LOC122341020 (LOC107601567)


Basic Information

Item Value
gene id LOC122341020
gene name LOC107601567
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 3962269 ~ 3964517 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234315.1
tctggttgtttttcaggatttgAGCTTCACTAGATCTATCTAGTGAATAGACATGCTATGACATGTTCATGTAACAGGTGATcttataataaacacaatatatGCTAAAACATGCTGTCAAAGGTCACTTTAGTAgtaagaaagaaatgcattttgcacATGAACAAACTTGAATGAGAAAACAATCAATACAGATAAATGCATGAAGACACCTTTCTACCCACCTAGTTGTCTATCTCAGAAGACAACTAGGCATACaggtgcaaaataaatgtaaactacaTGTGATTGTAAACACGTCCTGATTTTTCTGAGCTGACATGTTCGTAGGTcagcatattttgttgaccataaaaacaacattttaatccaaaaatgtagtcCTGACCATATTTCTACAGATAAATATAACCTTACTCATGAATAAtccttaaaatgtaatgtaatgatagatgaatgataATGATGTACatgcaccaaacactgattgtaggcttaaacatcataaaaaaactataaattggTTATTCACAATGTCGTTCCAGCATCAACAAAGATGTTAATCACACTCATCAAAAACAGGTTCTACATATAGGctacattcatataaaaatgtttttcactatTACTTTGAAGACTAGACAAAGTATTtaagttatttcaaataattattcagtGCACTTTCTTCAAAGTGTTCATACAAGTTATATGGAGTAAAAGACGCAAAAAAGTTGAAGccttattatttttagcataattCAGTTTGTCCTGTGTGAAACCACAGAGAGACCAtcacatgcgcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacattaggtaTATAAAAAGCAACCTTCTCATCTCTGAAATGTCAATGTTGCCTGGCTGTGAACACCTGGCTTCCAATCTTCTCTCGGTATTGctccaaataaaacaacacagagtttgctaaaaaaaaactacattctCAGCATCTACACTTCACTAGATCTACTAGATCATCTGAGGGATCTGACTGAATCAAGATGCTGCTGGTCATTCAAGCTCTTCTTATTTTTGCTTCTCTAGGACAGGACCacagagctgctgctgctgttaaGGAACAAATATATCCACTGGATATGGCACTGAATTCAGTTGATGATCAGTATCATGGCTGCACCAGGGAAATGGCACAACAGGTGGAAACAAGATATTTTAATAGGGAACTCAATAACCGTagaactaattttaaaatagcttgggaagagggtgaaaaaaacattaaaaatccaGAAAATAACTTGACGAGGAATCATTCAATTGCCATTTATATGTATACTGGTGATAAAGTATTTCGTCTCTTCAACAACGCAACTCGTTACAGTAAACAAAACTACACAGCCGAGACATACGAATGGTATTCACTTCACTTTCTGTTAACGGAAGCCATACAGATTCTGAAGGCAACGCAAAATGCATGCTATGATACCTATCGTGgtacaaattttaaatacaactttCTCAACACAACCGTTCGTTTTGGCTCGTTCGCGTCTTCCACTTTTGTTCGTaacaaaacacgtttttttggaaatgcatcTTGCTTTGAAATCAAGACGTGCCATGGTGCCGAGGTAACAAACTATTCAAAGCTTTCTCGTGAGAGAGAGGTGCTGATTCCTCCATATGAGATGTTCAAAGTCACTGCCGTTAGAAACAGGATGGATCAGCCCGATCTCTGGTGTGAGACTGTGTATGTGTTGAACAGCAATGGAACAAGAAGTGACCTGAACTGTGCATTGATTAACAGTGTTTCtttgtcataaaatataatgaaatacagttattttaaatgatttaagagtggttttatttcttcatttacgTCTTTGTGCATCTCAAAAATGCCCAAAAATACAACTTAATACTATCATAACATGCAAAACATTTCCTGGTCTAGTTTAGccttgttttcttgtgttttgttcACTTGTTTAATGACTTTTGCTTGCCTCTGTTCTCTTtgctgcctgttttgaccatgtctAAGAATAAAGTCTAGCGAATGGA

