LOC122344888 (LOC107746395)


Basic Information

Item Value
gene id LOC122344888
gene name LOC107746395
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14057263 ~ 14059780 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238507.1
AGGAAGtgcaaaagagaaaataaaagaaaatcagcACCACAGCTATTTTTTCAGCTTCAGCGCTTGTGATATATGATTCTAAGAACTATGCATGTGCAGTTATAAAGTGCTTGTGAGCGTGATGGAGCTTCAGCAGCATTTTCCTGTGTCCGTGAATGATTATGAAGAAAATGAAGGAAATGCAGAGAAGAGGGAGaaaaatgatgcttttaaaACAGAAGATCTTTATCAAAGTCTTCAGTTCCCACCTACTGCACACCATGGAACTACTGACAGCACGACCCTGCTCTCAAAACGCTGTGAAAGAAAGTACGTGTTTTTACTGTTTGCTGTGAACGCTTTTATCTCAGCCATCATCCTTGTCATTGTGGGCTTAAACTACTCTCACAACAGAGAAACACAACcaataaaaggacaaaaagAATTGTGGCTTCTCCATgacaatgtgttttatttgttctggAGTAAGCAGAGTGATTGCGGCTCTGCTGAGAGCTTCTGTTCTGAGAGGAATGCCAGCCTGGCCATTTTAACTGAGCATAACAAGGCCTGGTTGATGTCCAGAACCAATGGAAAGCAATTTTTAGTCTTGAGAGCCTCATCAGATGGATCCGGAGGCACTGCTTCTGCACCAGTGctgccttctcacctgtggctcgtTAGCTCCTTAATTGCTCCCCCTACTTAAGctccctttgtttgcagtcttgtgtctgatcGTTGTGGTGTGAGGATGCTACCAGTGtctccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtcctgTCCAGTCCTGTccagtcctgtcctgtcctgtcctgtcctgtcctgtcctgtcctgtcctgtcctgtctgtCTAGGCTCCAAGTTCAGctggtattttttttagttttttcctcttcgttcgctctgcctttttgttgtttttttttccagacctCCGAACCCCTGTGCCGGGCCTGGTTCCTCCGGTGCAGTGTTTGGCAGTTCGCTCTCACCTGATCCGCTGGATCTGATGTTGGACTCGAGCAGCAGGACTGTAGAAAGAGACTCTATCAAGTTTCCCGGTTTTTGCTCCCAGCCTAAGAGGAGTGACTGGAggctgttttgagtttttcttcGGACGTTTTCTGTTCCTCCGCTCCGGTCAAGTTTTTGTTCCATGTCTACTAATAAACTAAGTTGAACCTGCAATTGAATCCGTGTTCGTTCCTGACAGACTGTGGCATTTTGGCTGAGGATGTTAACACAGGACATGGAGAAGgatttgtgtgtgagaggatagtcaaaaataattgattttgatGACTTTTGAAGCTGCAAAGGATGTACTGGACAGCTCCTTGGCTCAAAGTTCACCCTCCAGCATGTATATGAGTTGTACttcatttatcatgttttttttaatgaataaatctcTTCTTTGTAACTACTAGACAGAA
>XM_043238508.1
GGAAGtgcaaaagagaaaataaaagaaaatcagcACCACAGCTATTTTTTCAGCTTCAGCGCTTGTGATATATGATTCTAAGAACTATGCATGTGCAGTTATAAAGTGCTTGTGAGCGTGATGGAGCTTCAGCAGCATTTTCCTGTGTCCGTGAATGATTATGAAGAAAATGAAGGAAATGCAGAGAAGAGGGAGaaaaatgatgcttttaaaACAGAAGATCTTTATCAAAGTCTTCAGTTCCCACCTACTGCACACCATGGAACTACTGACAGCACGACCCTGCTCTCAAAACGCTGTGAAAGAAAGTACGTGTTTTTACTGTTTGCTGTGAACGCTTTTATCTCAGCCATCATCCTTGTCATTGTGGGCTTAAACTACTCTCACAACAGAGAAACACAACcaataaaaggacaaaaagAATTGTGGCTTCTCCATgacaatgtgttttatttgttctggAGTAAGCAGAGTGATTGCGGCTCTGCTGAGAGCTTCTGTTCTGAGAGGAATGCCAGCCTGGCCATTTTAACTGAGCATAACAAGGCCTGGTTGATGTCCAGAACCAATGGAAAGCAATTTTTAGTCTTGAGAGCCTCATCAGATGGATCCGGAGGCACTGCTTCTGCACCAGTGgatgatgaagattgtgactgtgtcatgacttcagtctgatcagtttgtttttgtttttctgtcaaacattctgccatgtgcttgtgtgttccCGCCCCATTGTTATCTCATTAATCACTctagctgccttctcacctgtggctcgtTAGCTCCTTAATTGCTCCCCCTACTTAAGctccctttgtttgcagtcttgtgtctgatcGTTGTGGTGTGAGGATGCTACCAGTGtctccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtccagtcctgTCCAGTCCTGTccagtcctgtcctgtcctgtcctgtcctgtcctgtcctgtcctgtcctgtcctgtctgtCTAGGCTCCAAGTTCAGctggtattttttttagttttttcctcttcgttcgctctgcctttttgttgtttttttttccagacctCCGAACCCCTGTGCCGGGCCTGGTTCCTCCGGTGCAGTGTTTGGCAGTTCGCTCTCACCTGATCCGCTGGATCTGATGTTGGACTCGAGCAGCAGGACTGTAGAAAGAGACTCTATCAAGTTTCCCGGTTTTTGCTCCCAGCCTAAGAGGAGTGACTGGAggctgttttgagtttttcttcGGACGTTTTCTGTTCCTCCGCTCCGGTCAAGTTTTTGTTCCATGTCTACTAATAAACTAAGTTGAACCTGCAATTGAATCCGTGTTCGTTCCTGACAGACTGTGGCATTTTGGCTGAGGATGTTAACACAGGACATGGAGAAGgatttgtgtgtgagaggatagtcaaaaataattgattttgatGACTTTTGAAGCTGCAAAGGATGTACTGGACAGCTCCTTGGCTCAAAGTTCACCCTCCAGCATGTATATGAGTTGTACttcatttatcatgttttttttaatgaataaatctcTTCTTTGTAACTACTAGACAGAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107746395

