XLOC_000695


Basic Information

Item Value
gene id XLOC_000695
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 53688977 ~ 53695555 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003172
CTGTGCTACTTGCTCCAGTAACAAAGGCCTTCCCTTTACTCTTTTCTGGATTTCTCTCATCTCGTCCTGATACTCTTTCTGTCTCTGGAGATCTTGTTTCCTGTTTATaagcCTGAACTCTTTTAGCTTGTTAGGGGATGTCTGAGCCAGGGTTACATGTGGATCGATGGCCTGAGCTCGCTTTGTGACCAGCTTCTGCAGCCTCTTCTCTCTCTGTTTTTGCTTCTCCCTCCatttctcctcctcttcttctgcttTCTTTCTGTGCTCGAGAACTTTTCTACTCGTGTAGGGGTAAAAAGCTTTCAGAAGTGAATCTTTGCTGGAGAGATGCCACTAAAGGGATGGCACTATTGGGCAAGACTGCGAGAACAGGGTTGGAGAGCACTTGATGCTGCCTTCAAGTCACAATGATTGCatttacagcagtgtttctcaaccaagtTCCTGAAAGACCACTGGCTCTGCACATTTCCCATGTTGCCTTAAGCAAACACAccttcagatcatcagctcattcgCAGAGACTGAAAAATCTGTGATTGGTGTGAAAGacaaagaagacatccaaaacatgcagtgttggtgggcctacaggaacatggttgagaaacactgatatagAGGATAAGCAAAACTCAATGTTAGTGCTAACATTGACTCAATAATGATGAGTACCAACTGCAGTGCTATAGGCGAAGcaaattaaaggcatagttcacccaaaactgaacatccTGTCATTATTCATTTGTCATCCAAACCTGTAGATACAACTGAAGAACGTTAGAGAacttgacttccactgtattttttatttttatattgtcaaTATGGATATCAATggtgttcagctttcttcaaatgatactcctttgtgtttaacagaagaagacTAACAAAGGTTTGGTACtgcttgaggatgagtaaatcacGTCTTTCCAATCCCctaagacctttgttcatcttctgagtgcaaatcaagatattttagatgaaatcagagagctctcttgtcctccatagacagcaagggtccTGAGATTTTCAAAGTCCAGGAAAGGAGCAAAAGCTTTGTCGAAACATTTCATGTGACCTCAGTGGCTCAAGAACATTTTGTTTGGCTTTGTTCGCCAATGTCTTCCATGTCAGATTTGGGTGTGTGTTTACTATGAGCAATATGGTGCTTGCATGTTACACTGCTTATCCTAATGGCAGTATGTCATAATGGTCATAGTAAATGTGCGCAATGGTCTGTCACGGAATAAAAGACAAATataaacaaagttgtttttacagctttttggtgcacaaaagtgttcttggagcatTGTGTGATTAAACTTTGTTATGTTTTTGGTTGCTTCTCTGAACTTTGAAAGTCTCCATGGCTGTGTTTTGAGGTTgagagagctcctggatttcatctaaaatatattcatttgatTTCAGAAAATGAGCAAAGGTCTCAAGGGATTGGATTGACATGAGGGTCAGTAAGTAATaatggaattttcatttttgggtgagctaatcCCTTTGAAGTCGACATGAAACAGAATTTAAGATTATTCCTTTGTCCCAAGTACATCCATTTGAAGGTGAcgaggtggcgcagtaggtagtgctgtcggctcacagcaagaaggtcgctaaaaTAATCATAGACTGACGAATGAATGAAGGCAGAGGAGAAATGAGACATGccctgatagctccaccctaaatgattgatagctccaccctaaaggaattCTATGTGACCAGGGAGGTTGTGCCTTTTGATTAACGATTCTACAGACACATGAATTATTACTAAATAATGAAATGCACAGATACATCTTTATAACAATAGCTactatatacagctgaagtcagaattattagccctcgtttatttttttccccaatttctgtttaacggagagaaaaaaaatctaaacatttctaataataatagttttaataactcatctctaataactgatctattgtatctttgtcatgatgacagtaaataatatttgactagatattttcaagacacttctatacagcttaaagtgacatttaaaggcttaactaggttaattagggtaattaggcaggttagggtaattaggaaagttattgtataacgatggatgttctgtagattatccaataaaaaattgcttaaaggggctaataatattgtccctaaaatgtttttaaaaaaattaaaaactgctttcattcttgccgaaataaaacaaataagactttctccagaagaaaaaatattatcagacatactgtgaaaatttccttcctctgttaaacatcacttagaaaatatatatataaaaaaaaaaatttaaatcgaGAGGGGGggggtaattctgacttcaactgtacatatgaaAATAAGAAGAGTATATTTTGATTTGATGATTTGATTTGACTTTAATGATGATTCCTATGAGAACTTGAAGGCAGCAGGAGGATTCGGGAGCATCCATAAGTGAACACAACACAGCTCAGATTTTCCACACAGGATCAGAAGTCTTGTACTGCTAACGGAGTTACTAAGGGGAGCAGGGAATCATTTAGGGTTTAAAGGAGAGTTCGGTctcactgttacctcacagcttCTTGCCGTTTCTTAGCAGCATCAGTAATCTTAGCAGACAAACATTCCTGGCTTCCGGAAAGCGAGGAGCAAAGAGAAGATGAAGGCGTCCTGGGCGAAAGGACAGGCGTGTTCACAAATGGCCAGCGCGATGGTTTTGGGCTCTGTATTTCTGCTTGGATTTCCGCCATGATGCGTTCTTTGTGCGATGTGATGTTAGCTGTGCGCAGTTGGAATGGTTCGCATGATGTGACAGGCATCACCTCTTTACGTTTTGCCAGCTGCTTCCGAAACCTCCTGTAGCTGGCATCGAAATCTGGCACTTCAGCGTTGATTTTGGGCTGGTGTGTCTCTTCGGCATCTTTAACGATGAtcttttgagtttgtttttcgCTGAGCTGACGCGCAAGCATGCTAGGAGGCATGGATGCAGTGTGTAGCATCTCTCTCGCCCGCATCTGCATTTTAATTGCCCTGTAGAGTTCCTCCTCTTTCTGTCGCTCGCCCAACGTGGCTTCCTTCACCGCCTTTGGGACAGGTTTGGCTTTAAACGGGCACTTCCTCCTCTCCTCTTCCTCTTTGTTACGCTGAAGTGTTTGCTCGCGTAGCTTGGCGTCCTTCTGTTCTTTCTTCAACCGTTCGCGCTCCAGGAAGCGGAAGGGTTTCTGAGAGATGTGAAGACGCTGCTGTTCAAACTCCAGATGGAGTCTTCTTCGCTCTTCATTACGCTCCTGCAGATCTTCATACAACGGGAGGCGCACATGGGCAGGAATGGGACTGGCACGAAACTTCTTCTGGCACTCGCTGAGCTCTTCCAGCTGCCGTCGGAGATCCGCGTTCTCTTGCTCGATCTCAGATCGCGATTTTACACCCTTCTTGCGCCATTCTGCCTCTCGGACGGTCATCTGGAAAGGCTTCGGGACTGTCACTCTCGGATGCCAATCCTCATGATGCTTGTGTTTTTTCGCCCGCTGACTTCTAATCCTTTCTTTGGGTTTGCTAATACCCTGGCAGTCTGCTGGTAGACTATGCACTGAGGAGGACATGGGGTGCCGGTGAGGTGGAGAAAGCTTATTAACGCTAAAGTCCTGCCACATGTTTTTAATGTGTTCTTTCGGTGAGATAAGAAGGCCTTTCTCCGTGTTGCGATCTCCTTGGCCTTCTTCGTCAGACAAATCAGATGGATCTGAAGTCCGTCGTAACTCTAAAGCAGACTGGGCTTTTTTCAGACCGCTGGTTATCACTGGACTTCCTTGTGGGGATCTGTGAATTTAAcaattttcttttacttttaattccaaagtttaagggtgctttcacacctgccttatttagttagATTGAATCGGACTAGAGTTCGTTTTTCCTATTTAGTGCGGTTCGTTTaagcaggtgagaatgcagcaatcgtattcgagtgcgcaccaaaagcggaccaaataagcgtaccgagacctgcttgaagaagtggtctcggtacgctttcaaaccaaccctggagcggtttgtttgtggtgagaatatgatccgtgctaaaacaggtccaaccgcaaaaagtactgcgccttttggactaatccagctgccgtaggctgatgcgctgtgcattatgggatatggaggaaaaatagttgttgacagcgcttttccaacagagagagagagagagagaggggaaaacgttacctgatggatcattggtaatatttccgcaagatgaccatgtggcagtttagctaaattaattcacgtctcctcctgaagtgacgagcgatgcattaaaacactgttttccagccacagccgcgcttcattctcgaaatgtatagtttgtctaaagcagggaaaCAATcagtgcagtcgtc

