CI01000004_14910312_14915166


Basic Information

Item Value
gene id CI01000004_14910312_14915166
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14910114 ~ 14915979 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_14910312_14915166.mRNA
GTTTAAAAGAGCTTGCTCAGCCTCATGTACGCTCAGTGGGCTTCCAGGCACATGAGGCACAGTGGCTGAGTAACAACAAAGGAAAAGGGGGGAAAAAACCCACAAGGGATCTTAGTGGCTGTGGAACATCTGATTTACTTCAAAATAATCTGATTACATGCAGAGACAGACTAACATACACCAGCATTAAACATCAGAATGTATGTGCCCGGGGCCGTGTTGGCCCTCTGCCTGCCCTGCTTTTTGAGTGGGAACGTGTTTGGTTATGAATATGGAGAGGATTACTCTGATTCCTACTATAATGAAATCTCCAATGGTGACCGCCTGAAAACAGGAGCTACGCAGATTCCCTGTCCGCCGCAAGACTTCTCACGCTGGGACAAACTGTTCATCATGCTGGAGGACTCTCAGATGAAGCAAGACATGTTCTTGCAGCAGTGTGAGGACATGGTTAAGGCGGAGATGGACACCATACGGAAGGAGCTCCATAAGCTTAACAACAACAAAGCGTGCGTCCAGCTCAGAGAGGCTGCAGATACGTATCAAGCCCAAAACAATGAGACGTTGCAGCAGCTCATTCAGTTCAGCAGGAACCAGGCCTCCCGTCTCACCAAACTGGAGAGCAACTCACTGCTAGGAGCAAGTCTGGGGCAAGTGGCCATGAAGTCATTCTCTGCTTATCCAAAGGAACAAGAAGCAAGCAATGCAGATGGCGGGAAGCTGGAGAGAGCGCTAATGGCCACCGCTGCAGATCTCCAAAGGGTACATGTCCAGCTGGCCCTTTTCCAAAGAGCAACGGCACACCGTTATCTGCCCTCAGGCTGTGAAATGGCTTTATTATTCCCAATGCGCTCCAAGCATATCTTTGCAGAGGTATCACCCTCCATGTCCATGTCCCTACGATCATTCACCATCTGTCTGTGGGCCAAAGTGACTCAGTCTCTAAATAAAACAGTGCTTTTCTCTTACGGACCCAAAAAAAACCCTCAAGAGCTCCAGCTTCTCTTGGCAAGGCGCTCGGTGCTCCTCACGGTGGGCGGTGAGACCCATCTAGTGGAAGCCCACAGCGTAGTAACAGATGGCCAGTGGGGACACTTCTGTGCAGCTTGGAGCTCGGAGCAGGGGCTTGCCACTTTATGGGCAAATGGAGAGAACGTTGCCAGAGTGCCTGGAGTAGCCGAGGGACACGTATTGTCCGGTGACGGCTTCATTCTGCTCGGGCAAGAGCGCAGCCGCTCGGGTGTCTACAGAGATCTGGATTCATCAGTTGCCTTCACTGGAAAAATGACAGGGGTTAACATGTGGGACCACGTGCTGGAAGCAGAAAGGATTAAAGAGTACGCCAATCACGATGGATCCTGTGATTGCCGTGGGAATGTGATTGGATGGGGTGTTTCAGAGATCATTCCACATGGTGGCGCTCAATATATCAACTGAGACTGCACCAATAATATCTATCACTATAGAATGTTTTATATTATATTGAATATTATCACTGATTTTGTAATTACCTTCTTTCTCATTCCAAATAGAAAGCACTACTTAATAAAGGGATAATTGATCCAAAATAAATTTCTGTTATTGTTTACTCTGTCATTGATACACAGGGCAACTTTTTGAGCAATGTTGCGGGACAATTTTGCCGAGCGATGATGCATTGAGAATGGGCAACAAATTTGGATACTTTAAGATTGAAATGTGTTGCCCATTCTCAATGGGAAAGCGCCCAAGCAACATCGCTCAGCAAAACTGCCCGGCAACATTATGACTTTGTGACTTCTGTGGAGCACAAAAAAAAAAGATACTTTGTGTTTTTGTCTATACATTGAAAGTCAATGGGGTGCAATGGACTTTCACTGTATAGCAAAAACAGCTGAAATAATCTTCAAAACATATTATTTACTACAGAGCCCCTAAGGTACGGAGCCCCTAAAGGGACATGGTGGTGGAAAAAAATATGAGATAAGAGGAAAATAATAAGTCAACCCAAAGTTTCTCAGGAGAACACAAAACATTTGCACGAGAACGCAAAAGCATTGCCAAATAATTTTTCCTCCCATCTCATATTTTTCTTCTTCACCATGTCCCTTTAGGGGCTCTGTAATACGGAGGGTGAGTAAATGAAGACTGAATTTTTATTTTTGTATGACCTCTCCTTAAAACACTGTACAAAAAACCAATAAGAATAGTTTAATATTGTGTCTTCTTTTTTTATTTTAGCACATTAAGGAGTAAATCATCAACATGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_14910312_14915166.mRNA True 2250 mRNA 0.45 3 14910114 14915979

