CI01000003_00388122_00389931 (DUSP28)


Basic Information

Item Value
gene id CI01000003_00388122_00389931
gene name DUSP28
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 388122 ~ 390027 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_00388122_00389931.mRNA
AGTGGATCTGTGATTATGATGGTAGTTCATAACTTATGTTTCTTCAAGATACATACACAAATATATAGTCACATATATGCTGGCATATAGTGAGAAATGCTGCAGTTGAGCACAGTTACAGACTGTCTGCTAATCAGTAATGCCCGGTCAGCCTGTAACAATGATCTCCTCCAGAAGGAGGCGGTCACTTTCTGTATCAATGTGTCAAAGCAGCAACCCTTTCCCTCAATGCGGGTCAGCACATTGCGTGTACCTGTTTATGATGACCCTAATGAAGACCTGTACAAGCATTTTGATCGCTGTGCTGATGCCATAGCAAGCGAGGCAGCAAGGGGAGGCCGCACCATTGTGTACTGTAAGAATGGACGCAGTCGTTCAGCTACTGTCTGTGTGGCTTATTTAATGAAGCACCAGGGTCTCACCCTAACAGACGCCTTTCAGGTAGTAAAACGAGCCCGATCAGTTGTTGAGCCCAACCCAGGATTTTGGACTCAGCTGGAGCGGTATGAACAAGAGCTGAAGATCAGGAGACCAACACAACCAAAAAACGAAAGTAGTTCTTTCACCTCACCCCTCAGAGACAAGTACTTAGAG

Function

symbol description
dusp28 Predicted to enable MAP kinase tyrosine/serine/threonine phosphatase activity. Predicted to act upstream of or within protein dephosphorylation. Predicted to be located in cytoplasm. Orthologous to human DUSP28 (dual specificity phosphatase 28).

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0016791 phosphatase activity molecular_function

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_00388122_00389931.mRNA True 594 mRNA 0.46 3 388122 390027

Neighbor

gene id symbol gene type direction distance location
CI01000003_00364162_00366637 NA coding downstream 21485 364081 ~ 366637 (-)
CI01000003_00301515_00302754 NA coding downstream 85220 301515 ~ 302902 (-)
CI01000003_00228735_00265553 MB21D2 coding downstream 122569 228668 ~ 265553 (-)
CI01000003_00196906_00197323 NA coding downstream 190799 196745 ~ 197323 (-)
CI01000003_00076297_00077678 NA coding downstream 310322 76270 ~ 77800 (-)
CI01000003_00410927_00411601 SFT2D3 coding upstream 20542 410569 ~ 412508 (-)
CI01000003_00418856_00424844 NA coding upstream 28450 418477 ~ 425969 (-)
CI01000003_00458786_00461307 NA coding upstream 68441 458468 ~ 461307 (-)
CI01000003_00473640_00508021 PEX5LB coding upstream 83549 473576 ~ 508021 (-)
CI01000003_00640353_00641395 NA coding upstream 249915 639942 ~ 644060 (-)
G22767 NA non-coding downstream 10230 377605 ~ 377892 (-)
G22756 NA non-coding downstream 49860 338052 ~ 338262 (-)
G22745 NA non-coding downstream 70805 317115 ~ 317317 (-)
G22743 NA non-coding downstream 75417 312497 ~ 312705 (-)
G22737 NA non-coding downstream 91958 295955 ~ 296164 (-)
G22704 NA non-coding upstream 16393 406420 ~ 408311 (-)
G22781 NA non-coding upstream 49095 439122 ~ 440180 (-)
G22709 NA non-coding upstream 60496 450523 ~ 451116 (-)
G22798 NA non-coding upstream 140779 530806 ~ 531021 (-)
G22807 NA non-coding upstream 173181 563208 ~ 563430 (-)
G22716 NA other downstream 318378 50512 ~ 69744 (-)

Expression


Co-expression Network