CI01000004_03133701_03141953 (ACOT11, ACOT11A)


Basic Information

Item Value
gene id CI01000004_03133701_03141953
gene name ACOT11, ACOT11A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 3133674 ~ 3141979 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_03133701_03141953.mRNA
AGCTGCCGGACTTTCAGCACAGCAGCATGGCATCAAAGTCCAATCTAACGGACAATCTGCATGACCTTCATCTGGAGGATGAAGGGCAGCATCGCAATCGTTCAGAGGTGAAGATGAGCCAGATAGTGCTGCCCTGCCATGCCAACCACTGCGGAGAACTGAGCATCGGACAGCTGCTCAAATGGATGGACTGCACAGCATGTCTGTCTGCGGAGAGACACGCTGGATGCCCGTGTGTGACAGCGTCTGTTGATGACATCTACTTCGAGCACACCATTGGTGTTGGACAAGTGGTCAACATTAAAGCCAAAGTCAACAGGGCCTTCAACTCAAGCATGGAGGTGGGGATAGAAGTCAGCTGTGAGGACCTGTACAGTGGCCGTCATTGGAGAGTGTGTCAGGCATTTGCCACATTCGTCGCCAGACGCACAGATGGAAACAGGGTGCAGCTGAAGCAGGTTGTGCCCTGCACACACCAAGAGCAGGTGGAGCACAGTTTAGCAGCTGAGAGGAGGAGGATGAGACTTGTTCACCATGACATCATGCAGGACTTGCTCAACAACAAGACCTTTCAGAGAAGTATCAGTGACGAGAACCGTGATGAAGACGAGGCTGTGCCTACAGAAAGAACAAGAGTGGAAAGTGTCGAGCTAGTACTTCCTCCTCACGCCAATCACCAGGTCAACACATTCGGAGGCCAGATTATGGCCTGGATGGAAAATGTCGCCACTATTGCAGCCAGTCGTTTATGCAATGCTCATCCTACTATGAGGACCATAGACATGTTTTACTTCAGAGGCCCGTCCCAGGTTGGAGATCGTTTGGTTCTGAAAGCCATTGTCAATAACACATTCAAGAACAGTATGGAGGTAGGCGTCTGTGCAGAAGCCTATCACGGAGAGGAACCTCTGAGGCACATTAACAGCGCCTTCATGACGTTTGAGGTGCTGGATGAGAAAGGAAGGCCACGTCCACTACCTCCCATAAAGCCTGAACCTCAGGAGGGACATAGGAGATACCAGGAGGCTCTTGCCAGGAAGAAGATTCGACTTGATAGGAAATACATCATCTCATGTAAGCAGACTGAAGTGCCACTGTCTGTCCCATGGGACCCTAGTAATCAGGTGTATCTGAGCTTCAATAATGTGTCGGCCCTGAAAATGCTTGCAGCTAAAAACAACTGGGAACTCAGCTCAAAGAAGAACCATGTGAGTCTGTATACAGTGGAGGAGAGTCGGAGTCTGTGTTTTAGGGTGGAGTTTAAGATGGATATCCCAGCACAAAGGGCCTTCACCCTCCTCTCAGATCTCAACCGCAGACAGGAATGGGATCAACACTACACTCTGTGTGAGCTGCTCATTAAGGTCGATGAGGATGATTCCATCTATCGAGTTGTTACTCCTTCGGTCAGTGAAGGAGGAAAAGTTCAGGAATTCATTTTACTGGCCTCTAGAAGACCGCCTTGTGATAGCGGGGATCCGTATGTTATTGCCCTACGATCAGTTTCTCTACACACTCATCCACTCACAGAGGAGTTCAACAGGGGTGAGGTGGTCTGTGCTGGGTTTACCATTTATGAGGTGTCGAAAAGTGTCTCAAAGATTTCCTACTATAATCAGGCCAGTCCAGAAGTGATGCCGTACATCTCCACTGACATCGCAGGCCTCTCATCTAGTTTCTACTCAATATTCTGTGCATGCAGCCAGTATCTGCTGGACAACATAGTCAGCACCCCTACATTAACCCCTCCTACATTATGACTTGCTGCCGTCGTTTATGCTTTTAAA

Function

symbol description
acot11a Predicted to enable acyl-CoA hydrolase activity and long-chain fatty acyl-CoA binding activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid metabolic process. Predicted to be active in cytosol. Is expressed in cloaca; lens; proctodeum; and solid lens vesicle. Orthologous to human ACOT11 (acyl-CoA thioesterase 11).
acot11 Enables long-chain acyl-CoA hydrolase activity and palmitoyl-CoA hydrolase activity. Predicted to be involved in several processes, including acyl-CoA metabolic process; negative regulation of cold-induced thermogenesis; and response to cold. Located in cytosol and mitochondrial matrix.

NR:

description
Acyl-CoA thioesterase 11

GO:

id name namespace
GO:0006631 fatty acid metabolic process biological_process

KEGG:

id description
K12417 ACOT11; acyl-CoA thioesteraes 11

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_03133701_03141953.mRNA True 1787 mRNA 0.49 15 3133674 3141979

Neighbor

gene id symbol gene type direction distance location
CI01000004_03106070_03109051 NA coding downstream 24623 3106042 ~ 3109051 (-)
CI01000004_03070803_03073454 LHX8, LHX8A coding downstream 60193 3070616 ~ 3073481 (-)
CI01000004_02953160_02955378 NA coding downstream 178184 2953146 ~ 2955490 (-)
CI01000004_02834634_02863535 GREB1L coding downstream 270076 2832744 ~ 2863598 (-)
CI01000004_02812936_02825192 TROVE2 coding downstream 308482 2812853 ~ 2825192 (-)
CI01000004_03187077_03196194 MRPL37 coding upstream 45098 3187077 ~ 3196198 (-)
CI01000004_03204599_03205569 TCEANC2 coding upstream 62593 3204572 ~ 3206068 (-)
CI01000004_03214098_03222707 GLMNA, GLMN coding upstream 72119 3214098 ~ 3222707 (-)
CI01000004_03238528_03240932 GFI1AA, GFI1 coding upstream 96379 3238358 ~ 3241491 (-)
CI01000004_03244252_03265862 EVI5 coding upstream 101924 3243903 ~ 3266047 (-)
G26744 NA non-coding downstream 909 3132556 ~ 3132765 (-)
G26752 NA non-coding downstream 11414 3119950 ~ 3122260 (-)
G26751 NA non-coding downstream 16393 3116786 ~ 3117281 (-)
G26714 NA non-coding downstream 65141 3020161 ~ 3068533 (-)
G26691 NA non-coding downstream 166689 2965700 ~ 2966985 (-)
G26754 NA non-coding upstream 30431 3172410 ~ 3179358 (-)
G26820 NA non-coding upstream 72911 3214890 ~ 3215202 (-)
G26788 NA non-coding upstream 125704 3267683 ~ 3275721 (-)
G26810 NA non-coding upstream 158820 3300799 ~ 3306425 (-)
G26812 NA non-coding upstream 188766 3330745 ~ 3332243 (-)
CI01000004_01773383_01774888 INSL5B other downstream 1358733 1772928 ~ 1774942 (-)
G27746 NA other upstream 2036248 5178227 ~ 5203724 (-)
CI01000004_05617072_05627369 NA other upstream 2478404 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 3392848 6538904 ~ 6541252 (-)
G29388 NA other upstream 3489314 6631293 ~ 6631907 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location