trnas-cga_4


Basic Information

Item Value
gene id trnas-cga_4
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 3999611 ~ 3999692 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1084
GTCAcggtggccgagaggttaaggcgttGGACTCGAAATCCAATGGGGTTTCCCCGCACAGGTTCGAATCCTGTTCGTGACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1084 True 82 tRNA 0.57 1 3999611 3999692

Neighbor

gene id symbol gene type direction distance location
nabp1b nabp1b,LOC107660018,LOC107584808,LOC107736130,LOC108424604,LOC108255000 coding downstream 219 3996205 ~ 3999392 (-)
myh11a myh11,LOC107581334,LOC107706684,LOC107551906 coding downstream 50934 3921589 ~ 3948677 (-)
pglyrp2 pglyrp2,LOC107706687,LOC107678189 coding downstream 78774 3917437 ~ 3920837 (-)
rasal3 LOC107706685,LOC107581335,LOC107678190,LOC107551908,LOC107713095,LOC107660012 coding downstream 82693 3908235 ~ 3916918 (-)
wiza LOC107678187,LOC107581336,LOC107706686,LOC107551909,LOC107660010 coding downstream 92413 3899715 ~ 3907198 (-)
cavin2b sdprb,LOC107706678,LOC107660017,LOC107705535,LOC107581341,LOC107677589,LOC107584807 coding upstream 739 4000431 ~ 4013550 (-)
tmeff2b tmeff2b,LOC107677530,LOC107706676,LOC107705517,LOC107659984,LOC107581412,LOC107584844 coding upstream 19996 4019688 ~ 4068108 (-)
LOC122347098 iqcb1,LOC107677558,LOC107706625,LOC107581415,LOC100006122 coding upstream 215884 4215576 ~ 4220734 (-)
ccdc14 LOC107706670,LOC107677612,LOC107581416 coding upstream 222045 4221737 ~ 4227930 (-)
si:ch211-113j14.1 si:ch211-113j14.1,LOC107706665,LOC107584802,LOC107677609,LOC107659991,LOC107581419,LOC107705485 coding upstream 300328 4300020 ~ 4310955 (-)
G42392 NA non-coding downstream 19022 3979900 ~ 3980589 (-)
G42390 LOC107581410,LOC107551903,LOC107660016,LOC107713092,LOC107677531 non-coding downstream 20533 3974097 ~ 3979078 (-)
G42354 NA non-coding downstream 41872 3956214 ~ 3957739 (-)
G42331 LOC107096619 non-coding downstream 144079 3853260 ~ 3855532 (-)
LOC122346554 nfil3-5,LOC107706633,LOC107581326,LOC107678196,LOC107659971,LOC107713076,LOC107706696,LOC107678192,LOC107581323,LOC107659968 non-coding downstream 199161 3785899 ~ 3800450 (-)
G42514 NA non-coding upstream 173050 4172742 ~ 4173892 (-)
G42520 LOC107706673,LOC107581344,LOC107705518,LOC107584804,LOC107660123,LOC107677606 non-coding upstream 184748 4184440 ~ 4185118 (-)
G42522 NA non-coding upstream 186672 4186364 ~ 4187095 (-)
G42524 NA non-coding upstream 188008 4187700 ~ 4188711 (-)
LOC122346891 NA non-coding upstream 252142 4251834 ~ 4254043 (-)
G42351 NA other downstream 38069 3958367 ~ 3961542 (-)
cep20 fopnl,LOC107706683,LOC107713084 other downstream 45280 3952528 ~ 3954331 (-)
cep170ab cep170l,LOC107581301,LOC107678228,LOC107672679,LOC107567737,LOC107753897 other downstream 891673 3092540 ~ 3107938 (-)
G41955 LOC107735028,LOC107705557,LOC108430057 other downstream 1156353 2840662 ~ 2843258 (-)
G41781 NA other downstream 2292203 1702833 ~ 1707408 (-)
cdk15 cdk15,LOC107706659,LOC107677597,LOC107660030 other upstream 394715 4394407 ~ 4415213 (-)
nudt15 LOC107584789,LOC107705561,LOC107706649,LOC107677555,LOC107660035,LOC107581358 other upstream 494220 4493912 ~ 4497418 (-)
dnah9l dnah11,LOC107581427,LOC107677540,LOC108430841,LOC108272446,LOC103372266,LOC104955736,LOC107740597,LOC102781332,LOC107384434 other upstream 709598 4709290 ~ 4738542 (-)
gpr155b gpr155b,LOC107740589,LOC107581372,LOC107584777,LOC107705544,LOC107677583,LOC107660045 other upstream 766689 4766381 ~ 4774546 (-)
LOC122347558 cycsb,LOC103040542,LOC108273362,LOC108430847 other upstream 818499 4818191 ~ 4825466 (-)

Expression


Co-expression Network