G63534


Basic Information

Item Value
gene id G63534
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 12640076 ~ 12640617 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU94068
GGGACTGTGTCGTCATGGAGACTTGGTGCCAACTGCGCTCTTCATATGCCAATCATGTGACACACATACACCTGTCCTGGCATCGGTCTGGGCACAGATGCCCATTGAGTCTGGCTGGCTGCAGGGAGAATATCTGATTCTGCTCTGCCAATCAAGTCCACAGACGGCTCTctgaagtctctctctctcacacacacacacacacacactggctggACATCTGCTGCCAAGTGACGCTAAAACAGCTGTTCATTTGCATCAGCACcaccaggtacacacacacacacacacacacacacacacacacacaaaagtcaGGCCCAAATGTTAATGAACTTGACTGAATGAGGTTAATGTCCTTTATTATACAAACTATATCAGTTTTGAATATATGCTATGAATGCTATGCTATGAATTACAATTGTTACAACACGTCATTAATATgatcattcatatatatataatacactgcTTATCTGTATCTCACTGCTCAGATCTTAAACTTATTGGGAAAAAttgaactaataaaataataactcgAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU94068 True 542 lncRNA 0.42 1 12640076 12640617

Neighbor

gene id symbol gene type direction distance location
borcs6 LOC107717508,LOC107669648,LOC107556497,LOC107711970,LOC107679501,LOC107591781 coding upstream 20469 12613978 ~ 12619607 (+)
sema3h sema3h,LOC107669646,LOC107591773,LOC107717498 coding upstream 27483 12595949 ~ 12612593 (+)
rhoab rhoab,LOC107591788,LOC107679616,LOC107556503,LOC108265880,LOC108425062 coding upstream 47686 12588270 ~ 12592390 (+)
tmem115 tmem115,LOC107711974,LOC107679556,LOC107669665,LOC107550514,LOC107591784 coding upstream 53490 12582950 ~ 12586586 (+)
cacna1sb cacna1sb,LOC107669632,LOC107707674,LOC107679379,LOC107591792,LOC107550462 coding upstream 98928 12522853 ~ 12541148 (+)
xpc xpc coding downstream 592 12641209 ~ 12649215 (+)
arih2 arih2,LOC107669654,LOC107556492,LOC107679480,LOC107717512,LOC107591779,LOC107711917 coding downstream 9665 12650282 ~ 12658853 (+)
impdh2 impdh2,LOC102785462,LOC107669669,LOC107717516,LOC107711965 coding downstream 19451 12660068 ~ 12670371 (+)
dalrd3 dalrd3,LOC107669664,LOC107717515,LOC107711963,LOC107591775 coding downstream 32995 12673612 ~ 12680375 (+)
celsr3 celsr3,LOC107679402,LOC107669597,LOC107591847 coding downstream 49419 12690036 ~ 12730976 (+)
LOC122350247 NA non-coding upstream 69650 12547744 ~ 12570426 (+)
G63218 NA non-coding upstream 312138 12240641 ~ 12327938 (+)
G63204 NA non-coding upstream 450597 12180187 ~ 12189479 (+)
G63207 NA non-coding upstream 500666 12131897 ~ 12139410 (+)
G63195 NA non-coding upstream 584829 12055042 ~ 12055247 (+)
G63538 NA non-coding downstream 90438 12731055 ~ 12732041 (+)
G63552 LOC107556489,LOC107717529,LOC107591772,LOC107711952 non-coding downstream 174348 12814965 ~ 12892529 (+)
G63665 kazna,LOC107711950,LOC107591771,LOC107669642,LOC107680131,LOC107717500,LOC107556484 non-coding downstream 311971 12952588 ~ 12953461 (+)
G63666 NA non-coding downstream 348850 12989467 ~ 13048261 (+)
G63689 slc16a1b,LOC107591766,LOC107711946,LOC107679710,LOC107717534,LOC107669643,LOC105907593,LOC108427596 non-coding downstream 414167 13054784 ~ 13055362 (+)
G63533 NA other upstream 1511 12638230 ~ 12638565 (+)
G63453 NA other upstream 148152 12490260 ~ 12491924 (+)
lamtor5 lamtor5,xip,LOC107668015,LOC106566397 other upstream 579879 12057657 ~ 12060197 (+)
LOC122350223 NA other upstream 589108 12047509 ~ 12050968 (+)
si:ch211-163l21.10 LOC107731153,LOC107549947,LOC107668018,LOC107745734 other upstream 782655 11853594 ~ 11857421 (+)
LOC122350405 LOC107556500,LOC107717521,LOC107669623,LOC107679608,LOC107591846 other downstream 103561 12744178 ~ 12747558 (+)
zgc:136971 zgc:136971,LOC107717528,LOC107669673,LOC107556470 other downstream 181417 12822034 ~ 12833000 (+)
G63676 NA other downstream 366805 13007422 ~ 13008830 (+)
kcnd3 kcnd3,LOC107711847,LOC107556323,LOC107594524,LOC107679777,LOC107669639 other downstream 799658 13440275 ~ 13522536 (+)
srxn1 srxn1 other downstream 1042444 13683061 ~ 13684369 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G223545 NA unknown CI01000052 null 1270492 ~ 1270927 (+)