CI01000006_00089909_00090850


Basic Information

Item Value
gene id CI01000006_00089909_00090850
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 89416 ~ 91108 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_00089909_00090850.mRNA
ATATTAAAAGGTGAGGGCTGGTAAAAATTCTTCAGTGAAGACTGACTTTATCAAGCAACATATGAATCAGATCTTTAAAGCAATAAATCAACTACCTTAGTAATAACAGAATACATCTGCAGTAAGTATGTGCCGCTTTATTAGACATTCAACTAATACTAGGTAACTACCAAGTATTTCAAAACTATACAGCATGTTTCTAAGACCATTGACATTTCTATTTATATGTAATACATACATTAAAGTGTTTCCATGTTTTGCAAAAATTCTGATTGATTTTCCATATTAGCACATGTAAAATAGTGTGGACTGTGAAATTTGTTCAGACAACAAGCCCTGTAAAACACACAAAAAAAAACAAAAAAAAAAAATCATAGGATGCAAAGTTTCTGATCATTAAAATCATGCATTTTACTTTCCTAAAGCTCATAAACAGTATTTCCGTGAGATGTCTGGTTGTTACTCTGTTTGCAGGTTTTGTGTAGAACAAGCAATGGACAACCTGACATTCAGAAACAGCATTCTTCTAGTGGAGGGACTTCAAGTTACACCTCAGTCTACCTATGTTGTTTTCATCCTGCTTCTTTTGGTTTATGTCTTTATAATGGTTTCCAATATTGCACTTGTAATTCTGATCTCAACAGAGAAGAATCTTCATCATCCTATGCATTTCCTGTTCTGTAACTTGCCACTGAATGATATATTAGGGACCACTGTCATTTTACCACGCTTATTGCAGGACATTTTAAAAGAAACTTCAGAGCGGTATATCACATATGTGGAGTGTGTAGTTCAAGCCTATTTTGTGCATATTTTTGTAGCAGCATGTCACTATGTTCTTATAATTATGGCTTTTGACAGATATGTGGCTATATGTAATCCATTGCGATACACGGCAATAATGACCAATAAAATGGTTATTAAACTATCAGCATCAGCCTGGGGGCTGTCAGTACTTATGGTATCAATTCTGATAGGACTCACTGTGCGTCTGTCTCACTGCAGATCTAAAATTGAAAACCCTTTTTGTGACAATGCCTCACTTTTTAAACTGTCCTGTGAGGATGGTGTGGTTGTTAATAATGTGTATGGAATCATTTATACTGTGGTTTTATTTACCTTCTCAATTTTGTCTGTATTTATAACATATGGCAAGATTGCTACTGTATGCATAACCAGCAAAAACAAAGCACTCAACAGCAAAGCCATAAAAACCTGCAGCACTCATTTAGCTGTTTATTTAATCATGCTTGTTTCTGGCTCCACTTTTATTTTTCTTCATCGTTTCCCTCTCTACTCTGAGAGCAGGAAACTAGCTAGTATAATGTTTCACATTGTGCCACCAGGATTAAATCCTTTAGTATATGGTTTACAAACCAAAGAAATAAGACAGAAGTTTGTAAAATTTTGGTGCAGAGAAAAAGGAACGTCTTAATTTATTATGTCATTAAATTAATATTCATTGGTATCAGCACTTAATGTGTAAAGTCAGTAACTGGAATACATACAAAGCAGTAGTCTTTAGTAACTTCTTTGTAACTTGAGAACTTATTTTAGTACTTAGAATTTAAACCAGTGTCCTCACATGGCAAGGTTTTACAATATTTTTATTACAGTAAAAGATCTACGTATATACCCTAAATTGTACTGAACATAATTTCTTGTACACTTTTTCATTTAGAAAATCTACTGA

Function

NR:

description
Odorant receptor, family F, subfamily 115, member 7

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04257 OLFR; olfactory receptor

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_00089909_00090850.mRNA True 1693 mRNA 0.34 1 89416 91108

Neighbor

gene id symbol gene type direction distance location
CI01000006_00075230_00076159 OR115-7, OR115-9 coding upstream 13018 74539 ~ 76398 (+)
CI01000006_00060296_00061324 OR115-7, OR115-9 coding upstream 27991 60232 ~ 61425 (+)
CI01000006_00039405_00040475 OR115-7, OR115-9 coding upstream 47830 39333 ~ 41586 (+)
CI01000006_00004261_00005202 NA coding upstream 83968 2802 ~ 5448 (+)
CI01000006_00110930_00139640 OR115-9 coding downstream 19266 110374 ~ 139894 (+)
CI01000006_00140414_00141739 NA coding downstream 48915 140023 ~ 142211 (+)
CI01000006_00143205_00144149 NA coding downstream 51657 142765 ~ 144542 (+)
CI01000006_00158417_00184263 OR115-7, OR115-2, OR115-9 coding downstream 67249 158357 ~ 184336 (+)
CI01000006_00278488_00290221 SSH2B coding downstream 187380 278488 ~ 291704 (+)
G40716 NA non-coding upstream 2584 86590 ~ 86832 (+)
G40707 NA non-coding upstream 11751 77321 ~ 77665 (+)
G40660 NA non-coding upstream 14932 74224 ~ 74484 (+)
G40659 NA non-coding upstream 17072 72128 ~ 72344 (+)
G40635 NA non-coding upstream 61750 27456 ~ 27666 (+)
G40722 NA non-coding downstream 2452 93560 ~ 93777 (+)
G40766 NA non-coding downstream 84119 175227 ~ 175447 (+)
G40775 NA non-coding downstream 138083 229191 ~ 233279 (+)
G40796 NA non-coding downstream 207303 298411 ~ 298726 (+)
G40797 NA non-coding downstream 207852 298960 ~ 299192 (+)
G40772 NA other downstream 384357 475465 ~ 479194 (+)
G40767 NA other downstream 389524 360009 ~ 484185 (+)
G40768 NA other downstream 397767 488407 ~ 493026 (+)
G41170 NA other downstream 1600957 1692065 ~ 1695821 (+)
G41424 NA other downstream 2554554 2645662 ~ 2660570 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location