G16393


Basic Information

Item Value
gene id G16393
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2239298 ~ 2240445 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24391
TTGAGCGTTGAGGACCCTATtaaacgtctctctctctctctgcacgCCAAAGTTAGTTCATCGGTGTAGAAAACCCTTCTGAACCGGGCCGTGTTTGTTCGAGGGAGGTGTTTCTATCTCGGGCTCGTGTTGCCCGGCTGCAGGGCCGACCGCTGGCATCAGAGAGCGGGGGAACAATCAGATAAATATCACAGGAAGTGAGTGGCGGCTCAAAGGCCCCTCCCCTTCCTGCCGTCTCTCGCCGCGAGGGTCAGGATATTTCCTCCCTTTGTGCGCGCTCCCGAAAGGGGCCAAAAGCGTCCGGCGGCCAACAACACTCGTGTTCGAGGGGCCTCTGAAATGTCACCCCTTTATTTCGCCCGGATCCTCTGCTGTTGCTAGGCGTGAGGTCATCGCGCCGCTCCGAACGCTCTATGACGTCATAAGTTGAGGTTCTAGCGACGTGCGACAGACCCAGACCCGTGTACGGGAGCCTGTTCAGACCGACATGTGACTGTAATTAAACGACGAGGTTGAACATTAAACAGAAGTAAGAAAACATGAGCTAATATAATTGCCATTGACTTCCCTATTCAATTTTGCAATGATATTATAAGacatgtgatatatatatatatatatatattgcatgcatGCATCAGAAATGCATCGGTTTCTGCTGGAGGAGCGTTTACATGCAGCTTTGTTTGTCAGAAAATGAGAcagagaggcagacagacacGCCGAAAGCCCACCCTGCGTCCCACCGTCTGAACAgcgccagagagagagagagagagagaggaagacaaAGGCTTGTGTGAGAGCAGCAGCAGTCTGGAGGCTTCTCCGGAGCGTCTGGGAAAGAGGGGCAGAGTTCAGTGAGCTCACACAGGTGTCTTCAATCGTTAGGCCGAACGCGGTCTGCttttaaacacttattttacCCCCGATGCTGAAAATGATGTGTGCAGGCATGTGCTGCTCACCaagtggaggaaaaaaaataatccgAAGCGTAAATAATACAATGACAGTCGTGAAAGTAAATAGGTGTGTCAGGCTttaaagaggaggaggaaatgCTGCCAAAATCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24391 True 1078 lncRNA 0.43 2 2239298 2240445

Neighbor

gene id symbol gene type direction distance location
wu:fb95e10 LOC107672920,LOC107563751,LOC107755615,LOC107696329 coding downstream 1052 2212166 ~ 2238246 (-)
engl LOC107755613,LOC107563770,LOC107575003 coding downstream 62345 2165727 ~ 2176953 (-)
si:ch211-106h11.1 LOC107755611,LOC107672936,LOC107563749 coding downstream 84270 2148296 ~ 2155028 (-)
ddx39ab ddx39ab,ddx39,ddx39b,LOC107708265,LOC107691101,LOC107563747 coding downstream 91153 2142234 ~ 2148145 (-)
LOC122341690 NA coding downstream 113124 2118867 ~ 2126174 (-)
mcoln1b mcoln1b,LOC107672921,LOC107755617 coding upstream 3446 2243891 ~ 2253448 (-)
LOC122341666 NA coding upstream 30153 2270598 ~ 2290362 (-)
LOC122341596 slc25a38a,LOC107572806,LOC107745513,LOC107672904,LOC107751976 coding upstream 75569 2316014 ~ 2318047 (-)
hook2 hook2,LOC107677331,LOC107696339 coding upstream 134168 2374613 ~ 2391111 (-)
rtbdn zgc:109949,LOC107741352,LOC107677336,LOC107567222,LOC107696350,LOC107568146 coding upstream 187500 2427945 ~ 2435535 (-)
LOC122342126 NA non-coding downstream 98939 2136069 ~ 2140359 (-)
G16385 NA non-coding downstream 113580 2125316 ~ 2125718 (-)
G16217 NA non-coding downstream 237727 2001274 ~ 2001571 (-)
G16212 NA non-coding downstream 301540 1930044 ~ 1937758 (-)
G16179 NA non-coding downstream 365772 1870761 ~ 1873526 (-)
LOC122341671 NA non-coding upstream 22226 2262671 ~ 2265631 (-)
G16400 NA non-coding upstream 55662 2296107 ~ 2355467 (-)
G16401 LOC107696333,LOC107741349,LOC107749601,LOC107575050,LOC107575170 non-coding upstream 58592 2299037 ~ 2358165 (-)
LOC122341603 NA non-coding upstream 61744 2302189 ~ 2320322 (-)
G16403 LOC107678214,LOC107706618,LOC107581313 non-coding upstream 64804 2305249 ~ 2364569 (-)
pkn1b LOC107672927,LOC107755614,LOC107742419 other downstream 29065 2182526 ~ 2210233 (-)
zc3h7ba LOC107563727,LOC107672930,LOC107722838,LOC107572808 other downstream 238824 1788245 ~ 2000474 (-)
LOC122333107 NA other downstream 389018 1846692 ~ 1850280 (-)
G16172 NA other downstream 586932 1620964 ~ 1652366 (-)
LOC122330455 kdelr3,LOC107731665,LOC107563718,LOC107679478,LOC107674488 other downstream 1055710 1164316 ~ 1183588 (-)
G16402 ubn2b,LOC107567211,LOC107677340,LOC107741349,LOC107696333 other upstream 62882 2303327 ~ 2362399 (-)
trir c12h19orf43,LOC107677344,LOC107575051,LOC107567214 other upstream 74114 2314559 ~ 2374087 (-)
LOC122341602 junbb,LOC107741351,LOC107567221,LOC107568144,LOC107696348,LOC107726104 other upstream 93111 2333556 ~ 2423546 (-)
G16421 LOC107572279,LOC107572278,LOC107668191,LOC107569684,LOC107574181,LOC107574114 other upstream 203623 2444068 ~ 2450203 (-)
LOC122341591 NA other upstream 238683 2479128 ~ 2484230 (-)

Expression


Co-expression Network