txn2 (txn2,LOC107745512)


Basic Information

Item Value
gene id txn2
gene name txn2,LOC107745512
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2110031 ~ 2115420 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235232.1
GCGCGCGCCGCTGTGACGCAGCAGCTGCGCGCGAGCGGAAGTACGTCAGGGGTCCTTGTGACCAGAGGTCTCCGGAGCTCACGATGGCGTTCAGGCTGCTGGCTCGGAGGGTTTGTGGGCTTTCCGTCAGGGATGCGAGGCGTCCGCCGGCCGCCGTCTGGTGCTCCTCGTCCTTCTCCTCGGCTCTGAGCCCGTCTCCGGCGCTGCTCCCGCTCCCGCGCCTCCTCCCGCTGTCCTCCCGCAGGAGCGTGTCCTTCAACGTGCAGGACCACGACGACTTCACCGACCGAGTCATCAACAGCCAGCTGCCCGTCCTCGTCGACTTCCACGCGCAGTGGTGTGGTCCGTGTAAGATCCTCGGCCCGCGGCTGGAGAAGGCCATCGCCAAGCAGAAGGGCCGCGTGACCATGGCCAAAGTCGACATCGACGAACACACGGACCTCGCCATCGAGTACGGGGTGTCGGCGGTTCCCACGGTGATCGCCATGCGCGGCGGCGATGTCATCGACCAGTTCGTGGGCATCAAAGACGAAGACCAGCTGGATTCTTTTGTGCAGAAGCTGATTGGACAGTGAAGCTGTCAGTCAAACCCGCCTAGCCCCGCCCACCTCCCCACGGAAACTCCATTACGTTTCATTACAGACTCGGACAAACTGCACCATCTCTCCTGCTTTccttaactgtgtgtgtgtgtgtgtgtgttttagagggTCTGTGGCAGTGTTTTACCGCGGTTAAAGTGTAGTAAAGTGTTCTGGGACGTCCCGTAGCTGCTGAGGAGAACTGAAGGATGGACGCTTCCTCACGCGCCGCTCTTTTACACCTGAATGCCTGCTAATGTGAAAGTGTGTGCGGATCACGAGCCTTTGTTTCCGTTccctttgctttcttttctttttttttccgaTCTGACTGTGAATTTTTTGCGCAGGATGCATGGGATCGATGACGGCTTTGTTTAGACTttaactcatatatatatatatatatatatatggtaatatAACCAACTAGTCAggtgaaattatgaataaagcAACTGTACTGTATTTA
>XM_043235234.1
TGCGCGCGAGCGGAAGTACGTCAGGGGTCCTTGTGACCAGAGGTCTCCGGAGCTCACGGTCTGTCTGTGGTGTAGATGGCGTTCAGGCTGCTGGCTCGGAGGGTTTGTGGGCTTTCCGTCAGGGATGCGAGGCGTCCGCCGGCCGCCGTCTGGTGCTCCTCGTCCTTCTCCTCGGCTCTGAGCCCGTCTCCGGCGCTGCTCCCGCTCCCGCGCCTCCTCCCGCTGTCCTCCCGCAGGAGCGTGTCCTTCAACGTGCAGGACCACGACGACTTCACCGACCGAGTCATCAACAGCCAGCTGCCCGTCCTCGTCGACTTCCACGCGCAGTGGTGTGGTCCGTGTAAGATCCTCGGCCCGCGGCTGGAGAAGGCCATCGCCAAGCAGAAGGGCCGCGTGACCATGGCCAAAGTCGACATCGACGAACACACGGACCTCGCCATCGAGTACGGGGTGTCGGCGGTTCCCACGGTGATCGCCATGCGCGGCGGCGATGTCATCGACCAGTTCGTGGGCATCAAAGACGAAGACCAGCTGGATTCTTTTGTGCAGAAGCTGATTGGACAGTGAAGCTGTCAGTCAAACCCGCCTAGCCCCGCCCACCTCCCCACGGAAACTCCATTACGTTTCATTACAGACTCGGACAAACTGCACCATCTCTCCTGCTTTccttaactgtgtgtgtgtgtgtgtgtgttttagagggTCTGTGGCAGTGTTTTACCGCGGTTAAAGTGTAGTAAAGTGTTCTGGGACGTCCCGTAGCTGCTGAGGAGAACTGAAGGATGGACGCTTCCTCACGCGCCGCTCTTTTACACCTGAATGCCTGCTAATGTGAAAGTGTGTGCGGATCACGAGCCTTTGTTTCCGTTccctttgctttcttttctttttttttccgaTCTGACTGTGAATTTTTTGCGCAGGATGCATGGGATCGATGACGGCTTTGTTTAGACTttaactcatatatatatatatatatatatatggtaatatAACCAACTAGTCAggtgaaattatgaataaagcAACTGTACTGTATTTA

Function

symbol description
txn2 Predicted to enable protein-disulfide reductase activity. Predicted to act upstream of or within cell redox homeostasis and glycerol ether metabolic process. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 29. Orthologous to human TXN2 (thioredoxin 2).

