G16125


Basic Information

Item Value
gene id G16125
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1430753 ~ 1433811 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU23965
AAATTAACATCCATAAACATGTCCTGATCAGATCTGATCCTGGGTCTTCttggtgaattatttatttgtgtgtctgaTGTAAAGCTGTATATTACAGTCGTCTCAGATTAATGAAGTGTTTGGTTCTTGATTGTGTTTTATCAGGTTCTGGTTCACTGATGATGAAGAAAGGATGTGTTCAGTCAGATTCCTGCTGAATCTCTGTGTTGCTGCAGAAGAAACTGACAGAAATACAGGAACAAGATTCTCCAGTCTGCTGTCATCTGTGTGCAGCTACAAAACATTCCCTTTTCCTAAAGAGAGTCATAATCAGACTGATTTCCTGCTGGATCTTTTCTCTCACGTGAAGATCTATGAGACTCAAACAGGCAGGAGTTATCTTCCAGCATTACAGTCAGTATTTCAGTCTCCTGATAAATGGATCTTAGATCTCTCAAAGAGAAA

Function

GO:

id name namespace
GO:0043254 regulation of protein-containing complex assembly biological_process
GO:0044087 regulation of cellular component biogenesis biological_process
GO:0051128 regulation of cellular component organization biological_process
GO:0065003 protein-containing complex assembly biological_process
GO:0008154 actin polymerization or depolymerization biological_process
GO:1902903 regulation of supramolecular fiber organization biological_process
GO:0090066 regulation of anatomical structure size biological_process
GO:0051493 regulation of cytoskeleton organization biological_process
GO:0032956 regulation of actin cytoskeleton organization biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0043933 protein-containing complex subunit organization biological_process
GO:0007015 actin filament organization biological_process
GO:0032970 regulation of actin filament-based process biological_process
GO:0051258 protein polymerization biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0044257 cellular protein catabolic process biological_process
GO:0044265 cellular macromolecule catabolic process biological_process
GO:0030832 regulation of actin filament length biological_process
GO:0030833 regulation of actin filament polymerization biological_process
GO:0051603 proteolysis involved in cellular protein catabolic process biological_process
GO:0030029 actin filament-based process biological_process
GO:0033043 regulation of organelle organization biological_process
GO:0034622 cellular protein-containing complex assembly biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0030041 actin filament polymerization biological_process
GO:0110053 regulation of actin filament organization biological_process
GO:0008064 regulation of actin polymerization or depolymerization biological_process
GO:0032535 regulation of cellular component size biological_process
GO:0032271 regulation of protein polymerization biological_process

KEGG:

id description
ko04612 Antigen processing and presentation
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
TU23965 True 444 lncRNA 0.39 2 1430753 1433811

Neighbor

gene id symbol gene type direction distance location
LOC122330283 NA coding downstream 47612 1380918 ~ 1383141 (-)
LOC122329932 NA coding downstream 69989 1353090 ~ 1360764 (-)
LOC122332690 LOC107705851 coding downstream 157506 1270753 ~ 1273247 (-)
LOC122330270 NA coding downstream 162492 1263688 ~ 1268261 (-)
LOC122332678 NA coding downstream 167327 1262114 ~ 1263426 (-)
LOC122330636 si:dkey-217f16.5,tmem184bb,LOC107745530,LOC107722689,LOC107573503 coding upstream 50174 1483985 ~ 1491750 (-)
tnrc6bb.1 LOC107745528,LOC107672922,LOC107722687 coding upstream 58732 1492543 ~ 1507468 (-)
LOC122329710 LOC107564877 coding upstream 96601 1530412 ~ 1538308 (-)
zmp:0000000896 zmp:0000000896,LOC107745527,LOC107672931,LOC107563726,LOC107564880,LOC107711547,LOC107691081 coding upstream 104880 1538691 ~ 1550787 (-)
LOC122329992 NA coding upstream 148277 1582088 ~ 1585707 (-)
G16084 NA non-coding downstream 99571 1255055 ~ 1331182 (-)
G16100 NA non-coding downstream 102762 1326319 ~ 1327991 (-)
G16094 NA non-coding downstream 139132 1290881 ~ 1291621 (-)
LOC122330712 NA non-coding downstream 156553 1273288 ~ 1274200 (-)
G16064 LOC107711804,LOC107563722,LOC107674484 non-coding downstream 208793 1219664 ~ 1221960 (-)
LOC122330746 NA non-coding upstream 19429 1453240 ~ 1455060 (-)
G16159 NA non-coding upstream 123591 1557402 ~ 1557841 (-)
G16161 NA non-coding upstream 131382 1565193 ~ 1578960 (-)
LOC122330691 NA non-coding upstream 153030 1586841 ~ 1588429 (-)
G16170 NA non-coding upstream 183437 1617248 ~ 1647616 (-)
LOC122330455 kdelr3,LOC107731665,LOC107563718,LOC107679478,LOC107674488 other downstream 247165 1164316 ~ 1183588 (-)
G16054 mei1,LOC107674470,LOC107731661 other downstream 277993 1147589 ~ 1152760 (-)
LOC122329780 mei1,LOC107674482,LOC107561079,LOC107674470 other downstream 280860 1134810 ~ 1149893 (-)
G16048 NA other downstream 316051 1109491 ~ 1114702 (-)
LOC122332622 LOC107701866 other downstream 355426 1065482 ~ 1075327 (-)
G16172 NA other upstream 187153 1620964 ~ 1652366 (-)
zc3h7ba LOC107563727,LOC107672930,LOC107722838,LOC107572808 other upstream 354434 1788245 ~ 2000474 (-)
LOC122333107 NA other upstream 412881 1846692 ~ 1850280 (-)
pkn1b LOC107672927,LOC107755614,LOC107742419 other upstream 748715 2182526 ~ 2210233 (-)
G16402 ubn2b,LOC107567211,LOC107677340,LOC107741349,LOC107696333 other upstream 869516 2303327 ~ 2362399 (-)

Expression


Co-expression Network