G16179


Basic Information

Item Value
gene id G16179
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1870761 ~ 1873526 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24051
tcactGTTTTCAtgattgtgcattttatttgtatagattttttcttactcaccacaaaagaaaaGcttgtattcattcattcattcattggttGAATCAAAGTGaggaaaaaaccaaaaaaaaacaagattacaAAAACGTTGGTTGACAGCGATGCTCAAATACTATCAAAGGCACTTGTGAGTCAGTTCCCTGAGAGAAGAGATCTGAGAAACAGCAGAGTCGTCAAACAACACATAACTGTTTACATTCAAACATTTCTGCTCGTGTTGTTCGCTCGCATCTTTgactagattttaaaaaatgacaacaatacTGACGTTCTCCTTTTAAAGATGTTCATCTGTGTTGCGTTAATTTATGGAAACCCATTTCTACCACGACATAAAAGTCATGCTTCAGTAAATCATCAAAACAGTCAAAATTTAgacataaatcatatttatgagatgaaagtcagaattatgacataccaataaacatttatgttaaattaaaaaactaaatcatattGAGTcctattatgtaaattattatttttttgcctgtTCTGACTTGATACGCCAATTTTGGCCGAGTATGTCATAATTTAAGTCATGTCTTACCCTGTCAGTTACAACCTGCATGTCatcatttcctcttttttcctcGAAATTATAACTTACTTTATCGTACTACATTTTCAcctcaattttaacatttttgacttTACCTCAAAATCAGGATTATGCATATTTTACGTAGTACCATACTATATTTTGACGTTTTACCTCACAGTTATGACTTTCAACCCAGTTTACCGTAATTAAACATGTTACCTCGTAGGTTTGTCGGTTTTAACTGCGTTTTATAATTCCACTTTTTTCCTCGTGTGTGTGACATCGTAACATtgacattttatcttttatcaaTTTGGACTTGCATATATCTTATTTCCAGTAACTGATTATTTATGgtaattctaaattaaaatttttttttttttttttatcctgcgTGATGGAAATGGGCAACAAAACATGGTTTCCTCAATATAGCAATCAAAAGAGAAGTAAAAAGTCCTGGACTGATTGTCACGTGGCAGCTGTAGAGTTCTGTGCTGATTTTATGGATCAAATTAATCGTCGCATGGAAAGATTGAAGGGTTCGTGTGCTCTGCGCAGAGAAATCCCATGATCCTCAGGGGCGGAAGAGCTGCGGCTGCATCAGGACGAAAGCTGAAGTTGTATTTGGGAGGAAGACCCTGATGGGACGTGCTGTTGAACGCCTCCCAGGAGAAGACGGGAAGCCCTCCGTCTGTAGTCGGCCCGTTCACCGCCTCGGCCGTGAACTCCTCCGCCATGTGCAGATCCG

Function

GO:

id name namespace
GO:0004520 endodeoxyribonuclease activity molecular_function
GO:0004536 deoxyribonuclease activity molecular_function

KEGG:

id description
ko04142 Lysosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU24051 True 1353 lncRNA 0.37 2 1870761 1873526

Neighbor

gene id symbol gene type direction distance location
tefb tef,LOC101073097 coding downstream 163117 1702567 ~ 1707644 (-)
polr3h polr3h,rpc8,LOC107672915,LOC107734710,LOC107691087,LOC107745521,LOC106601238 coding downstream 176709 1691319 ~ 1694052 (-)
csdc2b csdc2,LOC107672917,LOC107745522,LOC107691088,LOC108272855,LOC107734809 coding downstream 179582 1687167 ~ 1691179 (-)
gucy2ca gucy2c,LOC107672912,LOC107745524,LOC107563725 coding downstream 190562 1663665 ~ 1680199 (-)
LOC122330436 NA coding downstream 259911 1607064 ~ 1610850 (-)
LOC122330004 NA coding upstream 87203 1960729 ~ 1975195 (-)
LOC122330083 LOC107691092,LOC107722836,LOC107572810 coding upstream 104629 1978155 ~ 1983117 (-)
LOC122329915 NA coding upstream 137016 2010542 ~ 2042422 (-)
LOC122329936 NA coding upstream 155839 2029365 ~ 2036345 (-)
slc25a38a slc25a38a,LOC107745513,LOC107672904,LOC107751976,LOC107572806,LOC107563742,LOC108439114 coding upstream 176645 2050171 ~ 2056023 (-)
G16171 NA non-coding downstream 5443 1619907 ~ 1865318 (-)
LOC122330783 NA non-coding downstream 49403 1820617 ~ 1821358 (-)
LOC122330758 NA non-coding downstream 73006 1796712 ~ 1797755 (-)
LOC122330697 NA non-coding downstream 91734 1776314 ~ 1779027 (-)
G16184 NA non-coding downstream 215713 1654314 ~ 1655048 (-)
G16212 NA non-coding upstream 56518 1930044 ~ 1937758 (-)
G16217 NA non-coding upstream 127748 2001274 ~ 2001571 (-)
G16385 NA non-coding upstream 251790 2125316 ~ 2125718 (-)
LOC122342126 NA non-coding upstream 262543 2136069 ~ 2140359 (-)
G16393 NA non-coding upstream 365772 2239298 ~ 2240445 (-)
LOC122333107 NA other downstream 20481 1846692 ~ 1850280 (-)
G16172 NA other downstream 218395 1620964 ~ 1652366 (-)
LOC122330455 kdelr3,LOC107731665,LOC107563718,LOC107679478,LOC107674488 other downstream 687173 1164316 ~ 1183588 (-)
G16054 mei1,LOC107674470,LOC107731661 other downstream 718001 1147589 ~ 1152760 (-)
LOC122329780 mei1,LOC107674482,LOC107561079,LOC107674470 other downstream 720868 1134810 ~ 1149893 (-)
pkn1b LOC107672927,LOC107755614,LOC107742419 other upstream 309000 2182526 ~ 2210233 (-)
G16402 ubn2b,LOC107567211,LOC107677340,LOC107741349,LOC107696333 other upstream 429801 2303327 ~ 2362399 (-)
trir c12h19orf43,LOC107677344,LOC107575051,LOC107567214 other upstream 441033 2314559 ~ 2374087 (-)
LOC122341602 junbb,LOC107741351,LOC107567221,LOC107568144,LOC107696348,LOC107726104 other upstream 460030 2333556 ~ 2423546 (-)
G16421 LOC107572279,LOC107572278,LOC107668191,LOC107569684,LOC107574181,LOC107574114 other upstream 570542 2444068 ~ 2450203 (-)

Expression


Co-expression Network