LOC122330283


Basic Information

Item Value
gene id LOC122330283
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1380918 ~ 1383141 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043227168.1
CAGTTATTATTGTTTGAAGGGAAAGGTTGTTCAAAACCCAGCTGAAGATCAGAAACAATCTGAAGCGTGATGAAGATGTACTACAGAAACATGCAAGCAGGCTAAATCGGTTTGGATGAAATCATCGTCTtcgtttttgtcatttttttagacCACACATTCACGCAGGAGAACCTATTTTACAGAGAATTCTGGCCCCTACCGTAAACCcttgttttcatttgctCTCAACGTGATCGCGCCACCTTCAGACCTCGGTCACCGTTTCGAGTTTATCTCGGGCTGGTCTACAAGATCCAGAACCTCCACGATCAGAAACCGCTGCTGCTTCAACCAAGAGACTTCCATCGAAAGAAAAATGATGCAGCGAACTGTGGAGCATCTTCAGATTCTGCTGATCGGTAAAACCGGTTCAGGAGTAAGCTCTTCTGGAAACACTATCCTGggtgaaaatgtgtttctgaGCGGTCGGAGCCTGACCTCCATCACCAACAGATGCCAAAAACACACGGCTGAAGTGTCCAACAGAAGAGTTACAGTAACGGACACCCCGACTTTCTTCAATACCACCAATATTGGTCTCAATGAGGAGTTAAAGAGAGGCTTGAAGACGTGCTCTTCAGGGATCCACGCCATTCTTCTGGTTTTCCCTTTACACACTTTCACTCAGCAAGATGCTGAGACCATGCTCTTATTCAAGCAGATGTTTGGTGAAAACGCTGTGAAACACACTCTAGTCCTGTTCACACATGGAGACCagcttcaaaataaatcaatcgaTCAACTCATTAGAAGCAACGCTGGGCTGTCCAAACTAACAGAGGAGTGTGGAGGGAGATTTCATTCACTGAACAACACGGATCTGAACGACAGAGAGCAGGTCGCCAAACTCTTGACCAAGATCCAGCGGATGGTGTCTGAAAACCAGACCAGCTGCTACACCCTACAGATGTTTGAGAGTCAGTCACGCAAAGCGCTTCTGCAGAGGTTTACAAAGAAGAAACCTCTGTGCGCAGTCAGTGCTTTTACTGTGTTTGCATTGGGTTTTGTTAATATGAGGAACGAAGGGTCGTTTGATGTCAACACGTTTCTGCGTGGTTGTGCTGGAGGGGTGTTATCAGCGGTGTCAGGAGCCGTCTGCTCACAGATACCCGACAGATGGCTTCAGAGATTCACTGAAGAGCATCCGAAATGCGTCAAACTGCTGGAAGTCACAAGCGGTTGTGCCGCTGGGTTGGTCGCAGGGTATTTTGTGGCTCCAGGTGGTTTATCAGCTATGTTATTAAAAGGATTGCAAGGGTGTGTGGTTTATACCCTCTTCAGACACCATTTCAGATAACCATCCGAACTGCTGCGTGGAACAAACATGTATCTC
>XM_043227176.1
CAGTTATTATTGTTTGAAGGGAAAGGTTGTTCAAAACCCAGCTGAAGATCAGAAACAATCTGAAGCGTGATGAAGATGTACTACAGAAACATGCAAGCAGGCTAAATCGGTTTGGATGAAATCATCGTCTtcgtttttgtcatttttttagacCACACATTCACGCAGGAGAACCTATTTTACAGAGAATTCTGGCCCCTACCGTAAACCcttgttttcatttgctgtGAGAGTATTTTCACTTTATAACACGAACCATTaccattaatacatttaaatgcatgattattattaaaagatagCGTCGTGTTTGTGTCTGCAGCTCAACGTGATCGCGCCACCTTCAGACCTCGGTCACCGTTTCGAGTTTATCTCGGGCTGGTCTACAAGATCCAGAACCTCCACGATCAGAAACCGCTGCTGCTTCAACCAAGAGACTTCCATCGAAAGAAAAATGATGCAGCGAACTGTGGAGCATCTTCAGATTCTGCTGATCGGTAAAACCGGTTCAGGAGTAAGCTCTTCTGGAAACACTATCCTGggtgaaaatgtgtttctgaGCGGTCGGAGCCTGACCTCCATCACCAACAGATGCCAAAAACACACGGCTGAAGTGTCCAACAGAAGAGTTACAGTAACGGACACCCCGACTTTCTTCAATACCACCAATATTGGTCTCAATGAGGAGTTAAAGAGAGGCTTGAAGACGTGCTCTTCAGGGATCCACGCCATTCTTCTGGTTTTCCCTTTACACACTTTCACTCAGCAAGATGCTGAGACCATGCTCTTATTCAAGCAGATGTTTGGTGAAAACGCTGTGAAACACACTCTAGTCCTGTTCACACATGGAGACCagcttcaaaataaatcaatcgaTCAACTCATTAGAAGCAACGCTGGGCTGTCCAAACTAACAGAGGAGTGTGGAGGGAGATTTCATTCACTGAACAACACGGATCTGAACGACAGAGAGCAGGTCGCCAAACTCTTGACCAAGATCCAGCGGATGGTGTCTGAAAACCAGACCAGCTGCTACACCCTACAGATGTTTGAGAGTCAGTCACGCAAAGCGCTTCTGCAGAGGTTTACAAAGAAGAAACCTCTGTGCGCAGTCAGTGCTTTTACTGTGTTTGCATTGGGTTTTGTTAATATGAGGAACGAAGGGTCGTTTGATGTCAACACGTTTCTGCGTGGTTGTGCTGGAGGGGTGTTATCAGCGGTGTCAGGAGCCGTCTGCTCACAGATACCCGACAGATGGCTTCAGAGATTCACTGAAGAGCATCCGAAATGCGTCAAACTGCTGGAAGTCACAAGCGGTTGTGCCGCTGGGTTGGTCGCAGGGTATTTTGTGGCTCCAGGTGGTTTATCAGCTATGTTATTAAAAGGATTGCAAGGGTGTGTGGTTTATACCCTCTTCAGACACCATTTCAGATAACCATCCGAACTGCTGCGTGGAACAAACATGTATCTC
>XM_043227185.1
CAGTTATTATTGTTTGAAGGGAAAGGTTGTTCAAAACCCAGCTGAAGATCAGAAACAATCTGAAGCGTGATGAAGATGTACTACAGAAACATGCAAGCAGGCTAAATCGGTTTGGATGAAATCATCGTCTtcgtttttgtcatttttttagacCACACATTCACGCAGGAGAACCTATTTTACAGAGAATTCTGGCCCCTACCGTAAACCcttgttttcatttgctCGTCGTGTTTGTGTCTGCAGCTCAACGTGATCGCGCCACCTTCAGACCTCGGTCACCGTTTCGAGTTTATCTCGGGCTGGTCTACAAGATCCAGAACCTCCACGATCAGAAACCGCTGCTGCTTCAACCAAGAGACTTCCATCGAAAGAAAAATGATGCAGCGAACTGTGGAGCATCTTCAGATTCTGCTGATCGGTAAAACCGGTTCAGGAGTAAGCTCTTCTGGAAACACTATCCTGggtgaaaatgtgtttctgaGCGGTCGGAGCCTGACCTCCATCACCAACAGATGCCAAAAACACACGGCTGAAGTGTCCAACAGAAGAGTTACAGTAACGGACACCCCGACTTTCTTCAATACCACCAATATTGGTCTCAATGAGGAGTTAAAGAGAGGCTTGAAGACGTGCTCTTCAGGGATCCACGCCATTCTTCTGGTTTTCCCTTTACACACTTTCACTCAGCAAGATGCTGAGACCATGCTCTTATTCAAGCAGATGTTTGGTGAAAACGCTGTGAAACACACTCTAGTCCTGTTCACACATGGAGACCagcttcaaaataaatcaatcgaTCAACTCATTAGAAGCAACGCTGGGCTGTCCAAACTAACAGAGGAGTGTGGAGGGAGATTTCATTCACTGAACAACACGGATCTGAACGACAGAGAGCAGGTCGCCAAACTCTTGACCAAGATCCAGCGGATGGTGTCTGAAAACCAGACCAGCTGCTACACCCTACAGATGTTTGAGAGTCAGTCACGCAAAGCGCTTCTGCAGAGGTTTACAAAGAAGAAACCTCTGTGCGCAGTCAGTGCTTTTACTGTGTTTGCATTGGGTTTTGTTAATATGAGGAACGAAGGGTCGTTTGATGTCAACACGTTTCTGCGTGGTTGTGCTGGAGGGGTGTTATCAGCGGTGTCAGGAGCCGTCTGCTCACAGATACCCGACAGATGGCTTCAGAGATTCACTGAAGAGCATCCGAAATGCGTCAAACTGCTGGAAGTCACAAGCGGTTGTGCCGCTGGGTTGGTCGCAGGGTATTTTGTGGCTCCAGGTGGTTTATCAGCTATGTTATTAAAAGGATTGCAAGGGTGTGTGGTTTATACCCTCTTCAGACACCATTTCAGATAACCATCCGAACTGCTGCGTGGAACAAACATGTATCTC
>XM_043227194.1
