LOC122329710 (LOC107564877)


Basic Information

Item Value
gene id LOC122329710
gene name LOC107564877
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1530412 ~ 1538308 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043226172.1
CTTGAGTTCTGAAGAGTTTCTGAAAGAGTTAGTCttggatgtttgttttttatggcTATGAAAGAGGTTTGCGTTTGGAAAGGGCTCGTTTTAGCCCTTTTCTTCTTTGCTGTTGAAGGACAGAGACCAGGACCATCCTTCTTGGTGTCGTTTCCTGCACTGATTGAGTCTGGCTCCGACGCAAAACTTTGTGCCAGTCTCTTAAATCCCAATGAGAGCCTCACCATTACCATGTTCCTAGTTGATGAGAAAAACGTGACAACACAGCTTGGGCAGCAGAGGTCTTCGACAACGTTTCACAGCTGTTTTAGTTTTCAGGCTCCTCTGGTAGATGGGGAATTGGTGCAGAAATTGAGGGTGATTCTTCAAGGTGGGTTCTTCAAAATGACCGAAGAGAGGAAAGTCATGTTTAGACGTTACATGCCTTTGACCTTCATTCAAACGGACAAACCCCTTTACAACCCAGGACAAACTGTGAACTTCAGAGTTGTGACCATGAATGCTAAACTTGTTCCTTTTGATCAAATGTACAGTCTAGTGGTGGTGGAGGACAGTCAGAGTAACCGGATTGGTCAGTGGGTAAATGTCTCTTCAACGATGTGGATATTGCAGCTTTCTCACCAGTTAAACCCAGAGGCTCAGGTTGGGATGTATACATTGAGGGCCTACATTGGTGACCAAATGTTCTCACAGGTTTTTGAGGTGAAAAAGTATGTTTTACCCAGATTTTCAGTCACTGAAACGGTGCCACAGATGTATAGTGTGGGAGATGTGGGACTGAAAGTTGAGGCTTGTGCCAAATACACATATGGGCAACCTGTACCTGGTCAAGCGTTGGTGGAAGTGTGCCGTGAGCCGTTTCCATACTCTGTGGTACCTGATTTATATCCTGTGTGTATTAATAAAGCCACTAAGATGAACGACACTGGTTGTGCTTCACTTCTCTTCAGTACTTCAGCATTTTTCAACACCAAATTTGAAAATAACCTGCAAGATTCACTTGTGGTTAATATCAATGTCACTGAGCAGGGAACTGATATAAAGATGGTAAAATCCACAACTGTGTCCATTAGCTTTGAAGTTGGCAAGGTTGCGTTTTTGGAGCTGCCTGGGTTCTTTGATTATGGATCATTGATTAATGGAAAGATTTTGGCATCCTATTTTAATGGGACTCCAATTGCAAGCAAGGCAGTGTATCTACTGGATGGTGGCCAGTGGCCCAACAAACTGCTGCTGAATCTGACTACAAACCAAAATGGACTTGCTGCTTTTTCGCTCAAAACTTCTGACTTTCCTAAAGCAGATCTGAATTTGGTGGCAAGTGCAACTGCAACGGTTGTTAATGGTTATAAATCGCCATACTTCAGTATAGATACAAGAATAATATCACTTTCGAAATCTGCTACTCCTGACAACCCAACGTTTAGTGAACTGTCAATAGTGAAGCTTAAGCAGCCCCTGAAATGCAGTGCCAAGTATTCAGTGACCATCAAGTATTCGTTTGTTGGAGAGACTGGTGATTACTCTGCTGACATCATTTATATGGTTTTGTCCAGAGGACTGATTGTGCTGCATGGATTTCAGAAGGTCACAGCGACAGCTTTGAATGCACTTACAAGCGGTACAGTGACGTTTGATCTGTCTGTCAGTGTGGATATGGCTCCAGCAGTGAAGATTTTGGCCTACTGTGTTCTGCCCAGTTATAATGTTGTTACTACAAGTgcatcatttgacactgaaacGTGTTTCCAAAACAAGGTGTCTCTGCAGTTTTCTCCTGCTACAGCGGTTCCTGGTGAAGGAAACTCTTTGAATGTGTCTGCTCAAGCAGGATCTCTGTGTGGCCTCAGTGCTGTTGATCAGAGCGTCCTGATCATGGAGCCAGGAAGACGTCTGAGTGCTCAAGCGgtGTTCAACTTGCTCCTGGCGCAATCACTATCAGATTATCCATCTGGTGTTGAGGATGAACAGGAATGCCTAAATGTTCGACCTCGTCGAGCTGTTCCTGCAGACCAAGCTTATGAAGCTTTCAAGAGTGTGGGGCTGAAGATTGCAACAAATCTGCCAGTCCGAGAACCTCAGTGCCTGACATACAGAGGCCTGAACTACTATCGCAACTTTCATGATGTGTTATTTCGTGAACCTGTAGCCTTTGCAATGGCTGGTGCACCTGCCGTAGGTGAGAGTAGCTCTTTCGATGTGACTGTCAGGACTTATTTTCCAGAAACCTGGATCTGGCAGCTTGCTCAAGTGGGAGACACTGGATCCACACGAGTTCCCTTCACTGTTCCTGACACAATCACCACATGGGAAACGGAGGCGTTCTGTCTGTCCTCCAGAGGTTTTGGTTTGGCTCCTCCTGTTAATCTGACAGCCTTCCAACCCTTCTTCCTGGAGCTCTCCCTGCCTTACTCCATTATTCGTGGGGAGACTTTTGAGCTGAAGGCCACAGTCTTCAACTATCTGTCGAAGTGCATCATgGTGAAAGTAACTCCAGCTCCTTCCTTGGACTTCACTCTTAAACCTTTAACCGACCCATATTCTTCATGTCTCTGTGCTAATGGGAGAAAGACTTTTAAATGGATTCTCTCCGCTTCTGTCCTTGGAGCTATGAATGTGACTGTCAATGCTTCAGCTGAACAATCCCGGAGTCTGTGTGGCACTGAGTTTGTGACCATGCCGGACAGAGGACGCATTGACATGGTCACTCAAAGTCTTGCTGTTCTGCCTGAAGGAGTTGAAAGAATCTTCAACCAGAATTGGTTATTTTGTCCAAAGGGAAGTGTTCTTTCTGAAGATGTAACTTTGACGTTTCCTGCAAATTTGATCCAGGGATCAGCCAAATGCTCAGTTTCAGTCGTTGGGGACATAATGGGTCGCGCACTAAAGAATCTTGGTGACTTGTTACGTATGCCATCTGGCTGTGGAGAACAAAATATGATAGTTCTTGCTCCCAATATTTACATCCTGCAGTACCTGGAAGTCACACACCAACTCACCGCAGCTATCCGACAGACTGCCACTGGTTACCTTCAGAGTGGATACCAAGGACAGCTGAACTACAGGCACAGGGACGGTTCATACAGCACATTTGGTTACGATGAATCCAATACATGGTTGACTGCCTTCGTCATGAGATCTTTTGGTCAAGCAAGGCATTTTGTCTTCATTGATCCAAATGTCCTTCAGAGTGCAAAAGACTGGCTGATCAGCAAGCAGGGTTCAGATGGCTGTTTTATGCAGCAGGGGACTCTATACCACAGTGACATGAAGggtgGTGTTGGTGATAATGTGACCATGACTGGCTACGTTGCTGCATCACTGCTTGAACTAGGAGTCCTTGCCAcgGATCCAGTCATCACCAATGCTCTGTCATGCTTAAAGCCTTTCCTTGGAAACCTGGGAAACACTTATGCCACGGCTCTGCTTGCCTATACCTTTGGTTTGGCTGGCGACACCAGCACTCGAGCACAGCTTTTAGGCTCCTTGAACACACTTGGCATTTCTGAAGGAGCTAAGCTCCATTGGTCTCAAACTACGTCTGGTGATACTCTGGCGGTGGAGATCAGCTCTTATGTGCTGCTGGCGGTTCTCACTGTAAAGCCACTCACAACTGCTAATCTGACCTATGCTAACCGCATTGTCAACTGGCTCGTGGCCCAGCAGAATCCTTATGGAGGCTTTTCCTCTACCCAGgacACAGTGGTGGCTCTTCATGCTCTATCACTGTACGCCGCTCAAGTGTTCAGTGCTGAGAGCTCCAGTACGGTTACTGTACAGTCATCAACTATGACAGAAGTGTATAACTTTGACGTGACTCCGGACAACAGGCTGCTGTATCAGGAGAAACCGCTGAAAAATGTTCCTGGCAAATATAATGTTAAGGCAAAGGGGTCCACCTGTGCGTCTGTGcagGTTGTATGTTTCTACAACATCCCCACACCCAGTAAAGCTGCCAGGACTCTTAGTGTTGAGGTGAAGGCAGTGAGAGACTGTAAAGTAGTGGGAGCTGATCTCTCATTGAACTTCACTGTAAAATACAGTGGTGCAAAACCAACTACTAACATGGTTATTGTGGACCTCAAAGTCCTGTCAGGTTTCACAGCAGACACATCACTGCTTGGATCTCCTCCAGATTCATTTGCGCCACTAGTGCAGCGGGTTGATGCTGAGGATGATCATGTGCTTGTGTATCTGAAAGAGGTACCCAGAGGCATCCCCATGACCTACAGAATTCAGATGAAACAGGTTCTTGCAGTGCAGAATCTCAAGCCAGCAGTCATTGAGGTTTATGACTACTATCAGCCAAggGATTCATTTGAGACCACATACCTGCCCCCGTGTCCATGATTGTGCTTCTAGTCTGGCTAAGGATTTTTATGGtgggaaaacaataaaaaatgaaatgctaa

