G16171


Basic Information

Item Value
gene id G16171
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1619907 ~ 1865318 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24037
TGGCTTTTCAACTCCAAAGTAGTGCGTTTTAATGGTTAAACCTCTGATTCAGACACTTTAAAGATTCACTGAGACGAACGCCATAAAAGTTCCTGAACCTCGACACGTTTAATGAGAAAGCCCATAAAACAAAtctgatttacatttttcaccCATTTCACAAGCATCTTTCTTCTTCAAACCTTTATGTACACAAACCACAGTAACACCATCACATTAAATTACAcccaaacaacaaaacaagagctcaaaaacattcatccagtgttttaaaggcaaaaaagagagaaaaacctCACAAAGTTGTGCAAATCCACATTGACAACTCAATTTCAGGTCCCCTTCGTTTGAAAtgttatgaaaaacaaaaaaaaaagtgccaAGACTTCAAATAAAGAATGTTTGTCTGAAATTTTGAATTCTGTTACCATAGTAACCAAAGGTAACATTCTATTCTAAAGTATGTAACACGGCAACCAGCTATTCACTTCCTGTCTGCCCAGTCATTTGAATGTGTAGTTTATCAATAAAGAATTGctatattaaatatcatatatataaatatgtaatatataatgcttttatttgtatttatcgATCATCCTACCTGAACATACTCTCTCATCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24037 True 628 lncRNA 0.35 2 1619907 1865318

Neighbor

gene id symbol gene type direction distance location
LOC122330436 NA coding downstream 9057 1607064 ~ 1610850 (-)
LOC122332889 LOC107575231,LOC107572359,LOC107722878,LOC107709162 coding downstream 33396 1585711 ~ 1586511 (-)
LOC122329992 NA coding downstream 34200 1582088 ~ 1585707 (-)
zmp:0000000896 zmp:0000000896,LOC107745527,LOC107672931,LOC107563726,LOC107564880,LOC107711547,LOC107691081 coding downstream 69120 1538691 ~ 1550787 (-)
LOC122329710 LOC107564877 coding downstream 81599 1530412 ~ 1538308 (-)
LOC122330004 NA coding upstream 95411 1960729 ~ 1975195 (-)
LOC122330083 LOC107691092,LOC107722836,LOC107572810 coding upstream 112837 1978155 ~ 1983117 (-)
LOC122329915 NA coding upstream 145224 2010542 ~ 2042422 (-)
LOC122329936 NA coding upstream 164047 2029365 ~ 2036345 (-)
slc25a38a slc25a38a,LOC107745513,LOC107672904,LOC107751976,LOC107572806,LOC107563742,LOC108439114 coding upstream 184853 2050171 ~ 2056023 (-)
LOC122330691 NA non-coding downstream 31478 1586841 ~ 1588429 (-)
G16161 NA non-coding downstream 40947 1565193 ~ 1578960 (-)
G16159 NA non-coding downstream 62066 1557402 ~ 1557841 (-)
LOC122330746 NA non-coding downstream 164847 1453240 ~ 1455060 (-)
G16125 NA non-coding downstream 186096 1430753 ~ 1433811 (-)
G16179 NA non-coding upstream 5443 1870761 ~ 1873526 (-)
G16212 NA non-coding upstream 64726 1930044 ~ 1937758 (-)
G16217 NA non-coding upstream 135956 2001274 ~ 2001571 (-)
G16385 NA non-coding upstream 259998 2125316 ~ 2125718 (-)
LOC122342126 NA non-coding upstream 270751 2136069 ~ 2140359 (-)
LOC122330455 kdelr3,LOC107731665,LOC107563718,LOC107679478,LOC107674488 other downstream 436319 1164316 ~ 1183588 (-)
G16054 mei1,LOC107674470,LOC107731661 other downstream 467147 1147589 ~ 1152760 (-)
LOC122329780 mei1,LOC107674482,LOC107561079,LOC107674470 other downstream 470014 1134810 ~ 1149893 (-)
G16048 NA other downstream 505205 1109491 ~ 1114702 (-)
LOC122332622 LOC107701866 other downstream 544580 1065482 ~ 1075327 (-)
pkn1b LOC107672927,LOC107755614,LOC107742419 other upstream 317208 2182526 ~ 2210233 (-)
G16402 ubn2b,LOC107567211,LOC107677340,LOC107741349,LOC107696333 other upstream 438009 2303327 ~ 2362399 (-)
trir c12h19orf43,LOC107677344,LOC107575051,LOC107567214 other upstream 449241 2314559 ~ 2374087 (-)
LOC122341602 junbb,LOC107741351,LOC107567221,LOC107568144,LOC107696348,LOC107726104 other upstream 468238 2333556 ~ 2423546 (-)
G16421 LOC107572279,LOC107572278,LOC107668191,LOC107569684,LOC107574181,LOC107574114 other upstream 578750 2444068 ~ 2450203 (-)

Expression


Co-expression Network