LOC122329936


Basic Information

Item Value
gene id LOC122329936
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2029365 ~ 2036345 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043226649.1
CGTTCCCAGAGGGCTCTTCTCTTCGACCGGCAGGGATGTGAAACGCCGCGAACTTCAGGTCTAAGGATCATCTTTCAAACCCTTCAAATGTCGCAGGAATCAAAGCGTTAGAACGCGCTGTTTGTGAGGATTTTCTCCATTCAGGTCACGGGTGCATTTTACAGtGAAATGGCAGAAGCTAGTATTTTGTGTACTGAAGATCAGTTTAGATGTCCAGTGTGTCTGGATCTGCTGAAGGATCCAGTGACGATTCCCTGCGGACACACTTACTGCATGAGATGCATCTCAAGCTGCTGGGACCAGGAGGATTGGAAAGGACTCTACAGCTGTCCTCAATGCAGAAAAGCCTTCATGCTAAGACCAGTTTTATATAAGAATGTGGTGTTTGCTGAAATGGTGGAGAAACTGAAGATGACGAGGCTTCAAACTGCTTTTCCTGCAGTTCATCAAACAGGATCTGGAGATGTTCATTGCAACTACTGCACTGAAATTAAACAGAAAGCTGTGAAATCCTGTCTGGAGTGTCGAATCTCTTACTGTCAAAGTCATCTTGAATGCCATGAGAATCTCTTCAGTGGTCAAAAACACAATCTGATGGATGCCACTGCACGACTGTGGGAGATCATCTGCCCTCAACATAATAAACTGCTGGAGATCTACTGCCGTACCGATGAGCGTTGCATCTGTATGCAGTGTTTGGTGGATGAACACAAAAATCATGACACCGTATCAACTGCTGCAGTGAGGACAGAGAAACAGAGATTTTTTGAGGAAACACTGATCGAAATACAGACGGTAATCCAGCAGAGGCAGCTAAAGCTGAGAAAGGCTGTGGCATCTCATAAGTGCTTTGCGCAGACAGCGGTGGAGGACAGCGAGAGGATCTTCACCGAACTCATCCGCTCCATTGAGAAACGTCGCTCTGAGGCGACGCAGCTGATCAGAGATCAGGAAAGAGCTGTAATGAATCGAGCTGAAAGACGACTTAAACAACTGGAGCTGGAGCTGGATGAAGTCAGGTGGAGAGGTGCTGAGATAAAGCAGCTCACAGAAACACAGGATCATGTTCGTTTTCTTCAGAGTTTgtcgtctgtctctctccctggATCTACAGATGACTTCGCTGTCAGTTCTGATCTCTCTTTGGATGCTGTAGTAAACACTGCGTCTCAGCTCAGAGATGTGCTGCAGCAGCTCTCCAGAGAGACTATAGAAAACATATCTGCAAGAGTGAAGACCGTTCGGGTCATTGGCACTCCTGAATATCAGACCAGAAAGGAGTTTCTACAATATTCCTGTCAGCTGACTTTGGATCCGAACTCAGTGAATTATTTCCTCCGTCTGTCTGAGGGAAACCGAGTAATTACGGTCTCCGACACCAAACAACATTATCCTGaccatccagacagatttgatcaCTGGTGGCAAGCATTGTGTCGAGAGAGTATGACTGGATGCTGTTATTGGGAAGTGGAGTGGAGCAGCAAAGAGCCATCGGGAGTGGATATAGGAGTAACATACGAGAGCATCAGCAGGAAGGGGAACATCCCTGAGAGTGTAGCTGGGtgtaatgatcagtcctggagatTGTACTGCACTCCTTTCTGTTGCTCGTTCTGGCACAAGAACACAGAATACGTTCTTCCAGTACTCAATATCTCCAgtagagtaggagtgtatgtggatcaCAGCGCAGggactctgtccttctacagcgtctcaGACACAATGAGTCTCATCCACAGAGTCCAGACCATATTCACTCAGCCGCTGTATGCTGTGTTTGGACTAGATAGCAACTCAAGGGTGAAACTGTGTTATCTGTAGGGGTGGGAGAAAAACGTAATGAatcttcttttttaatttttcctaAGAGGTGGTGgagaaaagctttttaattCCCATCAGAGGGCTAAATGTATAGATGCCGCACTGAAAGCGAAAATCACGAGGGAGGCAGTGGATCAAACCTCTTCCTGAAATCTTCTGCGCATTTTTGATTTTACACACTACCAGGAAAACTTAACTAAACACGACAAgccttgtgtgtgtttgtgtgatgttTGTATGTTCCTCAGAGATGTTCATTCTCCTGCCGGGCTGTTATTgcaaataagaaattgttctaAATAGGTACACATAGTAAcataacactttcattttactcgagaatgtatttttctactctatgtttttttttaatcagggtTGTGGTACTTGAAAGTTTCGTGGTTCAAGGTACTTTAAACACACgctgtgtatgtgtatgctcctaaaatatatgtttagtAAGATAAGAA

