LOC122330636 (si:dkey-217f16.5,tmem184bb,LOC107745530,LOC107722689,LOC107573503)


Basic Information

Item Value
gene id LOC122330636
gene name si:dkey-217f16.5,tmem184bb,LOC107745530,LOC107722689,LOC107573503
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1483985 ~ 1491750 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043227830.1
TAACGCGTGTCGGTGTGACGCGGACTCCGGCGTGACGTCACCGGGAGCGGACGCGCGCTCGCGGACGGAGCGCGTCGCGCGGCAGAGCATCGCGCGGGGCTTCGCGGTCCTGAGAGCCGCAGATGAGCGGGATCCTCTGAGTAACATGGCTCTGCTGTGGAGGAGGGGCGTGTCCGTATCCGAGCGCTCGGGGAACGGCTCTCTGGTTGGCATGGCGCCAGGGCCCGGGGTCGTTACGGTGGCCCCTGGGGGTCACAACGGGTCGTGGGAGACGCCGGCGGTGGCCCCCGAGACGCCCATCTTCCTCATGACCCCCGCCGCTCAAACCATCTCCGGGATCTTCACCTGGACGGCTCTGCTGCTCACCTGCCAACAGATCTACATGCACTTGCGCTACTACAACACTCCCAACGAGCAGCGGCACATCGTGCGCATCCTCTTCATCGTCCCCATCTACGCCTTCGACTCGTGGCTCAGCCTGCTGTTCTTCACTAACGAGGAGTACTACGTTTACTTCGACACCGTCCGCGACTGCTACGAAGCGTTCGTCATCTATAACTTCTTGAGCTTGTGTTACGAGTATCTGGGAGGAGAGAGCGCCATCATGGCCGAGATCAGAGGAAAACCCATCCAgtCCAGTTGTGTTTACGGCACTTGTTGTCTGTGGGGCAGAACGTACTCCATTGGCTTTCTGCGCTTCTGCAAACAGGCGACGCTGCAGTTCTGTGTGGTGAAACCTCTGATGGCCGTGATCACCGTCATCCTACAGGCCTTCGGGAAATACAGAGACGGAGACTTCAATGCGGCCAGTGGTTATTTATACGTGACCATCATCTATAACGTCTCggtcagtctctctctctacgctctcttcctcttctaCTTCGCCACCCGGGATCTTCTGGAGCCGTACGGCCCCATGCTGAAGTTCCTCATGGTCAAATCCGTCATCTTCCTCTCCTTCTGGCAGGGGATGCTGCTGGCGATCCTGGAGAAATGCGGCGCGTTCGCCCGAGTCAGCTCTCCTGACGTCAGCGTGGGGGAGGGGACTGTTGCCGCCGGTTACCAGAACTTCATCATCTGCATCGAGATGTTCTTCGCCGCTCTGGCGCTCAGACACGCGTTCACCTACAAGGTCTACATGGACAAGAGACTGGACGTTCAGGgttGTGTTCCCATCTATGGCCAGTACGGTCGCTGTGCTCCCATGAGCATCTCCAGCAGTCTGAAGGAGACGATGAATCCGGGCGACATGCTGCAGGACGCCATCCATAACTTCTCTCCGGCGTACCAGCAGTACACCCAGCAGAGCCGCTCGGAGCCGCTGAGCCGCTCCAACAGCTGCAGCAACGAGAAAACCCTGCTGCTCAGCTCCGACGACGAGTTCTGACGCCCGCTCGCTCACAAGCGCCGCGAGCCCTACATAGACAGCACGTTTAGGCAGCATGGGCGCTTCCAGGCAGAGTGCGGTTTATCCAGCGCTTCtcaaaccttttaaataaagccaccacaaatcaa

Function

symbol description
tmem184bb Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM184B (transmembrane protein 184B).
si:dkey-217f16.5 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM184B (transmembrane protein 184B).

NR:

description
PREDICTED: transmembrane protein 184B-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043227830.1 True 1518 mRNA 0.59 10 1483985 1491750

Neighbor

gene id symbol gene type direction distance location
LOC122330283 NA coding downstream 100844 1380918 ~ 1383141 (-)
LOC122329932 NA coding downstream 123221 1353090 ~ 1360764 (-)
LOC122332690 LOC107705851 coding downstream 210738 1270753 ~ 1273247 (-)
LOC122330270 NA coding downstream 215724 1263688 ~ 1268261 (-)
LOC122332678 NA coding downstream 220559 1262114 ~ 1263426 (-)
tnrc6bb.1 LOC107745528,LOC107672922,LOC107722687 coding upstream 793 1492543 ~ 1507468 (-)
LOC122329710 LOC107564877 coding upstream 38662 1530412 ~ 1538308 (-)
zmp:0000000896 zmp:0000000896,LOC107745527,LOC107672931,LOC107563726,LOC107564880,LOC107711547,LOC107691081 coding upstream 46941 1538691 ~ 1550787 (-)
LOC122329992 NA coding upstream 90338 1582088 ~ 1585707 (-)
LOC122332889 LOC107575231,LOC107572359,LOC107722878,LOC107709162 coding upstream 93961 1585711 ~ 1586511 (-)
G16124 NA non-coding downstream 3303 1417894 ~ 1480682 (-)
LOC122330746 NA non-coding downstream 28925 1453240 ~ 1455060 (-)
G16125 NA non-coding downstream 50174 1430753 ~ 1433811 (-)
G16084 NA non-coding downstream 152803 1255055 ~ 1331182 (-)
G16100 NA non-coding downstream 155994 1326319 ~ 1327991 (-)
G16159 NA non-coding upstream 65652 1557402 ~ 1557841 (-)
G16161 NA non-coding upstream 73443 1565193 ~ 1578960 (-)
LOC122330691 NA non-coding upstream 95091 1586841 ~ 1588429 (-)
G16170 NA non-coding upstream 125498 1617248 ~ 1647616 (-)
G16171 NA non-coding upstream 128157 1619907 ~ 1865318 (-)
LOC122330455 kdelr3,LOC107731665,LOC107563718,LOC107679478,LOC107674488 other downstream 300397 1164316 ~ 1183588 (-)
G16054 mei1,LOC107674470,LOC107731661 other downstream 331225 1147589 ~ 1152760 (-)
LOC122329780 mei1,LOC107674482,LOC107561079,LOC107674470 other downstream 334092 1134810 ~ 1149893 (-)
G16048 NA other downstream 369283 1109491 ~ 1114702 (-)
LOC122332622 LOC107701866 other downstream 408658 1065482 ~ 1075327 (-)
G16172 NA other upstream 129214 1620964 ~ 1652366 (-)
zc3h7ba LOC107563727,LOC107672930,LOC107722838,LOC107572808 other upstream 296495 1788245 ~ 2000474 (-)
LOC122333107 NA other upstream 354942 1846692 ~ 1850280 (-)
pkn1b LOC107672927,LOC107755614,LOC107742419 other upstream 690776 2182526 ~ 2210233 (-)
G16402 ubn2b,LOC107567211,LOC107677340,LOC107741349,LOC107696333 other upstream 811577 2303327 ~ 2362399 (-)

Expression


Co-expression Network