Function

GO:

id name namespace
GO:0061134 peptidase regulator activity molecular_function
GO:0030414 peptidase inhibitor activity molecular_function
GO:0004857 enzyme inhibitor activity molecular_function
GO:0030234 enzyme regulator activity molecular_function
GO:0016215 acyl-CoA desaturase activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003172 True 4476 lncRNA 0.42 2 53688977 53695555

Neighbor

gene id symbol gene type direction distance location
XLOC_000694 NA coding upstream 30688 53656231 ~ 53658289 (+)
XLOC_000693 si:ch211-213b8.4 coding upstream 153412 53515089 ~ 53535565 (+)
XLOC_000692 NA coding upstream 178354 53508505 ~ 53510623 (+)
XLOC_000691 NA coding upstream 197672 53490099 ~ 53491305 (+)
XLOC_000690 ucp1 coding upstream 300063 53374454 ~ 53388914 (+)
XLOC_000696 pus10 coding downstream 19179 53714734 ~ 53730536 (+)
XLOC_000697 NA coding downstream 65242 53760797 ~ 53770739 (+)
XLOC_000698 ifngr1 coding downstream 146789 53842344 ~ 53863308 (+)
XLOC_000699 NA coding downstream 168973 53864528 ~ 53865837 (+)
XLOC_000700 nup133 coding downstream 223555 53919110 ~ 53941906 (+)
XLOC_000689 AL935166.1 non-coding upstream 320943 53364510 ~ 53368034 (+)
XLOC_000687 NA non-coding upstream 367639 53320931 ~ 53321338 (+)
XLOC_000703 NA non-coding downstream 287059 53982614 ~ 53988776 (+)
XLOC_000710 CABZ01067150.1 non-coding downstream 490484 54186039 ~ 54186156 (+)
XLOC_000712 NA non-coding downstream 581688 54277243 ~ 54469289 (+)

Expression


Co-expression Network