XLOC_000715


Basic Information

Item Value
gene id XLOC_000715
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 54611838 ~ 54613479 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003179
TTCAATATTGTGAACGAAGTCTGTCTGATGGAGACTGCTGAACAAAGCTGCACTGATCTTTTCCTGGTGAAGATGGAGCAGATTGAAAACAATTAGGCAACACAGACACCAGATGTGGAGACGAAAACCTGCCAGCCGTCAGCTGGACAAGAACAGACGAGGAAAAGACCCTGTCTGACTAAACATTCTGTCACTTCTCATCAAAGCTACACAGGCGATACTGAACAGACTTTCACGTTCATATTCAAGCAAAGCCTCGAGAGACACTCACAAGGTCACACTGTAGAGAAGTATTTTACATGTTCTGAATGTGGGAAGAGCTTCGCCGAGAGACACAATCTTAAAATTCACTTGAgcattcacaccggagagaagcctttcGCATGCccccagtgtggaaagagctttagggttaccaactattccagcatatgttttacgcagcagatgcccttccagcggcaatccagtactgggaaacacccatacactatgcattcaaacacactctcattcattacggccaatttagtttacctaatTCTCCTATAGAGTATGTTTTTTGggctatgggggaaaccggagcacccaggaaacccacaccaacacgaggagaacatgcaaactccacacagaaacaccaattggc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003179 True 649 lncRNA 0.46 2 54611838 54613479

Neighbor

gene id symbol gene type direction distance location
XLOC_000714 si:ch211-202h22.10 coding upstream 3806 54606354 ~ 54608032 (+)
XLOC_000712 NA coding upstream 142549 54277243 ~ 54469289 (+)
XLOC_000713 NA coding upstream 207691 54401933 ~ 54404147 (+)
XLOC_000711 CABZ01067150.2 coding upstream 336977 54194801 ~ 54274861 (+)
XLOC_000710 CABZ01067150.1 coding upstream 425682 54186039 ~ 54186156 (+)
XLOC_000716 si:ch211-202h22.9 coding downstream 13012 54626491 ~ 54637378 (+)
XLOC_000717 si:ch211-202h22.8 coding downstream 24647 54638126 ~ 54648766 (+)
XLOC_000718 si:ch211-202h22.7 coding downstream 36569 54650048 ~ 54659923 (+)
XLOC_000719 gprc5bb coding downstream 60367 54673846 ~ 54680103 (+)
XLOC_000720 knop1 coding downstream 70176 54683655 ~ 54694012 (+)
XLOC_000703 NA non-coding upstream 623062 53982614 ~ 53988776 (+)
XLOC_000699 NA non-coding upstream 746001 53864528 ~ 53865837 (+)
XLOC_000721 NA non-coding downstream 84694 54698173 ~ 54700755 (+)
XLOC_000729 NA non-coding downstream 346013 54959492 ~ 54985297 (+)
XLOC_000733 CU467849.1 non-coding downstream 514986 55128465 ~ 55128579 (+)
XLOC_000735 NA non-coding downstream 571285 55184764 ~ 55191262 (+)
XLOC_000741 NA non-coding downstream 700995 55314474 ~ 55579436 (+)

Expression


Co-expression Network