XLOC_006872 (nanp)


Basic Information

Item Value
gene id XLOC_006872
gene name nanp
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 41944138 ~ 41947996 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013205
GATGCAATGCGATCGTGACGACTTCACCTGTCTGACGTCAGCTGCCGGAGTTCCGCGTGTTCGGAACTGCTGTGCATATCGGCTGCATATGTGGAATATATGATGGGAAGTCGCGGGGTTTTGTCGATTATCTTTGATTTGGATAACACGCTGATCGACACAGCCGGAGCAGGACGAACTGCCATTCAGAAGGTGTGCGAGCTGCTCAAGTCGACACACGTGCAGGAAAGCCACATCAGAGACATCTGTGAGCGCTTCTTACGAAAGCTTCTCCAAGAGTCCTTTGACCCATCAGAAGGAAAAACGATAGATGACGTGAGGATCCAGCACTGGTGTGAAGCCCTACAGGAGACACCGGGCACAGATCCTGATCCGGCTCTAGCCTCCAGATGCTACTACACATGGAAAAACACACGCTTACAGGCTTTGAGTTTGTCTTCAGAGGTTCGAGCACTGCTGGAGGAACTGCAGAAGAATTACAAACTGCTTCTGCTCACCAATGGTGACACTCAGACGCAGCGGGAGAAGATCGAAGCAGTGAGATGTGAGGGTCTCTTTAGTTTGGTGGTAGTCGGAGGAGATCATCCGGAGCAGAAGCCGGCGCGCTCCATCTTCACTCACTGCTTCGAGTCTGCAGGAGTTCGGCCGCAGGACTGCATCATGGTGGGAGATTCTCTTACCACAGACATCCAGGGAGGCGTTAATGCTGGAGTGCGGGCAACTGTGTGGATAAATGCTGGCAGTAAATCTCTCCCGCAGGACTCCGTAACTCCAGACTACACTCTACCTACTGTACTGCATCTGAAGGAAGTTCTAGCTCAGCTGGCAtgatgcacttttttatttttattttaaaggtgctatagaatgaaatttgttatttacttgggcatagctgaataataagagcTCAATATTGACATACCGTGAGCCTCAAACACCACTGTttccttgttctcatgtaaatcgaGTGAATGTAAAAGACAGGACAATCCAAACAAAACATTGACTGTCATGTTCCACAATGGATCATTAACATGCATGCTCCAGGAGGCGTTTGATTGGCCTCaatgtttcctagtgagattacaacagtgataattttcctattttaaatTCATCCAagcttcattcattaattttccttcagcttagtccctttattcatcagtggtcgccacagcggaatgaactgccaacttatccagcatatgttttacacagcggatgcccttccagctgcaaccccatactgggaaacacccatatacactcattaaacaatttagtttattcaattcacctatacctcatgcctttggactgtgtgggaaactcgatcaaacacggggagaacatgtaaactccacacagaaatgccctctgggccagctgggactcaaaccagcgactttcttgctgtgaggcaacagtgctaaccactgagccaccatgtcacccctaaACTagtataatcattcattttcttttccgcttagtccctttattaatctagggtcaccacagctgcccttccagctgcaacccatcactgggaaacccatacacagtcattcgcacacatacatacactatggacaatttagcctacccaattcacctgtaccacatgtcttcggactgtgggggaaaccggagcacccggaggaaacccacgcaaacgcagggagaacatgcaaactccacacagaaacgcaaactgacccagccgaggttcaaataagcgaccttcttgctgtgaggcgacagcactacctactgcgtcgccagCTTGTATTATACCTACTAAGctggactcttattttgaaagaGTAAAGGATCAGTTTTGTAAACCAGGCAAAGTGCAGATGTGGGATATGCAGATTATAAATTTATGCAGTGCCATCCCTAGAAGGGGTAACGcctatttaaatatgtcttttcGCAGTTCAACTTTGTATATTGTGAAGTTTGCAgagtatgtttgtaatgaggcaacaaataaatgtaaactgcaGAGTATAAA

Function

symbol description
nanp Predicted to enable hydrolase activity. Orthologous to human NANP (N-acetylneuraminic acid phosphatase).

GO:

id name namespace
GO:0005575 cellular_component cellular_component
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
ko00520 Amino sugar and nucleotide sugar metabolism
ko01009 Protein phosphatases and associated proteins

ZFIN:

id description
ZDB-GENE-050522-94 Predicted to enable hydrolase activity. Orthologous to human NANP (N-acetylneuraminic acid phosphatase).

Ensembl:

ensembl_id ENSDARG00000075143

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013205 True 2026 mRNA 0.46 2 41944138 41947996

Neighbor

gene id symbol gene type direction distance location
XLOC_006871 cisd1 coding downstream 27088 41910342 ~ 41917050 (-)
XLOC_006870 ipmka coding downstream 35555 41887575 ~ 41908583 (-)
XLOC_006869 NA coding downstream 74746 41866169 ~ 41869392 (-)
XLOC_006868 CT583720.1 coding downstream 99071 41844953 ~ 41845067 (-)
XLOC_006867 CABZ01117863.1 coding downstream 281050 41662972 ~ 41663088 (-)
XLOC_006873 NA coding upstream 40908 41988904 ~ 41992203 (-)
XLOC_006874 NA coding upstream 74797 42022793 ~ 42026479 (-)
XLOC_006875 NA coding upstream 83311 42031307 ~ 42045075 (-)
XLOC_006876 rmdn2 coding upstream 98774 42046770 ~ 42066299 (-)
XLOC_006877 NA coding upstream 175866 42123862 ~ 42186670 (-)
XLOC_006471 BX537274.2 misc downstream 31679233 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 41117913 825904 ~ 826225 (-)
XLOC_006866 BX548002.1 non-coding downstream 713729 41230293 ~ 41230409 (-)
XLOC_006864 NA non-coding downstream 830076 41011832 ~ 41114062 (-)
XLOC_006883 BX936318.1 non-coding upstream 649764 42597760 ~ 42602408 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000012_01671522_01672166 NANP coding CI01000012 null 1671522 ~ 1672585 (+)