LOC122333516 (LOC107695639,LOC107696327,LOC107718940,LOC107571536)


Basic Information

Item Value
gene id LOC122333516
gene name LOC107695639,LOC107696327,LOC107718940,LOC107571536
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 3613952 ~ 3616491 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043231175.1
GTCATGAGGGCGTTCCCCCAGTGCGTCAGGTGTGTCTCACCTGAGCTCGGCAGTTCTTCCGCTAGCGACGGGAGCCGCAGcatcctcgtcctcctcctGAAGATGACGGCGCGGAGATGCATCGGCAGCTGCCTGCCGTTGTTCGTCATGGCGGTCGTCTTCGACGTCCTCGGCGTGGTCCTGCTGTTCGTCGGGATATTCGGCAACGTGCAGATGCACGGCGTGTTTTACGGGGATTTCCTCATCCACACCGGCGCCCTGGTCTTGTTCGCCAGCCTGGCCCTTTGGCTCATGTGGTACGTGGGGAACATCAGGGTGAAGGATGAGGATTTGGCGCGCAGATCGAGCGCCGCGCGCAGCGTCAAAGAGCTCGCGAGGAAGCTCACGGAGAGGCTGTCCAAAACACACCTGAAGGACAACACGGGTGAGAAATCGGGAAGCAAAGCTTCCACCATTCGAAACGTAACGTGGGGGAAATCCACCTATTTCCCAGGACACAAGGATTCAGAATCGGACATGATCAAATGTGACGAACTATCCAAAGAGAAGCCGGACGACGGTCAGTTCATGTGCTTCCAGAATCAAGGGTACGAGGACGAGGAGCCACGCAAACCAACTCAAGAAGAGCCAGGCGACCAGACCCGCTCTGAAGACGGTTCAGAGTCGGTCGAGGGCAAACGCAATGAAGGGTCCGACGGGAAGAAGCCGGGAAACGATCAGTTCACTTGTTACCAGAACGAAGGCTACGACGAATCAGAACCAGACGTGGCCAAAGGCGGCGAGAAGCCCTCAGATGATCAGCCAGAGAGCATTGACGTTCTGCTGTGAGAAGGGgtGCTAAAACAATGAACGAATAGCCAAGGACCTCCAATAGTCTTCAATCATTTGCCATTACCATCGTTTCAGATGGTAGTGTAGTAAAACCGCTTGAACGTAGTAAAACACAACCGTCTGTCGTTTATACGGGGGAGTTTCTCAACGGCCTGATATAATGCTGCGATACGTTTAATGCGCACCAAATTGGTGACGTGAACTCCTACTTTGCACAAAATTTAACCTCAAAACGGCCAAAAGTCGCGAAGTGCGACTCGGTTACGGcctttgttttttcttgcaCATGCTCATTTGTAAATTCATGCAGCACCTCATGCGTTGTAGGACTCCATTTCCCTTTCAAAGCGGCAGCTGGGCGCTCATGCAAACTCCTCCAGAGTTGAGCCGTTTCGTTTGTTAGCCACAGCAGCGGCCAAACCAGTCCGACGGCAAATAAAGCGGACGGAGTTTATTCACGGGACCTGCCGCTTTATGTAGGTACGCAAGTGAACGTTAAAACCGTAtgtatatgtgaccctggaacatAAAACCAGACATAAGTTAGATGTTTGTAGCAAtggtcaaaaatacattgtatgggtcaaaatgatcggAACCCAAAATcgttaggatattaagtaaagatcctacttcatgaaaatattttctactataatttttgattagtaatatgcattgctaagaactttatttggacaactttgaaGGTCATTTTCTCAAAATTACAAGATTTCTAAATAGTtctatctcagccaaatattgtccataCAGTGGAAAATCAATGGAAATCGTATAATTCAGCTTTAAGGAAACacttgtgactggttttgtggtccagggtgtatatatagatatcaaaatatgcaaaaataggCTTACATATTTTCTAAGAcgtttgaaaagcatttttaatgtaaaaaaaggcatttcctagcctttttaaatgttatgttttttatttttttgcctttaattttccctttcaaatatttcaatacgAGACT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107695639