Function

NR:

description
PREDICTED: T-cell ecto-ADP-ribosyltransferase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234315.1 True 2082 mRNA 0.36 3 3962269 3964517

Neighbor

gene id symbol gene type direction distance location
LOC122341029 NA coding downstream 8230 3952819 ~ 3954039 (-)
LOC122340995 rnps1,LOC107553655,LOC107673212,LOC107601591,LOC107716265 coding downstream 15804 3941940 ~ 3946465 (-)
LOC122340901 LOC107695670 coding downstream 53290 3902160 ~ 3908979 (-)
LOC122333498 NA coding downstream 73791 3881900 ~ 3888478 (-)
mif4gdb mif4gdb,mif4gd,LOC107724678,LOC107553652,LOC107570710 coding downstream 80707 3877647 ~ 3881562 (-)
LOC122341012 LOC107576979,LOC107716248,LOC107673194 coding upstream 11817 3976334 ~ 3977339 (-)
LOC122340986 NA coding upstream 15630 3980147 ~ 3981915 (-)
LOC122340658 cyp2k8,LOC107718556,LOC107553661,LOC107678270 coding upstream 27168 3991685 ~ 4001580 (-)
LOC122340758 cyp2k16,LOC107678266,LOC107718555 coding upstream 38217 4002734 ~ 4006487 (-)
LOC122340716 cyp2k21,LOC107553659,LOC107678268,LOC107742084,LOC107553662,LOC107718554,LOC107742071,LOC107678269,LOC107601586,LOC107695651 coding upstream 46547 4011064 ~ 4019711 (-)
LOC122342142 NA non-coding downstream 175404 3783737 ~ 3786865 (-)
G16815 NA non-coding downstream 340400 3621489 ~ 3621869 (-)
G16779 NA non-coding downstream 435421 3503008 ~ 3526848 (-)
G16780 NA non-coding downstream 437031 3475325 ~ 3525238 (-)
G16901 NA non-coding upstream 172601 4137118 ~ 4138203 (-)
G16926 NA non-coding upstream 269858 4234375 ~ 4277855 (-)
G16930 NA non-coding upstream 300694 4265211 ~ 4267492 (-)
G16933 NA non-coding upstream 350664 4315181 ~ 4315571 (-)
G16949 NA non-coding upstream 405208 4369725 ~ 4371084 (-)
LOC122341931 LOC107673185,LOC107720837,LOC107573119 other downstream 98418 3847980 ~ 3863851 (-)
LOC122341810 pctp,LOC107710979,LOC107695691,LOC107718942,LOC107567557,LOC107579518 other downstream 478820 3473444 ~ 3483449 (-)
LOC122333478 LOC107695702,LOC107724673,LOC107601588,LOC107553654,LOC107716264,LOC107673211 other downstream 643083 3314752 ~ 3319186 (-)
G16478 NA other downstream 1308239 2649842 ~ 2654030 (-)
nup85 nup85,LOC107677339,LOC107569694,LOC107696313,LOC106601803 other downstream 1322178 2631782 ~ 2640091 (-)
LOC122340684 cyp2k6,LOC107678271,LOC107553656,LOC107678272 other upstream 20139 3984656 ~ 3987431 (-)
G16953 adcy9,LOC107695715,LOC107718568,LOC107715643,LOC107553626,LOC107661757,LOC101884360 other upstream 438580 4403097 ~ 4407697 (-)
G17131 trap1 other upstream 482863 4447380 ~ 4448881 (-)
G17133 trap1,LOC107573746 other upstream 485798 4450315 ~ 4453135 (-)
LOC122341034 NA other upstream 638034 4602551 ~ 4650642 (-)

Expression


Co-expression Network