Function

NR:

description
PREDICTED: alpha-2-macroglobulin-like protein 1 isoform X1

GO:

id name namespace
GO:0005615 extracellular space cellular_component
GO:0004866 endopeptidase inhibitor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043226172.1 True 4412 mRNA 0.46 34 1530412 1538308

Neighbor

gene id symbol gene type direction distance location
tnrc6bb.1 LOC107745528,LOC107672922,LOC107722687 coding downstream 22944 1492543 ~ 1507468 (-)
LOC122330636 si:dkey-217f16.5,tmem184bb,LOC107745530,LOC107722689,LOC107573503 coding downstream 38662 1483985 ~ 1491750 (-)
LOC122330283 NA coding downstream 147271 1380918 ~ 1383141 (-)
LOC122329932 NA coding downstream 169648 1353090 ~ 1360764 (-)
LOC122332690 LOC107705851 coding downstream 257165 1270753 ~ 1273247 (-)
zmp:0000000896 zmp:0000000896,LOC107745527,LOC107672931,LOC107563726,LOC107564880,LOC107711547,LOC107691081 coding upstream 383 1538691 ~ 1550787 (-)
LOC122329992 NA coding upstream 43780 1582088 ~ 1585707 (-)
LOC122332889 LOC107575231,LOC107572359,LOC107722878,LOC107709162 coding upstream 47403 1585711 ~ 1586511 (-)
LOC122330436 NA coding upstream 68756 1607064 ~ 1610850 (-)
gucy2ca gucy2c,LOC107672912,LOC107745524,LOC107563725 coding upstream 125357 1663665 ~ 1680199 (-)
G16124 NA non-coding downstream 49730 1417894 ~ 1480682 (-)
LOC122330746 NA non-coding downstream 75352 1453240 ~ 1455060 (-)
G16125 NA non-coding downstream 96601 1430753 ~ 1433811 (-)
G16084 NA non-coding downstream 199230 1255055 ~ 1331182 (-)
G16159 NA non-coding upstream 19094 1557402 ~ 1557841 (-)
G16161 NA non-coding upstream 26885 1565193 ~ 1578960 (-)
LOC122330691 NA non-coding upstream 48533 1586841 ~ 1588429 (-)
G16170 NA non-coding upstream 78940 1617248 ~ 1647616 (-)
G16171 NA non-coding upstream 81599 1619907 ~ 1865318 (-)
LOC122330455 kdelr3,LOC107731665,LOC107563718,LOC107679478,LOC107674488 other downstream 346824 1164316 ~ 1183588 (-)
G16054 mei1,LOC107674470,LOC107731661 other downstream 377652 1147589 ~ 1152760 (-)
LOC122329780 mei1,LOC107674482,LOC107561079,LOC107674470 other downstream 380519 1134810 ~ 1149893 (-)
G16048 NA other downstream 415710 1109491 ~ 1114702 (-)
LOC122332622 LOC107701866 other downstream 455085 1065482 ~ 1075327 (-)
G16172 NA other upstream 82656 1620964 ~ 1652366 (-)
zc3h7ba LOC107563727,LOC107672930,LOC107722838,LOC107572808 other upstream 249937 1788245 ~ 2000474 (-)
LOC122333107 NA other upstream 308384 1846692 ~ 1850280 (-)
pkn1b LOC107672927,LOC107755614,LOC107742419 other upstream 644218 2182526 ~ 2210233 (-)
G16402 ubn2b,LOC107567211,LOC107677340,LOC107741349,LOC107696333 other upstream 765019 2303327 ~ 2362399 (-)

Expression


Co-expression Network