CI01000004_11608619_11618346 (MALRD1)


Basic Information

Item Value
gene id CI01000004_11608619_11618346
gene name MALRD1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 11608619 ~ 11618427 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_11608619_11618346.mRNA
AGCCTCATGAATCTTGTCAAGAGGGCATGTTCACATGTTCCAACCGTGTGTGTGTGGAGCCGAACAGAGTATGTGACTACAGCGATGACTGCGGTGATGGCACTGATGAAGAGCTCTGTGATGTAAAGGGCTATAAGCATCGCTGCAGTTTCGAGCAGGGCATGTGCTCGTGGGAAAACAGTGACTTGGAAGCTGGCTGGATTTTGCAGAAGGGAGAACAAGCCTGGCCCAAGCATGGACCACCAAGAGACCACACCCGTAACACTGCAGCAGGTCATTACATTACTCCAGCACATGAGATCCAGACAGCAGAGATCATCTCCAGAACCCTGCTGCCCAGCTCTGATTGCACCGTGAGGTTCTACCACTACTCTCACGGTGACAGCACTAATTCCAGGCTAGTCGTCACACTGAGGATGCTTCGTAATGGAGATGATGACAAAATACTTTGGGACAAGACTGTGACGCAGAGCTTCCTCTGGCACAGAGCAGAAGTTACATTTTCTACCTCAGTTAAGAGCAAGATTGTTTTCCAGTATGTGGGAAACGGTGAGACTCAAGCATCGCAAACAGCGGTGGATGATATTTCCTTCTCTGTGACATGTGTTCATGATCCTGACAACAGTGAGCTGCCAGTCACACCCGAGCCAACAATGACACCAGCTACAGCAACTACAACAATGACTGATGCTCCTTCGGCTTCAACAACAGTCAACCCTTGTAAGGAGAATGAATTTCACTGCTGGCGGTCAGATGGTGTAACATGCATTGCAGCTGGTGCTCAGTGTAATTATGTCCTAGACTGCCCTCTAGGGGAAGATGAAGAAACCTGCGGACACTATATGCAGACATTTATCATGGATCCATCTAAGAACGAGGCTGTGTTTCAGAGCCCATCCCTGCCTATCAGCTCTGCATACTGTCAGATTCTGTTTCACTTCCACATAGGTGCAGGAAGTGCAGGCAATCTTAGCGTGATCCTACAGAGGGGAGATGACAGGAAGCTGCTCTGGACACGATCCAGCAGCACTTCAACTGAGTGGGTCCCAGAACACTTACCACTGGGCAAACAAGACCAGACTTACAGGATCATTTTTAGCAGCCAGACTTCACTCACTACATCTCAGACCACTGCCCTGGATGATGTCTCCTTCCACAACTGTGAGCAGGACTATAAACCTCCAGACTTTTCCTTGGCCACATGCTCCTTTGAGAAGGACTTGTGTGGGTGGATCCAGGGAGCTGCAGAGGACCTAGACTGGGAGAGATGGAGCGGACCTACTGAGACCCCAAATACAGGTCCTTCAGGTGACCACACCAGTGGAAAGGGGTATTATTTGTACATCAACAGCTCAAATCATGCTAGAACTGGGGATATGGCTCATTTGAAGTCTCCTCTGTCGCCCCCCACTGAACCTGATGGGTATTGCTTCACGTTCTGGTATCACATGTTTGGAGCAACAGTGGGATCATTAAGAATGTCTATATATGACATTTCATCCAACCACATCACATTAATGTGGCAAAGGAAGGGGTCTCAGAGGAATGAATGGCAGTTGGCTCAGAGTCATGTGAAACTGACAAAAGTTCATCAGATATTAATTGAGGCTTCAGTTGGAGGACTGTCTGGGCACATTGCTATAGATGATTTATCTGTCACTAAAGGTGCCTGTGCTCCCACAGAGGGGGATTGTGGCTGGATACAACAGGCCGACGATGACCTGGACTGGATCCGAGTGTCAGGAAATAATGTAAAATCTAAATCTATACCTGGTTTCGACCATACAACCAACACAGCAAATGGATCCTACTTTTATATGGAAAGAGCGCCTACCCATGTGCAAGGACATCGTGCAATAATGACATCTCCTCTGTATCAAACAGGTGATGCCAAGTGTCTCCAGCTATGGTATTACATGGAGGGACAAGGCACTGGGACCCTAAATGTGTATCAGCAGTTCTCAGACAAAGATCAGCCCCTGCTGGAGACCAAGTCTGGAGAGCAGGGAGGACTGTGGAGGTTTGCCCAGACCCCTCTAACCCTCTCAGGGTCAAACTACAGAATTGTGGTGGAGGGGATTGCGGGCCAGACTGAACAGGGAGTCATAGCGCTTGATGATGTTCAGGTTTCAAACTATCCCTGCACTCCTTCAGGACACTGTGACTTTGAGGCAAACTTCTGCAGCTGGATGAATCTGATGGAGGTGGATGATGCAGACTGGCTCAGAGCCCAGGCAGGCACTGGAAATCACACACGACCCAGTTATTACCTTTATATGGACAGTTCTGTGGGGTTCTGGGGAGACACTGCCATGATTCTGAGTGAGATATTCACACCTGACAGCAGGGGGCACTGCTTCACATTCTGGTATCATATGTATGGACACAATGTTGGGACGCTCAGATTATACATCAACAACAGGACCATCCATAACAGCGGGAATAAGTTTGGCCAGATAGTATGGGTGGAGTCAGGAGATCAGGGCGATGTCTGGATGAGAGGAAACATTTATGTGTCATACCAAGAGCCTTTCTGGTTTATATTTGAATTCCTGAAGGGAGCAGGTCCTAAAGGAAGTATAGCCATTGATGATATTCACATTATTTCCGGGCCTTGTGACACAGATTCCACCTCACCATCTCCGCACTCTCGTGACACTGTAGGTATTGGTGTTGGAGTGGGAGTGACACTTTTGGTGATATTTACTGTTGGTGCTGTCCTTTTTGTGCTGAATAAAAAAAGAAAAAGGGAATCTATACTTGAAGATGACGTGCTTAATAGAAACTTTTCTTATAGCCCCTTTGACTGCAACATGAGTGGTTTAACATCCACAGCAGAGAACGGCAACTCCAGTGACTTAAGGAAAATGTCACTTTCACCAGATGAAAATGACGCATCTTTCACATAAAATGAGCAATCACAAACTGAGAAACAGATCTTCTGTGTCACATGTCATCTTTATGCCATCTATATTCCTGTTATACTGAAA