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238507.1 False 1548 mRNA 0.46 6 14057263 14059780
XM_043238508.1 True 1670 mRNA 0.45 6 14057264 14059780

Neighbor

gene id symbol gene type direction distance location
apoa1a LOC107663408,LOC107599208,LOC107746394,LOC107661262,LOC107734125,LOC107596115 coding upstream 16204 14038970 ~ 14041059 (+)
pafah1b2 pafah1b2,LOC107661198,LOC107734127,LOC107663423,LOC107599209,LOC107746392 coding upstream 20094 14033447 ~ 14037169 (+)
tmprss4b LOC107599211,LOC107663417,LOC107746388,LOC107734130,LOC107661196,LOC107596117 coding upstream 42887 14010323 ~ 14014376 (+)
panx1b panx1b,LOC107746435,LOC107663420,LOC107734119,LOC107548450,LOC107596208 coding upstream 73535 13978210 ~ 13983728 (+)
epd LOC107596209,LOC107661259,LOC107734118,LOC107663416 coding upstream 80243 13975414 ~ 13977020 (+)
si:ch211-284e13.5 LOC107746441,LOC107599206,LOC107661202 coding downstream 28651 14088431 ~ 14092482 (+)
hsd20b2 hsd20b2,LOC107596111,LOC107661247,LOC107734140,LOC107663385 coding downstream 64329 14124109 ~ 14130049 (+)
gnb2 gnb2,LOC107663406,LOC108428986,LOC107661206,LOC107746402 coding downstream 86189 14145969 ~ 14156534 (+)
gltpd2b LOC107663399,LOC107746407,LOC107734136,LOC107661211,LOC107596106,LOC107580519 coding downstream 161820 14221600 ~ 14225996 (+)
mogat3b mogat3,LOC107746411,LOC107663414,LOC107661213,LOC107752358,LOC107596103 coding downstream 216315 14276095 ~ 14280289 (+)
G36420 LOC107663407,LOC107599223,LOC107746393,LOC107661199 non-coding upstream 9769 14046777 ~ 14047494 (+)
G36408 LOC107746439,LOC107663381,LOC107599230 non-coding upstream 49861 14005771 ~ 14007402 (+)
G36406 NA non-coding upstream 53732 14000526 ~ 14003531 (+)
G36405 NA non-coding upstream 56926 13999100 ~ 14000337 (+)
G36332 NA non-coding upstream 82504 13974532 ~ 13974759 (+)
G36503 LOC107599196,LOC107663386 non-coding downstream 261776 14321556 ~ 14326754 (+)
G36507 LOC107663397,LOC107567468,LOC107599188,LOC107746779 non-coding downstream 282143 14341923 ~ 14342507 (+)
G36509 LOC107567468,LOC107752360,LOC107661217 non-coding downstream 283384 14343164 ~ 14343769 (+)
G36510 NA non-coding downstream 286104 14345884 ~ 14346835 (+)
G36573 NA non-coding downstream 406119 14465899 ~ 14466241 (+)
ins ins,LOC107596207 other upstream 71557 13984097 ~ 13985706 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other upstream 1249912 12803789 ~ 12807351 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other upstream 1352018 12703352 ~ 12705245 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other upstream 1528473 12514013 ~ 12528790 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other upstream 1801591 12249138 ~ 12255672 (+)
G36495 NA other downstream 230640 14290420 ~ 14292500 (+)
LOC122345142 NA other downstream 240263 14300043 ~ 14305304 (+)
LOC122345214 NA other downstream 273243 14333023 ~ 14337765 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other downstream 287782 14347562 ~ 14349991 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other downstream 586165 14645945 ~ 14652911 (+)

Expression


Co-expression Network