G43895


Basic Information

Item Value
gene id G43895
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 9268333 ~ 9269090 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU65025
ctgaagtttgtttattaagcgtgcagaacaaccacccaataaagcattacaataacctcgaggtcataaacgcatgaattaatatttctgcattagaggttgaaaggataggtcgtaatttagatatatttttaagatggaaaaacgcagttttacagatgctagaaacatgattttcgaaggaaagattgcggtcaaacagcacacctaggttcctaactgatgatgaagaattaacagagcagccatcaagtgataggctgtgttctagattattatatgtggggtccaattattagcacctctgttttttcagaatttaacattaagaagtttctcatcatccagctttttatatcgactatgcattctgttagattctcaatttggtgtgtatgaccaggctgcgctgaaatatagagctgagtatcatcagcatagcagtgaaagctaacaccatgactcctgataatatctcccagaggtaacatgtacaggttgaaaagtaacggtcctagcactgagccttgaggaactccatatttcacttgtgattgatatgatacctcctcatttaatgccacaaactgatagcggtcagataggtatgatttaaaccatgctaaggcgcttcctctaatgccaacatagttttctagtctatccaagagaatgttgtgatcgatagtatcgaatgctgcgctaagatctaatagcactaataatgagataaaacctCAATCCGATGacaaaagcag

Function

NR:

description
beta-1,3-galactosyltransferase 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65025 True 758 lncRNA 0.38 1 9268333 9269090

Neighbor

gene id symbol gene type direction distance location
LOC122346991 cep95 coding upstream 199672 9035026 ~ 9068661 (+)
polg2 polg2 coding upstream 257424 9002581 ~ 9010909 (+)
ten1 ten1 coding upstream 313079 8951326 ~ 8955254 (+)
aanat1 aanat,aanat1,LOC107742556 coding upstream 381952 8884440 ~ 8886381 (+)
cygb2 cygb,cygb2,LOC107698994 coding upstream 664532 8564382 ~ 8603801 (+)
p4hb p4hb,LOC107553316,LOC107591928,LOC107701207 coding downstream 661680 9930770 ~ 9940743 (+)
ppp1r27b ppp1r27,LOC107710012,LOC107591937,LOC107553297 coding downstream 671816 9940906 ~ 9943224 (+)
ccdc40 ccdc40,LOC107710029,LOC107669524 coding downstream 680761 9949851 ~ 9958610 (+)
card14 card14,LOC107710011,LOC107669523,LOC107553296 coding downstream 691278 9960368 ~ 9973522 (+)
LOC122347046 cbx4,LOC107710010,LOC107669529,LOC107553295 coding downstream 744799 10013889 ~ 10018092 (+)
G43891 NA non-coding upstream 5249 9262529 ~ 9263084 (+)
G43885 NA non-coding upstream 8556 9258993 ~ 9259777 (+)
trnar-ccg_25 NA non-coding upstream 182188 9086073 ~ 9086145 (+)
LOC122346517 NA non-coding upstream 183380 9082597 ~ 9084953 (+)
G43861 NA non-coding upstream 198330 9068841 ~ 9070003 (+)
G43901 NA non-coding downstream 3283 9272373 ~ 9273065 (+)
G43902 NA non-coding downstream 4214 9273304 ~ 9273542 (+)
G43904 NA non-coding downstream 6085 9275175 ~ 9275636 (+)
G43905 NA non-coding downstream 6650 9275740 ~ 9275999 (+)
G43918 NA non-coding downstream 36795 9305885 ~ 9306166 (+)
G43889 NA other upstream 6471 9260633 ~ 9261862 (+)
G43879 NA other upstream 14593 9253149 ~ 9253740 (+)
G43745 NA other upstream 530932 8590104 ~ 8737401 (+)
lhfpl4a lhfpl4a,lhfpl4,LOC107716887,LOC107656118,LOC107586345,LOC107710167 other upstream 926187 8315037 ~ 8342146 (+)
G43585 NA other upstream 1022320 8245167 ~ 8246013 (+)
LOC122346821 endov other downstream 93052 9362142 ~ 9430655 (+)
G43962 rptor,LOC107728013,LOC107700860,LOC107553319 other downstream 517750 9786840 ~ 9811575 (+)
pecam1b NA other downstream 646960 9916050 ~ 9926257 (+)
LOC122346828 mcrip1,LOC107710264,LOC107553315,LOC107710031,LOC107591941,LOC108424716 other downstream 675428 9944518 ~ 9947929 (+)
dgke dgke,LOC107669536,LOC107710025,LOC107710026,LOC107669537,LOC107553311,LOC107591925,LOC107701198 other downstream 710775 9979865 ~ 10040364 (+)

Expression


Co-expression Network