Function

GO:

id name namespace
GO:0006950 response to stress biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043226649.1 True 2300 mRNA 0.45 7 2029365 2036345

Neighbor

gene id symbol gene type direction distance location
LOC122330083 LOC107691092,LOC107722836,LOC107572810 coding downstream 46248 1978155 ~ 1983117 (-)
LOC122330004 NA coding downstream 54170 1960729 ~ 1975195 (-)
tefb tef,LOC101073097 coding downstream 321721 1702567 ~ 1707644 (-)
polr3h polr3h,rpc8,LOC107672915,LOC107734710,LOC107691087,LOC107745521,LOC106601238 coding downstream 335313 1691319 ~ 1694052 (-)
csdc2b csdc2,LOC107672917,LOC107745522,LOC107691088,LOC108272855,LOC107734809 coding downstream 338186 1687167 ~ 1691179 (-)
slc25a38a slc25a38a,LOC107745513,LOC107672904,LOC107751976,LOC107572806,LOC107563742,LOC108439114 coding upstream 13826 2050171 ~ 2056023 (-)
LOC122341490 myh9,LOC107745511,LOC107751969,LOC107672897,LOC107572814,LOC100380669,LOC106601336 coding upstream 20501 2056846 ~ 2102005 (-)
txn2 txn2,LOC107745512 coding upstream 73686 2110031 ~ 2115420 (-)
LOC122341690 NA coding upstream 82522 2118867 ~ 2126174 (-)
ddx39ab ddx39ab,ddx39,ddx39b,LOC107708265,LOC107691101,LOC107563747 coding upstream 105889 2142234 ~ 2148145 (-)
G16217 NA non-coding downstream 27794 2001274 ~ 2001571 (-)
G16212 NA non-coding downstream 91607 1930044 ~ 1937758 (-)
G16179 NA non-coding downstream 155839 1870761 ~ 1873526 (-)
LOC122330783 NA non-coding downstream 208007 1820617 ~ 1821358 (-)
LOC122330758 NA non-coding downstream 231610 1796712 ~ 1797755 (-)
G16385 NA non-coding upstream 88971 2125316 ~ 2125718 (-)
LOC122342126 NA non-coding upstream 99724 2136069 ~ 2140359 (-)
G16393 NA non-coding upstream 202953 2239298 ~ 2240445 (-)
LOC122341671 NA non-coding upstream 226326 2262671 ~ 2265631 (-)
G16400 NA non-coding upstream 259762 2296107 ~ 2355467 (-)
zc3h7ba LOC107563727,LOC107672930,LOC107722838,LOC107572808 other downstream 28891 1788245 ~ 2000474 (-)
LOC122333107 NA other downstream 179085 1846692 ~ 1850280 (-)
G16172 NA other downstream 376999 1620964 ~ 1652366 (-)
LOC122330455 kdelr3,LOC107731665,LOC107563718,LOC107679478,LOC107674488 other downstream 845777 1164316 ~ 1183588 (-)
G16054 mei1,LOC107674470,LOC107731661 other downstream 876605 1147589 ~ 1152760 (-)
pkn1b LOC107672927,LOC107755614,LOC107742419 other upstream 146181 2182526 ~ 2210233 (-)
G16402 ubn2b,LOC107567211,LOC107677340,LOC107741349,LOC107696333 other upstream 266982 2303327 ~ 2362399 (-)
trir c12h19orf43,LOC107677344,LOC107575051,LOC107567214 other upstream 278214 2314559 ~ 2374087 (-)
LOC122341602 junbb,LOC107741351,LOC107567221,LOC107568144,LOC107696348,LOC107726104 other upstream 297211 2333556 ~ 2423546 (-)
G16421 LOC107572279,LOC107572278,LOC107668191,LOC107569684,LOC107574181,LOC107574114 other upstream 407723 2444068 ~ 2450203 (-)

Expression


Co-expression Network