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043231175.1 True 1838 mRNA 0.47 3 3613952 3616491

Neighbor

gene id symbol gene type direction distance location
foxk2b LOC107695695,LOC107710983,LOC107718935,LOC107696365 coding downstream 6824 3586641 ~ 3607128 (-)
hlfa hlf,LOC107710981,LOC107718936 coding downstream 70540 3527737 ~ 3543412 (-)
nog1 nog1,LOC107710974,LOC107695666,LOC107718944,LOC107567560,LOC107601571,LOC107696324 coding downstream 162859 3436686 ~ 3451093 (-)
rbfox3b LOC107719784,LOC107695689,LOC107751640,LOC107696360,LOC107601602 coding downstream 235938 2712958 ~ 3378014 (-)
LOC122341579 NA coding downstream 904448 2705757 ~ 2709504 (-)
LOC122341986 pirt coding upstream 1852 3618343 ~ 3620127 (-)
LOC122342169 LOC107695697,LOC107696366 coding upstream 19456 3635947 ~ 3711514 (-)
elac2 elac2,LOC107750164,LOC107695696,LOC107575629 coding upstream 172577 3789068 ~ 3808384 (-)
map2k4a LOC107695698,LOC107756562,LOC107570719,LOC108433489 coding upstream 198390 3814881 ~ 3828692 (-)
LOC122341930 LOC107750166,LOC107663479,LOC107655787,LOC107716258,LOC107721796,LOC107720837,LOC107721799,LOC107575760 coding upstream 215479 3831970 ~ 3846985 (-)
G16779 NA non-coding downstream 87104 3503008 ~ 3526848 (-)
G16780 NA non-coding downstream 88714 3475325 ~ 3525238 (-)
G16781 NA non-coding downstream 90704 3517813 ~ 3523248 (-)
G16753 NA non-coding downstream 342643 3270076 ~ 3271309 (-)
G16475 NA non-coding downstream 967202 2645891 ~ 2646750 (-)
G16815 NA non-coding upstream 4998 3621489 ~ 3621869 (-)
LOC122342142 NA non-coding upstream 167246 3783737 ~ 3786865 (-)
G16901 NA non-coding upstream 520627 4137118 ~ 4138203 (-)
G16926 NA non-coding upstream 617884 4234375 ~ 4277855 (-)
G16930 NA non-coding upstream 648720 4265211 ~ 4267492 (-)
LOC122341810 pctp,LOC107710979,LOC107695691,LOC107718942,LOC107567557,LOC107579518 other downstream 130503 3473444 ~ 3483449 (-)
LOC122333478 LOC107695702,LOC107724673,LOC107601588,LOC107553654,LOC107716264,LOC107673211 other downstream 294766 3314752 ~ 3319186 (-)
G16478 NA other downstream 959922 2649842 ~ 2654030 (-)
nup85 nup85,LOC107677339,LOC107569694,LOC107696313,LOC106601803 other downstream 973861 2631782 ~ 2640091 (-)
LOC122341591 NA other downstream 1129722 2479128 ~ 2484230 (-)
LOC122341931 LOC107673185,LOC107720837,LOC107573119 other upstream 231489 3847980 ~ 3863851 (-)
LOC122340684 cyp2k6,LOC107678271,LOC107553656,LOC107678272 other upstream 368165 3984656 ~ 3987431 (-)
G16953 adcy9,LOC107695715,LOC107718568,LOC107715643,LOC107553626,LOC107661757,LOC101884360 other upstream 786606 4403097 ~ 4407697 (-)
G17131 trap1 other upstream 830889 4447380 ~ 4448881 (-)
G17133 trap1,LOC107573746 other upstream 833824 4450315 ~ 4453135 (-)

Expression


Co-expression Network