CI01000003_00473640_00508021 (PEX5LB)


Basic Information

Item Value
gene id CI01000003_00473640_00508021
gene name PEX5LB
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 473576 ~ 508021 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_00473640_00508021.mRNA
ATGGGTTTGGTTCTTGCAGGATCTCAAGATGGACCTCATATGTTCTTTACACATTACCAAGAGGTCGTTACCAAGACTGATAAATGGATTCACTTGTGTGCCCCCTACATATCGATGTTTTATGACCTCTGTTATGAATTGTGTAGTGAGCAGCAAGAGAGCCGTCCATTACTGAGCCCTTCTATCGATGACTTCCAGAGTGAGAGCAAGAGTGATGTAGCCACACGGCCAGTCACCTCCAACACAGCAGCACTAGACCTGGTGGACTTGAGTGAACCATGTGAGAGAAGGTGGAGCTGGGACAGACGGAGTCCACGTGGGTCTCGTAAGAATGGTTTTTGTAAAAGTAGTCTCCGCAAGAAGAAGACGGAAGAGACGGAGCTGATCCAGGTGGAGACAGAGCCAACATCCCCTAGCCGTTCTAACCCTGAAAGAGCCTCATTAGATTCAGTGAGCAGCTCACCCCTGGAGAAATGGGAGGAGGTAAGCCTTCACCCAGACAGTGCCTTGAATGGAGGGCGGAAGTGGAGATATGAGAGGAAGAGGTGCACATCCAACCATTCATCCTCTGAGCTTTTGTGGTCTGCAGACTTTAAAACAGATTTCTCTAATAGGCATAGCGCTCTGGAGCTCAGCATTAGCACGGAGTCAGACCCCGGGCCGGCCCCTCAGCGGCAGAGGCCCCAGCTGGGCGGCACTTTACTGGGGAGACAACACTCATTAGAAGAGGAGTTTGTTCGAGCCAAGGCTGCTGTGGAGTCAGACACTGAGTTCTGGGATAAAATGCAGGCCGAGTGGGAGGAGTTGGCACGGAGGAACTGGTTGGAGGACTCTGACAGTGAAGGCCTGGTTCCACCCAACTTTTCATCCACTGAAAAGGGTTACTACTTCCATGCCAATAACCCTTACAAAGACTGCACCAATGCTTTTGAACAGGGGCTGCAGAAGTGCAGGGACGGGGATCTGAACAGTGCCGTACTACTGCTGGAGGCAGCCATCTTACAAGACCCTCAGGACTCAGAGCTCTGCCCTGGCCTTCCGCTGGGGTTCCCAAGCCTCCAGATCCTCCCTGGCTCTACCCTCCCTTCCCTTCCTGGTCATCCATCTGGGTTCTGGACCATCCAGAGCTTTCCTGGATTGTGCCCCAAACGCCAGCCTGGTTTCCCTACCTCCCTCCACTTCCTGTCTCTGTCTGACCCCAGTCTGTCTTCTGTTGTTGTGTCTGCTTGGCAGGTTTTGGGCACCACACAAGCAGAAAATGAGAATGAGCAGGCAGCCATTGTTTGTCTTCAGAGATGTTTGGAGCTGCACCCAAACAATCTGAAGGCCCTCATGGCTCTGGCGGTGAGCCTGACTAACACAGGGCAGCAGCCGGAGGCATGTGAGGCTCTTCACCGCTGGATCAGATACAACCCCAGATACAGACATCTGCTCCAGAACCGCAGCCCTCTGGATGGCTCCCCACTGCCCAGCCGCAGAGGGTCCTCCATCTCCCCCATCCCCACTCTTGGATGCTCTCAGCTAGTGGAGGTGTTGGAGCTGTATCAGGAAGCAGTGCAGAACACTGAAGGGGTGGACCCTGACCTCCAGACAGGCTTGGGTGTGCTCTTCAACCTCAGTTCAGAGTTTGACAAAGCTGTGGACGCCTTCAACGCCGCACTGTCTGTTCGACCTGAGGACTATCTACTGTGGAATCGGCTCGGGGCCACACTGGCAAATGGCGACCGCAGTGAGGAGGCAGTGGAGGCCTACACCAGAGCTCTGGAGCTCCAGCCAGGCTTCATCCGCTCGAGATACAACCTCGGCATCAGCTGCATCAACCTGGGGGCACATCGAGAGGCAGTGAGCAACTTCCTGACAGCTCTGCACCAGCAGAGGAAGAGCAGGAGTCATCAGGTGATGTCCAGCAACATCTGGGCAGCTCTGCGGATCGCCCTCTCACTCATGGACCAGCCAGAACTTTTCCAGGCAGCAAGCGTGGGAGATCTGGATCTTCTAATGAGGGCCTTCAACATGGACATGTGATCAAACTCGGACCTGTGAAATCTATTATTCACTAACAGTAGGCACAAAGTTAGGCTCGAGTAAA

Function

symbol description
pex5lb Orthologous to human PEX5L (peroxisomal biogenesis factor 5 like).

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_00473640_00508021.mRNA True 2089 mRNA 0.54 14 473576 508021

Neighbor

gene id symbol gene type direction distance location
CI01000003_00458786_00461307 NA coding downstream 12269 458468 ~ 461307 (-)
CI01000003_00418856_00424844 NA coding downstream 47607 418477 ~ 425969 (-)
CI01000003_00410927_00411601 SFT2D3 coding downstream 61068 410569 ~ 412508 (-)
CI01000003_00388122_00389931 DUSP28 coding downstream 83549 388122 ~ 390027 (-)
CI01000003_00364162_00366637 NA coding downstream 106939 364081 ~ 366637 (-)
CI01000003_00640353_00641395 NA coding upstream 131921 639942 ~ 644060 (-)
CI01000003_00719773_00720087 NA coding upstream 211562 719583 ~ 720332 (-)
CI01000003_00806620_00830978 NA coding upstream 298330 806351 ~ 831623 (-)
CI01000003_01194276_01196374 BAMBIB coding upstream 685295 1193316 ~ 1197019 (-)
CI01000003_01200556_01220189 NA coding upstream 692031 1200052 ~ 1220189 (-)
G22709 NA non-coding downstream 22460 450523 ~ 451116 (-)
G22781 NA non-coding downstream 33396 439122 ~ 440180 (-)
G22704 NA non-coding downstream 65265 406420 ~ 408311 (-)
G22767 NA non-coding downstream 95684 377605 ~ 377892 (-)
G22756 NA non-coding downstream 135314 338052 ~ 338262 (-)
G22798 NA non-coding upstream 22785 530806 ~ 531021 (-)
G22807 NA non-coding upstream 55187 563208 ~ 563430 (-)
G22810 NA non-coding upstream 59977 567998 ~ 568221 (-)
G22698 NA non-coding upstream 62433 570454 ~ 573928 (-)
G22716 NA other downstream 403832 50512 ~ 69744 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015167 pex5lb coding NC_007113.7 CM002886.2 5245692 ~ 5280718 (+)