237458 1788245 ~ 2000474 (-)
LOC122333107 NA other upstream 295905 1846692 ~ 1850280 (-)
pkn1b LOC107672927,LOC107755614,LOC107742419 other upstream 631739 2182526 ~ 2210233 (-)
G16402 ubn2b,LOC107567211,LOC107677340,LOC107741349,LOC107696333 other upstream 752540 2303327 ~ 2362399 (-)

Expression


Co-expression Network