rasal3 (LOC107706685,LOC107581335,LOC107678190,LOC107551908,LOC107713095,LOC107660012)


Basic Information

Item Value
gene id rasal3
gene name LOC107706685,LOC107581335,LOC107678190,LOC107551908,LOC107713095,LOC107660012
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 3908235 ~ 3916918 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241499.1
CGCCTCATACCTACAAGAGCCGAGGACCACAAAGGTTGCATCATTTCAAATGAGCCAATAGGTGAAGTGAGCAGAAAATGAAATGCGAAGcactaaaaatttaaaaaagacgTATAAAGACATCTAGAACTGGTAAGTGCTGAGGAATCCATACTCTTTGAGATACTACAAGAAAATACAAACTTTAAATTGCATCAAAACATCCTGTGCCAAGAAAACGTGCTGATTTGGGTCACGGAGTAGCATTCAAGATGGGTACAAACAAAGATCCAAGTGCTGAGCAATCAGCACCACAGATTGAGGAAGACATGGATCTGTCTCCTGAGCAGAACAGTCCAGTTGATCAAGACCAACGGCAACCAGAGGATGGCAAGTTACTCAACACGTACAAATGGCACACAGGAGCCAAGCCTGAGACGGCAGCACAGGGGGCCATTGAGAGGCTTGAGAAAGGGGCTTcaaataaatggaataaaatgcaGAGTTGGCGCAAAGCTCTGAGTGAAGACGCGGGGGAAAAGTGCTCGACTGCTACACGAGGGAGCGAAAGCCCATCTAAACTGGACAAGCCAGCAACTTCACGGAAAAACCCTTTTCGCAGAGCTCTTTCAGAGCCACCAGGGTCCCTCCTATCTTCGGTTCTGTCCTCCTCTTCTGCTTCTGGGTCCTCCGGCAATCAGGCATCTGGGTCCACTGTCCAGGACACAACTCAAAAGGGTAAAATAAGGAAGTACCTGCAAACTGTTTCACAGAAGTTCAAAAGACAGCGTCTGCAGAGTGCTGCCATTGTAGAGCATGaaacgTGTGATCCTGAGATCCTAGTCCAAGAGCCTGTTCGCCTCTCCTGGGCCCCTCCACAAGACGTTCCCGTTTGGGATATTAGCTACTGCTTTCTTCAGGATGGACAGATTCTTATACCACGTGAGGAAGAGCCTTTGATGAGAGTACGAAACCGGGCCAGCAGTTGTCTTTCCAGCCTCAGTCTCCAGAACATCAGTGGAAGTCACACTGAGCTAAACCCAGATCCTGTGGTCCCCCAGAGTGGTACCAAAATCAAAGGGCAAGATGGTGGTGTCAAAAATAGAATCAAGCGACGCTTTGGTGAGGATAAACGGAAAAGCAGCACACAGATCAATACTGCAGGACTAAGTGTTGCTGCAAGGTATGGCTCCAGAGAATCTCTATCCATTCCAGTCAGTGCGGCAAAAAGCCTTGATCTTAGCACCGACCAGACTACCGTCATCAGGCCAGTCCACAGCTCGATTCTAGGGGAGAAGTACTGTTTTCAGGTCATCAACTCTGAGAATAACCACTGCTTCGGGTGCAGTTCAGCTGCAGAAAGAGATCGCTGGATTGAAGACTTGCGTCGTGCTGCTCATCCAAATAAGGACAACTGTGAGCGCACTGAGTACTCACTGAGCCTTTGGGTTAATGAAGCAAAAGACCTTCTCCCAAAGAAGCGATATTATTGTGAGGTCCACCTTGATGGTACCTTGTTTGCTCGTACCAGTAGCCGGGCTGTGGGGAAGTCTGTCCAACGCTCCAGCCAAGCAGTTGATGGAGGATCTGGAACGGCTGGCACAGGCCATAGTGGTGGTGCTTCAGGAGGTTGCCAGCTATTCTGGGGCGAATTTTTTGAACTTGAAAACTTGCCCCCTGTAAACCAGCTCACCCTGCACCTCTTTAAAGATGAAGACTCCAAAAAGAAGCGTCATTCCAAGGATGATTCTATTCTGCATCCTCTAGGAAGTGTGGCTCTCAATTTGGCAGATATAAAAGGACGGGCCTATCAGGAGAAGTGGTATCCCATCGTGCCCTACAAGCCCCCAGGAACAAGTACAGCAAAGGACCAGATTGGCCCACAAGCTTCCCTTCGAGTCAAGTCCAAATTCAAGATCCTGAAAATTCTGCCTATTGAGAGGTACAAGGAATTTGCAGAATATATTACAGTGAATTATGTGGAAATGTGCAGCAGCCTCGAGCCCCTTCTCAGTGTACGGGAGAAAGAAGAACTTGCAGGAGCACTTGTTCATGTGCTCCAGAGCATTGGAAAAGCTAAGGAGTTCTTGGTCGAACTCGGCAGTGCAGAAGTTCAGCGTTTGGGAGAAAATGAGGCTTTGATTTTCAGAGAGAATACACTGGCCACAAAGGCTATTGACGAATATATGAAATTGGTGGGTCAGAAGTATCTTATTGACACACTTGGTGACTTCATAGCCAGACTATATAGTGGAGGAGAGAGCTGTGAAGTAGACTCGCAGAAATGTTCTGCCTCTGATCTACCAATCAATCAGAGACATCTGAAGGAGACGTGTGCAGATGTTGTAAAGAGAATAACTGACATGCAAGACTCATTCCCCGCAGAGCTGAATGAGATTTTTTCCAGCTGGGTATCAGATTGTGAGGACAGAGGTCAAACAGACATTGGACACCGTCTCATATCAGCATCTCTGTTTCTTCGATTCTTATGCCCAGCGATCCTCAGTCCATCACTCTTCGGGCTCACCCAAGCCTATCCAGAACCAAACACCCTTCGTACTCTCACTCTGACAGCCAAGGTCATTCAAAACCTTGCAAACTTCACCTTGTTTGGCGAAAAAGAAGAGTACATGCTTTTTATGAATGAGTTTCTAGAACAACACTGGGAGCCTATGAGAGGATTCTTACAGAAAGTATCTGACCCAGACAGTGAAATTGCCATGGCTCGATTTGATGGATATGTTGACCTGCCTCTTCGTCTAGCAGTCCTTCACAATCTACTAGTCGACATTATCTCTGTAATGAAACAGGACCAAATAGACAATCTGCATCCACTGCCTTCAATCCTAAACCAGATAACGGAGTTCCTTGGCCAGGAAGCTCAACGGATCCCTGTTAGTAGCGTTCATGGAACACCAAAGCCTACATATTTACCTCCAAAAGATCTCCCCAAGTACAGCCCATTACAAAACTCCATGCAGCAGCTTCCCATAGATTCAAAACCCAACCAAGGCAAAGAACGTCAGCGTAAGCAGGTGCAGCGGGCTTTTAGTGTCCCCAACAGACCATCACGGCATCAGAGGCAACCAGTGAAGAGGCAGGCAAGCAATGAAGAGCTACCAACGCAGTGCCAGGACTATAATCCAGATCAAGATCCCTGCTTGGAAATTTCATCACCTAGCAATGCCATAAAAACCAAAGCACCAGCTGCAAAAGTACTCTGgatcaaacaaaacaacagcaacgaGCCCTATCAAAAAGCAGGACAAGAGCAAGAAGAGACAAGCATATTAGACAGGCATGCGCAAGAGTTGGGAGAGCTGCGTCTGGGCGTGGAGCAGGTTACCGAGCGTGAGCTCGAGATGGCCAAGCGGTTAGAAGACTTTATAGTCCTGACTCAAGAACAGAATACACAGCTACAGGCAGAGGTTCAGGAACTTCGAAATCTGTTAGCCATCCGCGAAGAACAGCTGGCAAGCACAACtttcagACTGGGCGTCatagaagaagagagagaggaagacgaAAGAAAGCTTAATGTTGCTGTGGCTGCAGTAGAACGCATGAATGTTTTGGAGGAGCAGTTTGCTGGATTGTTGAAAGATGTGCAGCAACGCTATGCAGTTAATGCTGATGGCATGAGACAGACTTACATCAATACCTGATGCAAAACAGGAAGTTACTGGTGTGGTGTGTTACATAGTGCCATTTTAGAATGCTATTAGCTTTTGTTagatttcttttattcattgatAACACTGTGTTTTTGTGGATTTATGCTGGTTAAACCTGCTGGTCACAATTAAAACCAAATCTATTATCAACACAATGATATActgtagtaaaaatatatatataaatgaatggatATGCATGAGACTTTTTTGTAGActttcacaaataaaatgtgcattaaacaaA
>XM_043241500.1
TACCATCGTAACTGGGTGTACCATACCAGAAGACGACTAAGACTGAAGGGCTGTGCTgtttagttcactcaaaataagCATGTGGGACCCTTATATTAATAGtgaaaaaaggtcatttttgaGTCTAATGTTctgaaaggggaaaaaaaaatattctgaactACTCCAAAGCATGGGTTTCAGACGTTGGATTGTATGTGGAGGGGCACTagAGCTAAACCCAGATCCTGTGGTCCCCCAGAGTGGTACCAAAATCAAAGGGCAAGATGGTGGTGTCAAAAATAGAATCAAGCGACGCTTTGGTGAGGATAAACGGAAAAGCAGCACACAGATCAATACTGCAGGACTAAGTGTTGCTGCAAGGTATGGCTCCAGAGAATCTCTATCCATTCCAGTCAGTGCGGCAAAAAGCCTTGATCTTAGCACCGACCAGACTACCGTCATCAGGCCAGTCCACAGCTCGATTCTAGGGGAGAAGTACTGTTTTCAGGTCATCAACTCTGAGAATAACCACTGCTTCGGGTGCAGTTCAGCTGCAGAAAGAGATCGCTGGATTGAAGACTTGCGTCGTGCTGCTCATCCAAATAAGGACAACTGTGAGCGCACTGAGTACTCACTGAGCCTTTGGGTTAATGAAGCAAAAGACCTTCTCCCAAAGAAGCGATATTATTGTGAGGTCCACCTTGATGGTACCTTGTTTGCTCGTACCAGTAGCCGGGCTGTGGGGAAGTCTGTCCAACGCTCCAGCCAAGCAGTTGATGGAGGATCTGGAACGGCTGGCACAGGCCATAGTGGTGGTGCTTCAGGAGGTTGCCAGCTATTCTGGGGCGAATTTTTTGAACTTGAAAACTTGCCCCCTGTAAACCAGCTCACCCTGCACCTCTTTAAAGATGAAGACTCCAAAAAGAAGCGTCATTCCAAGGATGATTCTATTCTGCATCCTCTAGGAAGTGTGGCTCTCAATTTGGCAGATATAAAAGGACGGGCCTATCAGGAGAAGTGGTATCCCATCGTGCCCTACAAGCCCCCAGGAACAAGTACAGCAAAGGACCAGATTGGCCCACAAGCTTCCCTTCGAGTCAAGTCCAAATTCAAGATCCTGAAAATTCTGCCTATTGAGAGGTACAAGGAATTTGCAGAATATATTACAGTGAATTATGTGGAAATGTGCAGCAGCCTCGAGCCCCTTCTCAGTGTACGGGAGAAAGAAGAACTTGCAGGAGCACTTGTTCATGTGCTCCAGAGCATTGGAAAAGCTAAGGAGTTCTTGGTCGAACTCGGCAGTGCAGAAGTTCAGCGTTTGGGAGAAAATGAGGCTTTGATTTTCAGAGAGAATACACTGGCCACAAAGGCTATTGACGAATATATGAAATTGGTGGGTCAGAAGTATCTTATTGACACACTTGGTGACTTCATAGCCAGACTATATAGTGGAGGAGAGAGCTGTGAAGTAGACTCGCAGAAATGTTCTGCCTCTGATCTACCAATCAATCAGAGACATCTGAAGGAGACGTGTGCAGATGTTGTAAAGAGAATAACTGACATGCAAGACTCATTCCCCGCAGAGCTGAATGAGATTTTTTCCAGCTGGGTATCAGATTGTGAGGACAGAGGTCAAACAGACATTGGACACCGTCTCATATCAGCATCTCTGTTTCTTCGATTCTTATGCCCAGCGATCCTCAGTCCATCACTCTTCGGGCTCACCCAAGCCTATCCAGAACCAAACACCCTTCGTACTCTCACTCTGACAGCCAAGGTCATTCAAAACCTTGCAAACTTCACCTTGTTTGGCGAAAAAGAAGAGTACATGCTTTTTATGAATGAGTTTCTAGAACAACACTGGGAGCCTATGAGAGGATTCTTACAGAAAGTATCTGACCCAGACAGTGAAATTGCCATGGCTCGATTTGATGGATATGTTGACCTGCCTCTTCGTCTAGCAGTCCTTCACAATCTACTAGTCGACATTATCTCTGTAATGAAACAGGACCAAATAGACAATCTGCATCCACTGCCTTCAATCCTAAACCAGATAACGGAGTTCCTTGGCCAGGAAGCTCAACGGATCCCTGTTAGTAGCGTTCATGGAACACCAAAGCCTACATATTTACCTCCAAAAGATCTCCCCAAGTACAGCCCATTACAAAACTCCATGCAGCAGCTTCCCATAGATTCAAAACCCAACCAAGGCAAAGAACGTCAGCGTAAGCAGGTGCAGCGGGCTTTTAGTGTCCCCAACAGACCATCACGGCATCAGAGGCAACCAGTGAAGAGGCAGGCAAGCAATGAAGAGCTACCAACGCAGTGCCAGGACTATAATCCAGATCAAGATCCCTGCTTGGAAATTTCATCACCTAGCAATGCCATAAAAACCAAAGCACCAGCTGCAAAAGTACTCTGgatcaaacaaaacaacagcaacgaGCCCTATCAAAAAGCAGGACAAGAGCAAGAAGAGACAAGCATATTAGACAGGCATGCGCAAGAGTTGGGAGAGCTGCGTCTGGGCGTGGAGCAGGTTACCGAGCGTGAGCTCGAGATGGCCAAGCGGTTAGAAGACTTTATAGTCCTGACTCAAGAACAGAATACACAGCTACAGGCAGAGGTTCAGGAACTTCGAAATCTGTTAGCCATCCGCGAAGAACAGCTGGCAAGCACAACtttcagACTGGGCGTCatagaagaagagagagaggaagacgaAAGAAAGCTTAATGTTGCTGTGGCTGCAGTAGAACGCATGAATGTTTTGGAGGAGCAGTTTGCTGGATTGTTGAAAGATGTGCAGCAACGCTATGCAGTTAATGCTGATGGCATGAGACAGACTTACATCAATACCTGATGCAAAACAGGAAGTTACTGGTGTGGTGTGTTACATAGTGCCATTTTAGAATGCTATTAGCTTTTGTTagatttcttttattcattgatAACACTGTGTTTTTGTGGATTTATGCTGGTTAAACCTGCTGGTCACAATTAAAACCAAATCTATTATCAACACAATGATATActgtagtaaaaatatatatataaatgaatggatATGCATGAGACTTTTTTGTAGActttcacaaataaaatgtgcattaaacaaA

