CI01000003_00228735_00265553 (MB21D2)


Basic Information

Item Value
gene id CI01000003_00228735_00265553
gene name MB21D2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 228668 ~ 265553 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_00228735_00265553.mRNA
ATGTCGGATCCGTGGACGTGCACGCGCCTTTTCTGTAACGGTTGTATCAATTTGCGGACCCGCCGCGGAGGTAAGGTTTTAATCGCGGATGCGGAGTGGCTGCAGCGCGGAGCCACGGCGGGTCCGCGATCCGCCTTCGTTGCAGATCCGTCACTGCGCGCAAGTGGACGCCGATACGGGTCCGTTCGCGGATACGTTCCGGAAGCCGCGATACCTCCGCAGCCGATCCGCCTATTAAAAGATCAAATTCTGCACGAACAAATTTTTCTGTGTATATGCTTTATTGGAGGGGAAACCACGAGAAACGTCGCATCCTCGAAGGCTCCTCTTGGTGTGAAGATGGCGGTCCCAGCTCCGAGCAGCCGGACAGGATCCGTTAGCAGTCTGGGAAACAGTCCAACCGCAGCACCGGGAGGCTTAAACAACAACAACACCAAGCTGTGGTGCTGCCATGAGCTTGATTTCAGGTCTGCAGTGAAGATCGAGGAGCTCAACCGACTCATCCATGAATTCAGTAAACAAGACCAACGAGAGTATGATGACCAGAGGGCACTGGAAATACACACCGCCAAGGATTTCATCTTCTCTATGCTCGGCATGGTGCAAAAGCTGGACCAAAAGTTGCCTGTCGCAAATGAGTACCTACTGTTGTCCGGTGGTGTGCGAGAAGGTGTGGTGGACATGGATCTTGATGAGCTTGGTATCTATAACCGTGGCTCTGACTATGACATGGCCTTTACCCTGTTGGTTCCTGCACTAAAGCTGCACGACCGGAACCAGCCTGTCACACTGGACATGCGCCACTCAGCACTGGGTCATTCTTGGCTCAGCTTGCGACTTTTTGACGAGGGTACCATTAACCGTTGGCGGGACTGCTGTACGCTGACTGACCATCTAAACGGCACCACCAACTACTTCTTCTCACCCACACTGGTAGCTGACTGGTTCCATGAAACTGTTGGACTGGTGCTGGCAGAGTTACAGCGCAAGCCACAAAGGGGCACCCCAAGGGTGGAGCGGGTTGAGCGTCACAGCACGATGCTGTCTATGATTTTAGGTGTGGGCAGCAGCCGCATGCTTTATGACATTGTTCCTGTGGTGTCTTTTAAAGGCTGGCCAGCGGTTGCTCAGAGCTGGTTGATGGAGAACCACTTCTGGGATGGCAAAATCACAGAGGAGGAGGTTATCAGCGGCTTTTATCTGCTGCCTGCCTGCTCAGCCTCTGGTTGCCAGGAAAATGAGTGGCGTCTTTCTTTCGCCCGCAGCGAGGTGCAGTTGAAAAAGTGCATTTCACCAGGCCTCATGCAAGCTTACCAGGCATGCAAGGCGATTGTTGTCAAGCTTCTAGCCCAACCCACAGCTATCAGTCCTTACTACTTACGCAGCATCATGTTGTGGGCCTGTGACCGACTACCTGCAAGCTATTTGTCACAGGAAGACTATGCTGCACACTTCCTGCTAGGTCTCATTGATGACCTGCAGCACTGCCTTGTCAACAAAACCTGCCCTAACTATTTCATCCCGCAGTGTAACATGTTGGACCACTTGTGTGACGAAACCACCATATTTCATGCTCGTAAGCTAGCACTGGTACGCTCGGATCCGGCTGAACACCTGCGCTCCATCATCGAACAAGCCAAGGCGGCCAACAGACTAACGCAGGAGATGCAGCGTCGCGGGAGTTCCTCAGGACTGCCCTCTCCACTGGCGGATCCTTCCTCAGCAGATCACCAGCAGCCAGATGACCGCTTGGCCAAGAAGCTACAGCAGTTGGTAACCGAGAATCCAGGCAAGTCCATCTCTGTGTTCATCAACCCTGACGATGTCACACGACCTCACTTCCGTATTGATGACAAGTTCTTCTGAAAATGAAGGTCTATTTTCACTGCTCTGATGGCTGAACCAATGGGATGTGTATGACATCGTCAATAAA

Function

symbol description
mb21d2 Orthologous to human MB21D2 (Mab-21 domain containing 2).

GO:      GO:0032403, GO:0098609, GO:0005913, GO:0098641

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_00228735_00265553.mRNA True 1933 mRNA 0.53 3 228668 265553

Neighbor

gene id symbol gene type direction distance location
CI01000003_00196906_00197323 NA coding downstream 31345 196745 ~ 197323 (-)
CI01000003_00076297_00077678 NA coding downstream 150868 76270 ~ 77800 (-)
CI01000003_00074301_00075497 NA coding downstream 153171 74301 ~ 75497 (-)
CI01000003_00301515_00302754 NA coding upstream 35962 301515 ~ 302902 (-)
CI01000003_00364162_00366637 NA coding upstream 98528 364081 ~ 366637 (-)
CI01000003_00388122_00389931 DUSP28 coding upstream 122569 388122 ~ 390027 (-)
CI01000003_00410927_00411601 SFT2D3 coding upstream 145016 410569 ~ 412508 (-)
CI01000003_00418856_00424844 NA coding upstream 152924 418477 ~ 425969 (-)
G22713 NA non-coding downstream 40289 153642 ~ 188379 (-)
G22728 NA non-coding downstream 100408 121680 ~ 128260 (-)
G22731 NA non-coding upstream 801 266354 ~ 266732 (-)
G22733 NA non-coding upstream 1637 267190 ~ 267442 (-)
G22734 NA non-coding upstream 27451 293004 ~ 293209 (-)
G22737 NA non-coding upstream 30402 295955 ~ 296164 (-)
G22743 NA non-coding upstream 46944 312497 ~ 312705 (-)
G22716 NA other downstream 158924 50512 ~ 69744 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015173 mb21d2 coding NC_007113.7 CM002886.2 5563077 ~ 5581772 (+)