G40716


Basic Information

Item Value
gene id G40716
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 86590 ~ 86832 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU46206
TAAGCACACAGATAAAATAACGAAGGAGTGGCTTCACAACAACTCTGTGACTGTTCTTGAATGGCCCAGCCAGAGCCCTGACTTAAACCCAATTGAGCATCTCTGGAGAGACCTAAAAATGGCTGCCCACCAACGTTTACCATCCAACCTGACAGAACTGGAGAGGATCTGCAAGGAGGAATGGCAGAGGATCCCCAAATTCAGGTGTGAAAAACTTGTTGCATCTTTCCCCAAAAGACTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46206 True 243 lncRNA 0.47 1 86590 86832

Neighbor

gene id symbol gene type direction distance location
CI01000006_00075230_00076159 OR115-7, OR115-9 coding upstream 10192 74539 ~ 76398 (+)
CI01000006_00060296_00061324 OR115-7, OR115-9 coding upstream 25165 60232 ~ 61425 (+)
CI01000006_00039405_00040475 OR115-7, OR115-9 coding upstream 45004 39333 ~ 41586 (+)
CI01000006_00004261_00005202 NA coding upstream 81142 2802 ~ 5448 (+)
CI01000006_00089909_00090850 NA coding downstream 2584 89416 ~ 91108 (+)
CI01000006_00110930_00139640 OR115-9 coding downstream 23542 110374 ~ 139894 (+)
CI01000006_00140414_00141739 NA coding downstream 53191 140023 ~ 142211 (+)
CI01000006_00143205_00144149 NA coding downstream 55933 142765 ~ 144542 (+)
CI01000006_00158417_00184263 OR115-7, OR115-2, OR115-9 coding downstream 71525 158357 ~ 184336 (+)
G40707 NA non-coding upstream 8925 77321 ~ 77665 (+)
G40660 NA non-coding upstream 12106 74224 ~ 74484 (+)
G40659 NA non-coding upstream 14246 72128 ~ 72344 (+)
G40635 NA non-coding upstream 58924 27456 ~ 27666 (+)
G40629 NA non-coding upstream 67007 19354 ~ 19583 (+)
G40722 NA non-coding downstream 6728 93560 ~ 93777 (+)
G40766 NA non-coding downstream 88395 175227 ~ 175447 (+)
G40775 NA non-coding downstream 142359 229191 ~ 233279 (+)
G40796 NA non-coding downstream 211579 298411 ~ 298726 (+)
G40797 NA non-coding downstream 212128 298960 ~ 299192 (+)
G40772 NA other downstream 388633 475465 ~ 479194 (+)
G40767 NA other downstream 393800 360009 ~ 484185 (+)
G40768 NA other downstream 402043 488407 ~ 493026 (+)
G41170 NA other downstream 1605233 1692065 ~ 1695821 (+)
G41424 NA other downstream 2558830 2645662 ~ 2660570 (+)

Expression


Co-expression Network