CI01000003_00458786_00461307


Basic Information

Item Value
gene id CI01000003_00458786_00461307
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 458468 ~ 461307 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_00458786_00461307.mRNA
GATGCCAGAAAAGCATGCAGCGACTCCAGCCTGTCCCAGATTACAGCTGGTCTGGATTCAGTTGGAAGGATCCAGATGAGAACGAGGCGGACCCTCCGAGGCCATTTGGCCAAAATCTATGCCATGCACTGGGCCACTGATTCCAGGTCATCATGGGTGATGACTTGCGCCTATGCTCCCTCAGGGAATTATGTAGCCTGTGGAGGCCTGGACAACATCTGCTCAATCTACAGCCTTAAAACCCGTGAGGGCAATGTCAGAGTCACCAGAGAACTGCCTGGACACACAGGTTATTTGTCATGTTGTCGCTTTTTGGACGATAGTCAGATTGTCACCAGCTCTGGAGATACTACATGGTGAGTCCATCACAGCGTTGAATGACCATTTTAATAGATTGTTTAACTTCAATTTTTAATTATATCATGAGTGCATTACATATATCACACAATGTATTTCTGAGCTAGAGGCAATGAGAATTAATTGAAGAATTTCATAGATGGGCATTTCATGATATTGTGTGATGAACTATTGTTAATTATCTTAGGGTTTTATGGTTTTCTCAAAGTTTTAGTACTGTTAAAATAATTCAGTCAGAAGTTCAGAAGTTTTTTTGCCCTGCTAATAGTTTCATATCCCACCACAAATAAGATAAATGTATTTTTTCTTCTAACAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_00458786_00461307.mRNA True 678 mRNA 0.41 4 458468 461307

Neighbor

gene id symbol gene type direction distance location
CI01000003_00418856_00424844 NA coding downstream 32499 418477 ~ 425969 (-)
CI01000003_00410927_00411601 SFT2D3 coding downstream 45960 410569 ~ 412508 (-)
CI01000003_00388122_00389931 DUSP28 coding downstream 68441 388122 ~ 390027 (-)
CI01000003_00364162_00366637 NA coding downstream 91831 364081 ~ 366637 (-)
CI01000003_00301515_00302754 NA coding downstream 155566 301515 ~ 302902 (-)
CI01000003_00473640_00508021 PEX5LB coding upstream 12269 473576 ~ 508021 (-)
CI01000003_00640353_00641395 NA coding upstream 178635 639942 ~ 644060 (-)
CI01000003_00719773_00720087 NA coding upstream 258276 719583 ~ 720332 (-)
CI01000003_00806620_00830978 NA coding upstream 345044 806351 ~ 831623 (-)
CI01000003_01194276_01196374 BAMBIB coding upstream 732009 1193316 ~ 1197019 (-)
G22709 NA non-coding downstream 7352 450523 ~ 451116 (-)
G22781 NA non-coding downstream 18288 439122 ~ 440180 (-)
G22704 NA non-coding downstream 50157 406420 ~ 408311 (-)
G22767 NA non-coding downstream 80576 377605 ~ 377892 (-)
G22756 NA non-coding downstream 120206 338052 ~ 338262 (-)
G22798 NA non-coding upstream 69499 530806 ~ 531021 (-)
G22807 NA non-coding upstream 101901 563208 ~ 563430 (-)
G22810 NA non-coding upstream 106691 567998 ~ 568221 (-)
G22698 NA non-coding upstream 109147 570454 ~ 573928 (-)
G22716 NA other downstream 388724 50512 ~ 69744 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015168 GNB4 coding NC_007113.7 CM002886.2 5300405 ~ 5311253 (+)