AAACCAAAACCCGAGCTTTAATTTAGGTCAGTTAATACCGAACAACTGAGACAGAAGAACACCGTGATGCAGCGAACTGTGGAGCATCTTCAGATTCTGCTGATCGGTAAAACCGGTTCAGGAGTAAGCTCTTCTGGAAACACTATCCTGggtgaaaatgtgtttctgaGCGGTCGGAGCCTGACCTCCATCACCAACAGATGCCAAAAACACACGGCTGAAGTGTCCAACAGAAGAGTTACAGTAACGGACACCCCGACTTTCTTCAATACCACCAATATTGGTCTCAATGAGGAGTTAAAGAGAGGCTTGAAGACGTGCTCTTCAGGGATCCACGCCATTCTTCTGGTTTTCCCTTTACACACTTTCACTCAGCAAGATGCTGAGACCATGCTCTTATTCAAGCAGATGTTTGGTGAAAACGCTGTGAAACACACTCTAGTCCTGTTCACACATGGAGACCagcttcaaaataaatcaatcgaTCAACTCATTAGAAGCAACGCTGGGCTGTCCAAACTAACAGAGGAGTGTGGAGGGAGATTTCATTCACTGAACAACACGGATCTGAACGACAGAGAGCAGGTCGCCAAACTCTTGACCAAGATCCAGCGGATGGTGTCTGAAAACCAGACCAGCTGCTACACCCTACAGATGTTTGAGAGTCAGTCACGCAAAGCGCTTCTGCAGAGGTTTACAAAGAAGAAACCTCTGTGCGCAGTCAGTGCTTTTACTGTGTTTGCATTGGGTTTTGTTAATATGAGGAACGAAGGGTCGTTTGATGTCAACACGTTTCTGCGTGGTTGTGCTGGAGGGGTGTTATCAGCGGTGTCAGGAGCCGTCTGCTCACAGATACCCGACAGATGGCTTCAGAGATTCACTGAAGAGCATCCGAAATGCGTCAAACTGCTGGAAGTCACAAGCGGTTGTGCCGCTGGGTTGGTCGCAGGGTATTTTGTGGCTCCAGGTGGTTTATCAGCTATGTTATTAAAAGGATTGCAAGGGTGTGTGGTTTATACCCTCTTCAGACACCATTTCAGATAACCATCCGAACTGCTGCGTGGAACAAACATGTATCTC
>XM_043227203.1
cgcGTTAACTTTTCATTCGTAAAACCGAGATTCTGTTTGGTCTTTCTCGCGGAGATTTTGCTTACTGTTTAAATCTCTTAAACGCACTGTGACTCATGACAACATTTTCTTACTGAAtgattttttctctttttgtattATGTCAGTGGTGCTGTCTCCATTCTGTCTTGcagtaaaaccaaaaaacaaacaaaaaacctttttttgctgtagaaatgtgtgcatttgtaaATATGGGTCTAGCTTCCGGTCTCATCTGCATCAGGCTATGTTTTGCTGTGGCCTACAAAACGGTTTAGCTGCTTGACTGAAAAGTGGTGTGTCTCGGCATATTATTTTAAGTGATGCAGCGAACTGTGGAGCATCTTCAGATTCTGCTGATCGGTAAAACCGGTTCAGGAGTAAGCTCTTCTGGAAACACTATCCTGggtgaaaatgtgtttctgaGCGGTCGGAGCCTGACCTCCATCACCAACAGATGCCAAAAACACACGGCTGAAGTGTCCAACAGAAGAGTTACAGTAACGGACACCCCGACTTTCTTCAATACCACCAATATTGGTCTCAATGAGGAGTTAAAGAGAGGCTTGAAGACGTGCTCTTCAGGGATCCACGCCATTCTTCTGGTTTTCCCTTTACACACTTTCACTCAGCAAGATGCTGAGACCATGCTCTTATTCAAGCAGATGTTTGGTGAAAACGCTGTGAAACACACTCTAGTCCTGTTCACACATGGAGACCagcttcaaaataaatcaatcgaTCAACTCATTAGAAGCAACGCTGGGCTGTCCAAACTAACAGAGGAGTGTGGAGGGAGATTTCATTCACTGAACAACACGGATCTGAACGACAGAGAGCAGGTCGCCAAACTCTTGACCAAGATCCAGCGGATGGTGTCTGAAAACCAGACCAGCTGCTACACCCTACAGATGTTTGAGAGTCAGTCACGCAAAGCGCTTCTGCAGAGGTTTACAAAGAAGAAACCTCTGTGCGCAGTCAGTGCTTTTACTGTGTTTGCATTGGGTTTTGTTAATATGAGGAACGAAGGGTCGTTTGATGTCAACACGTTTCTGCGTGGTTGTGCTGGAGGGGTGTTATCAGCGGTGTCAGGAGCCGTCTGCTCACAGATACCCGACAGATGGCTTCAGAGATTCACTGAAGAGCATCCGAAATGCGTCAAACTGCTGGAAGTCACAAGCGGTTGTGCCGCTGGGTTGGTCGCAGGGTATTTTGTGGCTCCAGGTGGTTTATCAGCTATGTTATTAAAAGGATTGCAAGGGTGTGTGGTTTATACCCTCTTCAGACACCATTTCAGATAACCATCCGAACTGCTGCGTGGAACAAACATGTATCTC

