CI01000006_08866054_08871468


Basic Information

Item Value
gene id CI01000006_08866054_08871468
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 8866019 ~ 8871468 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_08866054_08871468.mRNA
GGTTCCTGAAGCCCCAGTGCTCGATACCACCGCCACCTCAGAGAGGACGAGCAGAAGCATGTACGTGTTTCAGCGGAATGTGTGCTCTTCATCAGCGCAGACTTTCTACAGAGCCCATAATAGAGCTTGTGGAGAACGAGTCTTTAAAACCCTGCGTGGTGTTCAGCAGTCTGTTCGCGGTGAAACTGTTGCTGTGGAAACCCTGTGGTCTGAGTCTGATTGCCAGCGCTGAACTCACATATGGTCCATGTTTGGAGAGCCCCAATGACAGGACCACTTCTGTAGTGGGCAGAGGGAGACGATCGCTGGCTCAGTCTTTTGTTGTTTCATTAGGGTTGGCTCAGTGGAACGTCGCCAGCAGCCTACAGAGAGACAAAAAGAAAATGTGGTCAGGCTTCCCGAGACCAAAGCATGTGTTTGTAGACCTTGTGGTCGCACGGGAAGGGGAAGGGGCACTCTCGGGTCAAAAGGACAACAAGCACTGTAGCCTAAAAAGCTTAGAGCTTAGACTATATGGAATGGCCAGATTTTTTACAGTGACCATCTCTGAAGAGTGGAAGCGGAGCTCTGCACAAATATCCTTACTCCTGCTGTCATACATTGAGCAAATTAAGAAATATGGCTCTTATTAGAATGTTGTCATTCTTAAAATACCGGTGCTAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_08866054_08871468.mRNA True 667 mRNA 0.48 6 8866019 8871468

Neighbor

gene id symbol gene type direction distance location
CI01000006_08831292_08836066 NA coding downstream 29401 8830955 ~ 8836618 (-)
CI01000006_08797043_08827629 RXRA, RXRAA coding downstream 38333 8796836 ~ 8827686 (-)
CI01000006_08780644_08787820 NA coding downstream 78199 8780117 ~ 8787820 (-)
CI01000006_08749304_08751622 BRD3A coding downstream 112336 8748737 ~ 8753683 (-)
CI01000006_08736720_08740065 NA coding downstream 125954 8736660 ~ 8740065 (-)
CI01000006_09019351_09023876 STOM coding upstream 147808 9019276 ~ 9023876 (-)
CI01000006_09161066_09181709 TSC1B, TSC1 coding upstream 289459 9160927 ~ 9181709 (-)
CI01000006_09197554_09198425 NA coding upstream 325807 9197275 ~ 9198425 (-)
CI01000006_09205576_09277358 BCR coding upstream 334108 9205576 ~ 9278154 (-)
CI01000006_09282220_09315540 ATP2A2.S, ATP2A2, ATP2A2A, ATP2A2B coding upstream 409387 9280855 ~ 9316496 (-)
G46106 NA non-coding downstream 30638 8408962 ~ 8835381 (-)
G46089 NA non-coding downstream 367217 8481249 ~ 8498802 (-)
G46018 NA non-coding downstream 589690 8198232 ~ 8276329 (-)
G45986 NA non-coding downstream 785763 8080018 ~ 8080256 (-)
G45985 NA non-coding downstream 786323 8079468 ~ 8079696 (-)
G46199 NA non-coding upstream 105203 8976671 ~ 8976871 (-)
G46102 NA non-coding upstream 127625 8999093 ~ 9008209 (-)
G46076 NA non-coding upstream 142663 9014131 ~ 9016971 (-)
G46208 NA non-coding upstream 152671 9024139 ~ 9026251 (-)
G46257 NA non-coding upstream 224991 9096459 ~ 9096705 (-)
CI01000006_07500281_07507754 NA other downstream 1355063 7500246 ~ 7507976 (-)
CI01000006_06974359_06976736 NA other downstream 1889147 6973224 ~ 6976872 (-)
CI01000006_04560607_04560993 NA other downstream 4303951 4559509 ~ 4562068 (-)
G43549 NA other downstream 4510591 4352510 ~ 4355428 (-)
G43102 NA other downstream 5932035 2908451 ~ 2933984 (-)
CI01000006_10453630_10483241 NA other upstream 1611388 10453613 ~ 10484006 (-)
G47658 NA other upstream 2159443 11030911 ~ 11033127 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 2778895 11650363 ~ 11654424 (-)
CI01000006_12348300_12348961 GLRX other upstream 3462941 12347180 ~ 12349383 (-)
CI01000006_12569291_12581457 CELL, CEL.2, CEL.1 other upstream 3479291 12569205 ~ 12582487 (-)

Expression


Co-expression Network