CI01000003_00806620_00830978


Basic Information

Item Value
gene id CI01000003_00806620_00830978
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 806351 ~ 831623 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_00806620_00830978.mRNA
ACATGACTGCTGACAGTGCATACTACATAAATAAAGGGTGGACTGTTAGGACAAGTTATGCAATGTGAAGGTCTGATGTAGGCCTATTGTTGGGGATAAGACTCTGGTATGGTCTGATGATATCCATGCACACAGCTAATCTCTGGCACATGTGTAAAGGCATGGTGTGGTTTCACACCAACACAGATGATGAACCAATACTCATGCATGTGTCAAGTCCTGAGATTCCCAGCTCCATACTCCATACTAAAACCCAGCATGCTCTGCACAAGAGAATAAAATCCAGACTTACTCTGTACACATGGAAATGAGCAAGAAACGGGAATGATTTTTTGAGCTTGTCAAAACGACGCATCTTGAGTTCTATGAGACAATCCACAAAAAGTCAAGCTAAGAATCCGAGACACTTTTGCTGGAGAACAAGGTCCGAGATGAAGAGACCACTCCAAAACGGTGAAGGTCTCCTCAGTTTGAAGGTCTCCTGAAGTTGTACAGCCCACGTACTACATTCCATCGCGGGCAATCCACATTAAGCTCCTTTAACCGAAGATCAGTGCTAGCCTGGAGAACTTGTATGCGGGGGGACCATGTGGGGAAAGGCAAGAAAACACCAGAGAGAGAGGTTTGCCAAAGGGAACTGTTCACATGCCAGCCAAGTTAGAACATCTCAAAACCAAGATCACACTGCAGGCTGTGGAGCGAGTAGAAGTCCTCCTTATTGCAAAAAGATTTTGCAGAATGTACTGGATGCGTGACTGTGTAATTCCTGCAACTCGCAAACAGACGCTGGGGAAGTGCCCCTTCTCTTTCCCTCCCTCTCGCTCTCGCTCTCCTCCCTCCATCAGCCTGTGCCTGGGACAGAGACTCTATGGTATTCGGATGGAGGAGCATTTGATCGTGAGCCAAAAGCCCTGGCTGCTGGTCTCCACTGCTGCAGTGAGTGGTCGCCCCCGACAACAGTGGCTACCTCATCAAGTGCACTCACCAGTGAGCAGAGGGCTTAAGGCTCTCATCCAATCAGAACGCACACAGGCACTGCTTGATGAAGAGGCTTTAATCCGGCAGGCGAGCTTAATGTGTGGCCAGTCTGCTGTTTTTCAGCCCACCCAACCAGCGGTCTTCGCTCATCTGACCCTCCATCAAGAAGTTTTCATATGTAAATACCTGGATTTTGCCTTCCCCAGGAAAGCTCATTTGAAACCACCCCAACTATCTGTTCAACAATTGGTTTACATGATGCCAATGGCTGAAGCATCAACAGCAATGTTATTAAATCCCACTTCACTCACATACCCTCCTCCCCCACCCACTGTTAGGGGATATTCTCCTGCTGCCGGGCCATAACCGCACATGTCAACGTGACACACAGACCAGCGTTTACCCCTACACTGTCTTCATAGACAAAATCACCACCACACAAGCCCAGTACTATGTTTCACTTTGAATCAACAGGCTGGGTGTAACTTAACTGATTTAGAGTAGGACATGGCCTTATAGAAGAAAGTTTTAATGACATGATCAAAGTCCCAATTATTTAACAAAAAACCACAGCTCTTTGCTCAACACCACATGAACTCCTCACCCAATACCAAGATAGTAGCTGCTGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_00806620_00830978.mRNA True 1613 mRNA 0.47 6 806351 831623

Neighbor

gene id symbol gene type direction distance location
CI01000003_00719773_00720087 NA coding downstream 86019 719583 ~ 720332 (-)
CI01000003_00640353_00641395 NA coding downstream 162875 639942 ~ 644060 (-)
CI01000003_00473640_00508021 PEX5LB coding downstream 298330 473576 ~ 508021 (-)
CI01000003_00458786_00461307 NA coding downstream 345044 458468 ~ 461307 (-)
CI01000003_00418856_00424844 NA coding downstream 380382 418477 ~ 425969 (-)
CI01000003_01194276_01196374 BAMBIB coding upstream 361693 1193316 ~ 1197019 (-)
CI01000003_01200556_01220189 NA coding upstream 368429 1200052 ~ 1220189 (-)
CI01000003_01348419_01352984 RAB18B, RAB18, RAB18A coding upstream 514976 1346599 ~ 1352984 (-)
CI01000003_01368353_01374263 YME1L1B, YME1L1 coding upstream 536730 1368353 ~ 1374263 (-)
CI01000003_01424386_01424816 NA coding upstream 592727 1424350 ~ 1424915 (-)
G22822 NA non-coding downstream 61748 742302 ~ 744603 (-)
G22823 NA non-coding downstream 74094 657436 ~ 732257 (-)
G22821 NA non-coding downstream 88259 716445 ~ 718092 (-)
G22698 NA non-coding downstream 232423 570454 ~ 573928 (-)
G22973 NA non-coding upstream 26804 858427 ~ 860858 (-)
G22983 NA non-coding upstream 51584 883207 ~ 883409 (-)
G22984 NA non-coding upstream 59547 891170 ~ 891619 (-)
G22988 NA non-coding upstream 93186 924809 ~ 925081 (-)
G22996 NA non-coding upstream 113407 945030 ~ 950078 (-)
G22716 NA other downstream 736607 50512 ~ 69744 (-)

Expression


Co-expression Network