LOC122330746


Basic Information

Item Value
gene id LOC122330746
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1453240 ~ 1455060 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006248079.1
ATGAATTAGCCATTTCAATTACTTTTcgaatttcaatttcatttccaattagtattagtatttcaGTTACAATTACTAAATCTGTGAACGCTGGATAAGACAATGTTCCACgcactttttaaaatccatAGTAAACGAAGAAGTGGTGTGTTTTTAGCTCTGAGGGACCTAACTATAATAAAGAGACATGTTCAAACAGATGAAATGTGCGCAGTGGCTTTGAGATCACATGCCATGCACCAGACCGGTTTTACatgttgattaaaaataaacttgcctGGGGCGTAACGTAACCTCTCATCGGAGCATGAAACAAACACGTATAGGACACACTATTACAGAATATTGTTTAAAGCTGAAGTGAATATGAACGCATGTAGATGGACGGGCTTCGGGTGAGCTGAAGGACATTCAGAGACGATGGCTGACAGAGAAGGCAGATCGGGTGATCGGAGGACCAGGGAAAGACGTGAAAGGAGCCAGAGCATGGGAGAACGTCCCATGAtGGACAGTAGTGCAGATTTGGATAGCCCTGACAGTAAGTAAAAGAagtgtgatatttttatatttttaatgagctgTGAGTGACGCCTGCTAATACATAAATTTAGATATTAGAagtatttagacatttttgatgagctctaatgtcacatggactacttTTAACAATGTCCTGGGTCGGGGAATATTCCCTTTAATTATAAGTtcttaatactttattttatatttaaagctgctgtccataacgtttttattatttcggATTATAAACGATCCAAAATTAATTTCTGGCCAAGTACGtaaccagccagtgttcaaaacctTCAAAATCTCCTCACCTTAGCCCAATTCACaactgtcaccaagccagcagagggagctcttacccctgggtgatctgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006248079.1 True 905 lncRNA 0.39 3 1453240 1455060

Neighbor

gene id symbol gene type direction distance location
LOC122330283 NA coding downstream 70099 1380918 ~ 1383141 (-)
LOC122329932 NA coding downstream 92476 1353090 ~ 1360764 (-)
LOC122332690 LOC107705851 coding downstream 179993 1270753 ~ 1273247 (-)
LOC122330270 NA coding downstream 184979 1263688 ~ 1268261 (-)
LOC122332678 NA coding downstream 189814 1262114 ~ 1263426 (-)
LOC122330636 si:dkey-217f16.5,tmem184bb,LOC107745530,LOC107722689,LOC107573503 coding upstream 28925 1483985 ~ 1491750 (-)
tnrc6bb.1 LOC107745528,LOC107672922,LOC107722687 coding upstream 37483 1492543 ~ 1507468 (-)
LOC122329710 LOC107564877 coding upstream 75352 1530412 ~ 1538308 (-)
zmp:0000000896 zmp:0000000896,LOC107745527,LOC107672931,LOC107563726,LOC107564880,LOC107711547,LOC107691081 coding upstream 83631 1538691 ~ 1550787 (-)
LOC122329992 NA coding upstream 127028 1582088 ~ 1585707 (-)
G16125 NA non-coding downstream 19429 1430753 ~ 1433811 (-)
G16084 NA non-coding downstream 122058 1255055 ~ 1331182 (-)
G16100 NA non-coding downstream 125249 1326319 ~ 1327991 (-)
G16094 NA non-coding downstream 161619 1290881 ~ 1291621 (-)
LOC122330712 NA non-coding downstream 179040 1273288 ~ 1274200 (-)
G16159 NA non-coding upstream 102342 1557402 ~ 1557841 (-)
G16161 NA non-coding upstream 110133 1565193 ~ 1578960 (-)
LOC122330691 NA non-coding upstream 131781 1586841 ~ 1588429 (-)
G16170 NA non-coding upstream 162188 1617248 ~ 1647616 (-)
G16171 NA non-coding upstream 164847 1619907 ~ 1865318 (-)
LOC122330455 kdelr3,LOC107731665,LOC107563718,LOC107679478,LOC107674488 other downstream 269652 1164316 ~ 1183588 (-)
G16054 mei1,LOC107674470,LOC107731661 other downstream 300480 1147589 ~ 1152760 (-)
LOC122329780 mei1,LOC107674482,LOC107561079,LOC107674470 other downstream 303347 1134810 ~ 1149893 (-)
G16048 NA other downstream 338538 1109491 ~ 1114702 (-)
LOC122332622 LOC107701866 other downstream 377913 1065482 ~ 1075327 (-)
G16172 NA other upstream 165904 1620964 ~ 1652366 (-)
zc3h7ba LOC107563727,LOC107672930,LOC107722838,LOC107572808 other upstream 333185 1788245 ~ 2000474 (-)
LOC122333107 NA other upstream 391632 1846692 ~ 1850280 (-)
pkn1b LOC107672927,LOC107755614,LOC107742419 other upstream 727466 2182526 ~ 2210233 (-)
G16402 ubn2b,LOC107567211,LOC107677340,LOC107741349,LOC107696333 other upstream 848267 2303327 ~ 2362399 (-)

Expression


Co-expression Network