NR:

description
PREDICTED: thioredoxin, mitochondrial-like

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0006662 glycerol ether metabolic process biological_process
GO:0015035 protein disulfide oxidoreductase activity molecular_function

KEGG:

id description
K03671 trxA; thioredoxin 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235232.1 True 1053 mRNA 0.56 4 2110031 2115420
XM_043235234.1 False 1045 mRNA 0.55 4 2110031 2115395

Neighbor

gene id symbol gene type direction distance location
LOC122341490 myh9,LOC107745511,LOC107751969,LOC107672897,LOC107572814,LOC100380669,LOC106601336 coding downstream 8026 2056846 ~ 2102005 (-)
slc25a38a slc25a38a,LOC107745513,LOC107672904,LOC107751976,LOC107572806,LOC107563742,LOC108439114 coding downstream 54008 2050171 ~ 2056023 (-)
LOC122329915 NA coding downstream 67609 2010542 ~ 2042422 (-)
LOC122329936 NA coding downstream 73686 2029365 ~ 2036345 (-)
LOC122330083 LOC107691092,LOC107722836,LOC107572810 coding downstream 126914 1978155 ~ 1983117 (-)
LOC122341690 NA coding upstream 3447 2118867 ~ 2126174 (-)
ddx39ab ddx39ab,ddx39,ddx39b,LOC107708265,LOC107691101,LOC107563747 coding upstream 26814 2142234 ~ 2148145 (-)
si:ch211-106h11.1 LOC107755611,LOC107672936,LOC107563749 coding upstream 32876 2148296 ~ 2155028 (-)
engl LOC107755613,LOC107563770,LOC107575003 coding upstream 50307 2165727 ~ 2176953 (-)
wu:fb95e10 LOC107672920,LOC107563751,LOC107755615,LOC107696329 coding upstream 96746 2212166 ~ 2238246 (-)
G16217 NA non-coding downstream 108460 2001274 ~ 2001571 (-)
G16212 NA non-coding downstream 172273 1930044 ~ 1937758 (-)
G16179 NA non-coding downstream 236505 1870761 ~ 1873526 (-)
LOC122330783 NA non-coding downstream 288673 1820617 ~ 1821358 (-)
LOC122330758 NA non-coding downstream 312276 1796712 ~ 1797755 (-)
G16385 NA non-coding upstream 9896 2125316 ~ 2125718 (-)
LOC122342126 NA non-coding upstream 20649 2136069 ~ 2140359 (-)
G16393 NA non-coding upstream 123878 2239298 ~ 2240445 (-)
LOC122341671 NA non-coding upstream 147251 2262671 ~ 2265631 (-)
G16400 NA non-coding upstream 180687 2296107 ~ 2355467 (-)
zc3h7ba LOC107563727,LOC107672930,LOC107722838,LOC107572808 other downstream 109557 1788245 ~ 2000474 (-)
LOC122333107 NA other downstream 259751 1846692 ~ 1850280 (-)
G16172 NA other downstream 457665 1620964 ~ 1652366 (-)
LOC122330455 kdelr3,LOC107731665,LOC107563718,LOC107679478,LOC107674488 other downstream 926443 1164316 ~ 1183588 (-)
G16054 mei1,LOC107674470,LOC107731661 other downstream 957271 1147589 ~ 1152760 (-)
pkn1b LOC107672927,LOC107755614,LOC107742419 other upstream 67106 2182526 ~ 2210233 (-)
G16402 ubn2b,LOC107567211,LOC107677340,LOC107741349,LOC107696333 other upstream 187907 2303327 ~ 2362399 (-)
trir c12h19orf43,LOC107677344,LOC107575051,LOC107567214 other upstream 199139 2314559 ~ 2374087 (-)
LOC122341602 junbb,LOC107741351,LOC107567221,LOC107568144,LOC107696348,LOC107726104 other upstream 218136 2333556 ~ 2423546 (-)
G16421 LOC107572279,LOC107572278,LOC107668191,LOC107569684,LOC107574181,LOC107574114 other upstream 328648 2444068 ~ 2450203 (-)

Expression


Co-expression Network