Neighbor

gene id symbol gene type direction distance location
CI01000004_14889786_14894594 KLHL6 coding upstream 15192 14889786 ~ 14894922 (+)
CI01000004_14877615_14885956 PAK2A, PAK2 coding upstream 23615 14877460 ~ 14886499 (+)
CI01000004_14864427_14865483 ING5B, ING5, ING5.L coding upstream 44361 14864098 ~ 14865753 (+)
CI01000004_14507781_14513019 NA coding upstream 396670 14506560 ~ 14513444 (+)
CI01000004_14498216_14504721 NA coding upstream 404959 14498054 ~ 14505155 (+)
CI01000004_14919607_14929407 GOLIM4B coding downstream 3496 14919475 ~ 14929407 (+)
CI01000004_14934532_14938094 NA coding downstream 17895 14933874 ~ 14938094 (+)
CI01000004_15010164_15028433 NRD1A, NRDC coding downstream 94185 15010164 ~ 15028708 (+)
CI01000004_15048166_15051524 NA coding downstream 132187 15048166 ~ 15052817 (+)
CI01000004_15056504_15062261 RABGAP1L2 coding downstream 139943 15055922 ~ 15063180 (+)
G33951 NA non-coding upstream 56672 14845345 ~ 14853442 (+)
G33924 NA non-coding upstream 101825 14768014 ~ 14808289 (+)
G33919 NA non-coding upstream 117999 14758132 ~ 14792115 (+)
G33662 NA non-coding upstream 374770 14535078 ~ 14535344 (+)
G33644 NA non-coding upstream 381333 14528530 ~ 14528781 (+)
G34004 NA non-coding downstream 120038 15036017 ~ 15036233 (+)
G34009 NA non-coding downstream 129263 15045242 ~ 15045445 (+)
G34017 NA non-coding downstream 178126 15094105 ~ 15094375 (+)
G34027 NA non-coding downstream 187371 15103350 ~ 15103577 (+)
G34028 NA non-coding downstream 187987 15103966 ~ 15104168 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 873214 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 2254403 12646838 ~ 12652570 (+)
G31865 NA other upstream 2714967 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 3242455 11666900 ~ 11667659 (+)
G31710 NA other upstream 3267714 11637251 ~ 11642400 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other downstream 175265 15091200 ~ 15097173 (+)
G34220 NA other downstream 1023378 15939357 ~ 15939950 (+)
G33815 NA other downstream 1147436 16063415 ~ 16066464 (+)
G34400 NA other downstream 2061349 16971995 ~ 17025976 (+)

Expression


Co-expression Network