G32494


Basic Information

Item Value
gene id G32494
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 12982429 ~ 12982669 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU36860
GTAAAATTTAAGTAAAATTTAGACAAAATATCAGGATAACAGACAGATGTCAATGGTGAATTAAGAACTCTTTATTTTTTATTGCCAACATTGAAGACACCTGATAACAAGCAGAATCACTGAAGGAAAGAGAAACACATGAAGTAACAGAGGTTTAGATGTTGATGTTGATTTTATTGTAAATGTTTGGTCACCATTATGGGGATCAGTATTCCATTTAGTTGGTCAGTTTCACTCTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36860 True 241 lncRNA 0.32 1 12982429 12982669

Neighbor

gene id symbol gene type direction distance location
CI01000004_12810922_12817913 VWC2L.2 coding upstream 163882 12810572 ~ 12818547 (+)
CI01000004_12764916_12775989 SLC6A9 coding upstream 206257 12764916 ~ 12776172 (+)
CI01000004_12719753_12721562 KLF17 coding upstream 260396 12718416 ~ 12722033 (+)
CI01000004_12696326_12707951 NA coding upstream 274433 12694377 ~ 12707996 (+)
CI01000004_12646972_12652534 NA coding upstream 329859 12646838 ~ 12652570 (+)
CI01000004_12984968_12997831 KISS1R, KISS1RA, GPR54 coding downstream 2299 12984968 ~ 12998063 (+)
CI01000004_13043279_13051835 NA coding downstream 60568 13043237 ~ 13051964 (+)
CI01000004_13062721_13076100 KIF2C coding downstream 80052 13062721 ~ 13076228 (+)
CI01000004_13197104_13205895 KLHL20 coding downstream 214435 13197104 ~ 13206585 (+)
CI01000004_13211489_13233786 DARS2 coding downstream 228820 13211489 ~ 13234194 (+)
G32491 NA non-coding upstream 4251 12977970 ~ 12978178 (+)
G32439 NA non-coding upstream 30322 12902537 ~ 12952107 (+)
G32431 NA non-coding upstream 128625 12852962 ~ 12853804 (+)
G32414 NA non-coding upstream 172354 12809617 ~ 12810075 (+)
G32382 NA non-coding upstream 200944 12704964 ~ 12781485 (+)
G32506 NA non-coding downstream 18778 13001447 ~ 13001761 (+)
G32513 NA non-coding downstream 29858 13012527 ~ 13012760 (+)
G32502 NA non-coding downstream 38665 13021334 ~ 13021822 (+)
G32538 NA non-coding downstream 49943 13032612 ~ 13032819 (+)
G31865 NA other upstream 787282 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 1314770 11666900 ~ 11667659 (+)
G31710 NA other upstream 1340029 11637251 ~ 11642400 (+)
G30797 NA other upstream 2484641 10497376 ~ 10497788 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 1040878 14035393 ~ 14039142 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other downstream 2108575 15091200 ~ 15097173 (+)
G34220 NA other downstream 2956688 15939357 ~ 15939950 (+)
G33815 NA other downstream 3080746 16063415 ~ 16066464 (+)
G34400 NA other downstream 3994659 16971995 ~ 17025976 (+)

Expression


Co-expression Network