G61290


Basic Information

Item Value
gene id G61290
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 5392294 ~ 5396169 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU90731
gctgataaaaacatcataataatccacaagtaatctaCACAGCCCCAGTCCACCAGTTAACgacttgtgaagtgaaaagttgCATGATTGTAAACAAATCAACAAAGacgtttttaacattttaccaTTTCTTCATGCTAAAATAAAGAGTCCCTTATCCATATTTCTTGCTACACTGAAAAGGTCTTCCCATCTGAATTTTGGAGCGAAAaactgcacagatcaagcacagTTTACAGCGGAAAAAAAAGGCCAATAGcgatataaaaatatgttggtggatttAAGAAGGATGGCTATTTTTATGAAGGAATCAGTGGAGGATGGAAACTTTTCTAGCTTAgatgttttgtcttgtttccagccaaaatatctagaaaGTCTTAAATCAATAAGGATTTTCTAGGCGAGTAAAAATGATGGTCTTGTTTGATAGTCTTGATAGTCTAAGTTTATGcttagaacaagcaaaataatctgacaatggggtaagcaaaattattttatttcaaacagaaaacaagattattttgcttaaccCATTGGCCTCTATCTAGGATAAGAAAGAATTTGTTGCAGTGTAGAAGTGAAGATTCAAAGTTCAAATGCTCAAATGCAAGTTCAAAAaaacttcacaagatgttaactgatggactagGTGTGTGGattattgagatgttttatCTGCTGTTTTTCTTGTCAAACCATCGGTCCTTTAATACTTAGTAAAACTAGCATAATGTTTTGGCTCTCGTTCTACCGGCACCCATTCAGTGTATTGTAATTCTATATTTCTCAATGctaaatctgatgaagaaacaaactcttccGCATCGTGGATGGCCTGAGAATGAGTAAATATTCagcaaattgttatttttgagtgaactattacatgatttaatagtaaaatgtcgacaaaggaaagaaaacagtGCTTGTCAAACCATTGGTgcttaaatataagtataactAGCATGTTAACTATTCACCGTTGGGCCGGCTTAACTTATCTGTACACCTGAAATCACACTTGTCAACATGTTCCTGACCTCACTGGCCTTGTTTAACGGTTGGTTACTCATCATCACGCATGAATACACAGACAGTAGCGTTTTAAAAAGTGAACAGCTCCTCCTGACACAATAAGACAATGTACGAAACCTTCAGTTAAACCAGTTTAAAACAGTCAGATGCTATGGGTTTGGTCGTGAATAACGGCACACGCGAGGACTCTAACCTCCTTTCCTGTCTCTTGTGCTTTGTTCAAGGATTTCCTCCCTGGTCTCCAGTATCTCCTGAAGTGCTGCCTGCAGCTTTCTAGGCAAGGACGGAGATAGAGCCCCCATCACAAAAGGCGTAGGAGAGCAGCATATGTCAAGCATGCTGGCAGGAAGCACCGGGACGAACGTGTGCTGCCACGTGAAGGGATACAGCAAAGCCAAGGCAGAATGGGCACATCGGGATAAGACACTGGCCATGGACAAATAGTGTTAGGTTCGAATTTAATTCTGGCAGGCATTCAGATTGCTATGTTTGGGTATCAGCCTGTACCTGAGTTTGTCCGCAATGAAGATAACTCTCCTCTCCAGCAGCAGAGAAGCGAAGACCTGCAAGAGTCTGGTCACACTGAGACACTGCAGCAAACTCTCAAAGTCCACGTGCTCCAAACGAGAGTCCACCGGCCTGCACAGAGTCagaacctacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90731 True 1723 lncRNA 0.40 2 5392294 5396169

Neighbor

gene id symbol gene type direction distance location
brpf3b brpf3,brpf3b,LOC107725302,LOC107674334,LOC107734521,LOC107653397,LOC107570975 coding upstream 53985 5325161 ~ 5338309 (+)
mapk13 mapk13,mk13,LOC107725303,LOC107598961,LOC107734522,LOC108265696,LOC108438563,LOC107653398 coding upstream 68446 5313534 ~ 5323848 (+)
LOC122349937 ift81,LOC107725332,LOC107599023,LOC106585468 coding upstream 165818 5208526 ~ 5226476 (+)
tbc1d22b tbc1d22b,LOC107653399,LOC107734531,LOC107674367,LOC107725284 coding upstream 327363 5020564 ~ 5064931 (+)
pim1 pim1,LOC107734527,LOC107674355,LOC107584899,LOC107598956,LOC107725309,LOC108438567,LOC103031835,LOC105889771 coding upstream 386853 5001545 ~ 5005441 (+)
fxn fxn,LOC107598972,LOC107566812,LOC107674317,LOC107664976 coding downstream 115246 5511415 ~ 5516121 (+)
LOC122349970 LOC107598973,LOC107566802,LOC107757293 coding downstream 151944 5548113 ~ 5605167 (+)
ift81 ift81,LOC107725332,LOC107599023,LOC106585468 coding downstream 243642 5639811 ~ 5658504 (+)
atp2a2a atp2a2,atp2a2a,LOC107757297 coding downstream 262647 5658816 ~ 5687208 (+)
ntng2a ntng2a,ntng2,LOC107674329,LOC107598980,LOC108438355,LOC107664998,LOC107557204 coding downstream 386722 5782891 ~ 5844422 (+)
LOC122350006 NA non-coding upstream 248170 5139729 ~ 5144124 (+)
LOC122349982 NA non-coding upstream 393197 4984630 ~ 4999097 (+)
G61189 NA non-coding upstream 474868 4891448 ~ 4917426 (+)
G61190 NA non-coding upstream 482108 4908923 ~ 4910186 (+)
G61160 NA non-coding upstream 538838 4852279 ~ 4853456 (+)
G61281 NA non-coding downstream 14171 5410340 ~ 5423462 (+)
G61312 LOC107664996,LOC107725301 non-coding downstream 53787 5449956 ~ 5453605 (+)
G61341 NA non-coding downstream 212431 5608600 ~ 5609423 (+)
G61345 fnbp1a,LOC107674371,LOC107757295,LOC107566801 non-coding downstream 224881 5621050 ~ 5621594 (+)
G61356 NA non-coding downstream 337999 5734168 ~ 5734479 (+)
LOC122350082 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108438565,LOC108264952,LOC105013926,LOC100700110,LOC105889737 other upstream 127928 5104570 ~ 5264366 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other upstream 162686 5226952 ~ 5229608 (+)
ccdc120a LOC107701815,LOC107674368,LOC107584880,LOC107727423,LOC107552222 other upstream 1318397 4029303 ~ 4073897 (+)
LOC122350109 LOC107743114,LOC107552217,LOC107674346 other upstream 1460806 3924861 ~ 3931488 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other upstream 1541737 3848614 ~ 3850557 (+)
G61678 LOC107665067,LOC107598994,LOC107757984 other downstream 1359936 6756105 ~ 6766543 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other downstream 1452312 6848481 ~ 6849711 (+)
soat1 soat1,LOC107549691,LOC107700347,LOC107657858,LOC107758003 other downstream 1909950 7306119 ~ 7529086 (+)
smim15 smim15,LOC107700545 other downstream 3081002 8477171 ~ 8478331 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other downstream 4308312 9704481 ~ 9705639 (+)

Expression


Co-expression Network