Function

symbol description
malrd1 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human MALRD1 (MAM and LDL receptor class A domain containing 1).

NR:

description
MAM and LDL-receptor class A domain-containing protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_11608619_11618346.mRNA True 2990 mRNA 0.47 21 11608619 11618427

Neighbor

gene id symbol gene type direction distance location
CI01000004_11598169_11606266 MALRD1 coding upstream 2336 11598169 ~ 11606283 (+)
CI01000004_11592217_11595358 NA coding upstream 13261 11592217 ~ 11595358 (+)
CI01000004_11547197_11557429 CACNB2B coding upstream 51065 11547197 ~ 11560552 (+)
CI01000004_11520078_11522835 NA coding upstream 85526 11519927 ~ 11523093 (+)
CI01000004_11505808_11516796 STAM coding upstream 90437 11505808 ~ 11518182 (+)
CI01000004_11622516_11634475 NA coding downstream 4089 11622516 ~ 11634925 (+)
CI01000004_11666900_11667179 NA coding downstream 48473 11666900 ~ 11667659 (+)
CI01000004_11668089_11670426 ACKR4A coding downstream 49276 11667703 ~ 11670922 (+)
CI01000004_11747225_11747971 RNF182 coding downstream 128109 11746536 ~ 11748095 (+)
CI01000004_11750356_11765031 RANBP9 coding downstream 131338 11749765 ~ 11766104 (+)
G31690 NA non-coding upstream 42464 11515811 ~ 11566155 (+)
G31677 NA non-coding upstream 142248 11466036 ~ 11466371 (+)
G31665 NA non-coding upstream 201714 11406674 ~ 11406905 (+)
G31664 NA non-coding upstream 202008 11406286 ~ 11406611 (+)
G31721 NA non-coding downstream 74428 11692855 ~ 11694150 (+)
G31723 NA non-coding downstream 75960 11694387 ~ 11696280 (+)
G31727 NA non-coding downstream 88157 11706584 ~ 11706970 (+)
G31737 NA non-coding downstream 130098 11748525 ~ 11748761 (+)
G31625 NA non-coding downstream 172570 11790997 ~ 11803727 (+)
G30797 NA other upstream 1110831 10497376 ~ 10497788 (+)
CI01000004_08976512_08980033 TTPA other upstream 2627635 8976254 ~ 8980984 (+)
G28859 NA other upstream 3009016 8599235 ~ 8599603 (+)
CI01000004_08414451_08436256 NA other upstream 3157392 8414316 ~ 8439933 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 3952236 7654234 ~ 7656383 (+)
G31710 NA other downstream 18824 11637251 ~ 11642400 (+)
G31865 NA other downstream 573703 12192130 ~ 12197418 (+)
CI01000004_12646972_12652534 NA other downstream 1024327 12646838 ~ 12652570 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 2405120 14035393 ~ 14039142 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location