Function

GO:

id name namespace
GO:0008015 blood circulation biological_process
GO:0003013 circulatory system process biological_process
GO:0035379 carbon dioxide transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043227168.1 False 1375 mRNA 0.47 3 1380918 1383141
XM_043227176.1 True 1471 mRNA 0.46 2 1380918 1383141
XM_043227185.1 False 1395 mRNA 0.47 3 1380918 1383141
XM_043227194.1 False 1080 mRNA 0.47 2 1380918 1382658
XM_043227203.1 False 1358 mRNA 0.45 2 1380918 1382430

Neighbor

gene id symbol gene type direction distance location
LOC122329932 NA coding downstream 20154 1353090 ~ 1360764 (-)
LOC122332690 LOC107705851 coding downstream 107671 1270753 ~ 1273247 (-)
LOC122330270 NA coding downstream 112657 1263688 ~ 1268261 (-)
LOC122332678 NA coding downstream 117492 1262114 ~ 1263426 (-)
LOC122330412 NA coding downstream 123771 1253667 ~ 1257147 (-)
LOC122330636 si:dkey-217f16.5,tmem184bb,LOC107745530,LOC107722689,LOC107573503 coding upstream 100844 1483985 ~ 1491750 (-)
tnrc6bb.1 LOC107745528,LOC107672922,LOC107722687 coding upstream 109402 1492543 ~ 1507468 (-)
LOC122329710 LOC107564877 coding upstream 147271 1530412 ~ 1538308 (-)
zmp:0000000896 zmp:0000000896,LOC107745527,LOC107672931,LOC107563726,LOC107564880,LOC107711547,LOC107691081 coding upstream 155550 1538691 ~ 1550787 (-)
LOC122329992 NA coding upstream 198947 1582088 ~ 1585707 (-)
G16084 NA non-coding downstream 49736 1255055 ~ 1331182 (-)
G16100 NA non-coding downstream 52927 1326319 ~ 1327991 (-)
G16094 NA non-coding downstream 89297 1290881 ~ 1291621 (-)
LOC122330712 NA non-coding downstream 106718 1273288 ~ 1274200 (-)
G16064 LOC107711804,LOC107563722,LOC107674484 non-coding downstream 158958 1219664 ~ 1221960 (-)
G16124 NA non-coding upstream 34753 1417894 ~ 1480682 (-)
G16125 NA non-coding upstream 47612 1430753 ~ 1433811 (-)
LOC122330746 NA non-coding upstream 70099 1453240 ~ 1455060 (-)
G16159 NA non-coding upstream 174261 1557402 ~ 1557841 (-)
G16161 NA non-coding upstream 182052 1565193 ~ 1578960 (-)
LOC122330455 kdelr3,LOC107731665,LOC107563718,LOC107679478,LOC107674488 other downstream 197330 1164316 ~ 1183588 (-)
G16054 mei1,LOC107674470,LOC107731661 other downstream 228158 1147589 ~ 1152760 (-)
LOC122329780 mei1,LOC107674482,LOC107561079,LOC107674470 other downstream 231025 1134810 ~ 1149893 (-)
G16048 NA other downstream 266216 1109491 ~ 1114702 (-)
LOC122332622 LOC107701866 other downstream 305591 1065482 ~ 1075327 (-)
G16172 NA other upstream 237823 1620964 ~ 1652366 (-)
zc3h7ba LOC107563727,LOC107672930,LOC107722838,LOC107572808 other upstream 405104 1788245 ~ 2000474 (-)
LOC122333107 NA other upstream 463551 1846692 ~ 1850280 (-)
pkn1b LOC107672927,LOC107755614,LOC107742419 other upstream 799385 2182526 ~ 2210233 (-)
G16402 ubn2b,LOC107567211,LOC107677340,LOC107741349,LOC107696333 other upstream 920186 2303327 ~ 2362399 (-)

Expression


Co-expression Network