Function

NR:

description
PREDICTED: RAS protein activator like-3-like

GO:

id name namespace
GO:0043547 positive regulation of GTPase activity biological_process
GO:0051056 regulation of small GTPase mediated signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005096 GTPase activator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241499.1 True 3900 mRNA 0.46 18 3908235 3916918
XM_043241500.1 False 3101 mRNA 0.45 16 3908235 3914983

Neighbor

gene id symbol gene type direction distance location
wiza LOC107678187,LOC107581336,LOC107706686,LOC107551909,LOC107660010 coding downstream 1037 3899715 ~ 3907198 (-)
ptger1a ptger1a,LOC107551910,LOC107678178,LOC107581435,LOC107713085,LOC107660121 coding downstream 25669 3878480 ~ 3882566 (-)
ilf3a LOC107706689,LOC107678210,LOC107660009 coding downstream 30139 3868098 ~ 3878096 (-)
acp5a acp5a,LOC107678211,LOC107581333,LOC107659976,LOC107551911 coding downstream 41327 3864096 ~ 3866908 (-)
slc44a2 LOC107678199,LOC107581327,LOC107659973,LOC107551912 coding downstream 59385 3834182 ~ 3848850 (-)
pglyrp2 pglyrp2,LOC107706687,LOC107678189 coding upstream 519 3917437 ~ 3920837 (-)
myh11a myh11,LOC107581334,LOC107706684,LOC107551906 coding upstream 4671 3921589 ~ 3948677 (-)
nabp1b nabp1b,LOC107660018,LOC107584808,LOC107736130,LOC108424604,LOC108255000 coding upstream 79287 3996205 ~ 3999392 (-)
trnas-cga_4 NA coding upstream 82693 3999611 ~ 3999692 (-)
cavin2b sdprb,LOC107706678,LOC107660017,LOC107705535,LOC107581341,LOC107677589,LOC107584807 coding upstream 83513 4000431 ~ 4013550 (-)
G42331 LOC107096619 non-coding downstream 52703 3853260 ~ 3855532 (-)
LOC122346554 nfil3-5,LOC107706633,LOC107581326,LOC107678196,LOC107659971,LOC107713076,LOC107706696,LOC107678192,LOC107581323,LOC107659968 non-coding downstream 107785 3785899 ~ 3800450 (-)
G42235 NA non-coding downstream 369617 3535499 ~ 3538618 (-)
G42254 NA non-coding downstream 416974 3490922 ~ 3491261 (-)
G42080 NA non-coding downstream 618252 3288891 ~ 3289983 (-)
G42354 NA non-coding upstream 39296 3956214 ~ 3957739 (-)
G42390 LOC107581410,LOC107551903,LOC107660016,LOC107713092,LOC107677531 non-coding upstream 57179 3974097 ~ 3979078 (-)
G42392 NA non-coding upstream 62982 3979900 ~ 3980589 (-)
G42514 NA non-coding upstream 255824 4172742 ~ 4173892 (-)
G42520 LOC107706673,LOC107581344,LOC107705518,LOC107584804,LOC107660123,LOC107677606 non-coding upstream 267522 4184440 ~ 4185118 (-)
cep170ab cep170l,LOC107581301,LOC107678228,LOC107672679,LOC107567737,LOC107753897 other downstream 800297 3092540 ~ 3107938 (-)
G41955 LOC107735028,LOC107705557,LOC108430057 other downstream 1064977 2840662 ~ 2843258 (-)
G41781 NA other downstream 2200827 1702833 ~ 1707408 (-)
G41443 NA other downstream 3494682 225710 ~ 413553 (-)
cep20 fopnl,LOC107706683,LOC107713084 other upstream 35610 3952528 ~ 3954331 (-)
G42351 NA other upstream 41449 3958367 ~ 3961542 (-)
cdk15 cdk15,LOC107706659,LOC107677597,LOC107660030 other upstream 477489 4394407 ~ 4415213 (-)
nudt15 LOC107584789,LOC107705561,LOC107706649,LOC107677555,LOC107660035,LOC107581358 other upstream 576994 4493912 ~ 4497418 (-)
dnah9l dnah11,LOC107581427,LOC107677540,LOC108430841,LOC108272446,LOC103372266,LOC104955736,LOC107740597,LOC102781332,LOC107384434 other upstream 792372 4709290 ~ 4738542 (-)

Expression


Co-expression Network