CI01000006_09197554_09198425


Basic Information

Item Value
gene id CI01000006_09197554_09198425
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 9197275 ~ 9198425 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_09197554_09198425.mRNA
GATGTGGCAGTAACTGTCCTCAGTCTGACTCAGACCCCGTTGCTGAGACAGGCAAGCAGGTGTGCAGGGCGCAGATGGGGAACAGCTCTAGCCCACGAGGTCCGTTCGTTCAGCCACATGAAGTTTACAAACCTGCCAGGCAGGAGATTTGCATGTAGAGTTCCAGGTACCTATTTGAATGAAGCTTTATCTCCAGTCACACCAGAGATTTCACACAGCCTCTGGCAGTGTGAAGAACCATCAGCAGGGCCAACGGAACTGTGTATCCGGATCCTCGACAGGGCGGGGACACAAGAAGACAAACACTGCTAAGCCTTGTTTGCTGACTCTTCTCATTTTACACTGTACCAGGACTGATTTCTTAACACATTTACAGTATGTGCAGCCCTCCCCTTTCTCTTCATATCACAACTAGATTTAAAAGTCCACGTTTATGAATTATTGATCAAGCACTTTACAACTCATTTCAAACAATACCATTTATTTAGCACTATTTTTGTGACAAGAATTTCTATAAATAACACAACAAAAGAAAAAAACTTCAATCTAAACATTACCATACAATCTTACTACTTTTTATACTAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_09197554_09198425.mRNA True 591 mRNA 0.42 3 9197275 9198425

Neighbor

gene id symbol gene type direction distance location
CI01000006_09161066_09181709 TSC1B, TSC1 coding downstream 15566 9160927 ~ 9181709 (-)
CI01000006_09019351_09023876 STOM coding downstream 173399 9019276 ~ 9023876 (-)
CI01000006_08866054_08871468 NA coding downstream 325807 8866019 ~ 8871468 (-)
CI01000006_08831292_08836066 NA coding downstream 360657 8830955 ~ 8836618 (-)
CI01000006_08797043_08827629 RXRA, RXRAA coding downstream 369589 8796836 ~ 8827686 (-)
CI01000006_09205576_09277358 BCR coding upstream 7151 9205576 ~ 9278154 (-)
CI01000006_09282220_09315540 ATP2A2.S, ATP2A2, ATP2A2A, ATP2A2B coding upstream 82430 9280855 ~ 9316496 (-)
CI01000006_09326410_09330229 ARPC3, ARPC3.L coding upstream 127805 9326230 ~ 9330262 (-)
CI01000006_09330816_09334587 ATPBB, GPN3 coding upstream 132191 9330616 ~ 9334765 (-)
CI01000006_09338560_09342684 VPS29 coding upstream 139840 9338265 ~ 9343783 (-)
G46428 NA non-coding downstream 39344 9157698 ~ 9157931 (-)
G46420 NA non-coding downstream 51790 9145256 ~ 9145485 (-)
G46419 NA non-coding downstream 52518 9144452 ~ 9144757 (-)
G46410 NA non-coding downstream 63514 9133309 ~ 9133761 (-)
G46396 NA non-coding downstream 93415 9103550 ~ 9103860 (-)
G46439 NA non-coding upstream 151634 9350059 ~ 9350304 (-)
G46445 NA non-coding upstream 177234 9375659 ~ 9375862 (-)
G46444 NA non-coding upstream 182737 9381162 ~ 9413493 (-)
G46455 NA non-coding upstream 217595 9416020 ~ 9416291 (-)
G46465 NA non-coding upstream 230866 9429291 ~ 9429577 (-)
CI01000006_07500281_07507754 NA other downstream 1686319 7500246 ~ 7507976 (-)
CI01000006_06974359_06976736 NA other downstream 2220403 6973224 ~ 6976872 (-)
CI01000006_04560607_04560993 NA other downstream 4635207 4559509 ~ 4562068 (-)
G43549 NA other downstream 4841847 4352510 ~ 4355428 (-)
G43102 NA other downstream 6263291 2908451 ~ 2933984 (-)
CI01000006_10453630_10483241 NA other upstream 1284431 10453613 ~ 10484006 (-)
G47658 NA other upstream 1832486 11030911 ~ 11033127 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 2451938 11650363 ~ 11654424 (-)
CI01000006_12348300_12348961 GLRX other upstream 3135984 12347180 ~ 12349383 (-)
CI01000006_12569291_12581457 CELL, CEL.2, CEL.1 other upstream 3152334 12569205 ~ 12582487 (-)

Expression


Co-expression Network