G137719


Basic Information

Item Value
gene id G137719
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 418761 ~ 420399 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU186330
ATTTATGGGGTTCTTTGGTTTTGGAAGCTTTTTGCTTCGTggcagtttgtgtttatttgtttattgatttattttaaagcattataaGCATTTCATATTCGATAATATTTAATAGTATTCCCTGCATTAACCCGAGCACTCGAAAGATACTCcgcgtttctctctcttttctcgtCTGCATCGTCCTGAAGTCCCGTAGTGCTGATCTGAGCCGGGCGACTCGGTTCATGCAGAGTTTAATTTGGGATGGAATACTAATTGTAATTTGTTGGTTGTTGCAGGACGTGTTTGTGTTGTGAGAGATGCAGCTTGTCTAATCCTGCCTGGGTTTGGTGATGATGTATCAGTGGAAGAgtggataaatggattagtgtctcttttccctctctctctctctctctttttccactctccttctcctccttccaTCTCATTAAGATGGATTTTGTTTTATCCAATACGGCGTCGTCCTCCAGCTGAATGTAGAACTCCCCTCTGAGGAGCAGCTGCAGCACCGAGGGGTGCTCTCCACCATCGTCCAAACTTTTCCTCCCCATCtcttagtgctgggcggcaggacgGAGCGTGAGACTCCACAGAACTGAACTACAGTGTggtagcttgttatgctaagtggctagcgttagctagcgagCTCTGCTACTGTGCTTTTTTGGTGTCGCTGTTCTACACCCTGGTATACCGTATAAAccacatcccacacattttccaGGAGAAAACAGAACTGATGCTCAAGAATGACCCGTGACCATCTTTTAGTAAACAATCTTAAATGCTTAAgctaatttaactaactaagcTTAGTTAgcgttactatcctagccctgtacagctcgtaTCTTTTAGCCGGAGATACAAGGTTCACTCACTGCCCCTGGAGGACATGAGTtagaggaggaggtggaggagtggTGATGGAGTAGAGCGGATACTCAGAAGTGTGGAAGTTTGGCCGGATGCCTGGATGCTGGGTGAGGAGGAGAGTAgtgggagatggagagatgtagGGGTCACAGGTCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186330 True 1043 lncRNA 0.46 2 418761 420399

Neighbor

gene id symbol gene type direction distance location
cenpl cenpl coding downstream 242095 173241 ~ 176666 (-)
eif2b3 eif2b3,ei2bg,LOC107720854,LOC107700990,LOC107722074,LOC107599900 coding downstream 272556 127085 ~ 146205 (-)
LOC103021456 ptch2,LOC107557169,LOC107700991,LOC107720855,LOC107599897,LOC107722076 coding downstream 295089 95083 ~ 123672 (-)
LOC111194215 NA coding downstream 329231 88370 ~ 89530 (-)
pappa2 NA coding upstream 297624 718023 ~ 750580 (-)
tnn NA coding upstream 571494 991893 ~ 1026466 (-)
trove2 trove2 coding upstream 669838 1090237 ~ 1102807 (-)
shh shh,LOC108411758 coding upstream 924665 1345064 ~ 1360413 (-)
lmbr1 lmbr1,LOC107742132,LOC106578611 coding upstream 1035054 1455453 ~ 1487674 (-)
G137710 NA non-coding downstream 32404 281116 ~ 386357 (-)
G137659 NA non-coding downstream 224763 193354 ~ 193998 (-)
G137648 klhl20,LOC102300935 non-coding downstream 254816 161696 ~ 163945 (-)
G137646 NA non-coding downstream 284465 133158 ~ 134296 (-)
G137611 NA non-coding downstream 340398 75676 ~ 78363 (-)
G137721 NA non-coding upstream 5836 426235 ~ 426528 (-)
G138136 NA non-coding upstream 65298 485697 ~ 506438 (-)
G138160 rfwd2,LOC107658354,LOC107726924 non-coding upstream 355220 775619 ~ 780533 (-)
G138166 NA non-coding upstream 437549 857948 ~ 864771 (-)
G138195 NA non-coding upstream 617468 1037867 ~ 1039082 (-)
LOC111194217 pappa2,LOC107722077,LOC107678935,LOC107726923,LOC107658303,LOC107558342 other upstream 275504 695903 ~ 717323 (-)
G138199 plk3,LOC107563563,LOC107722069,LOC107658359,LOC107726922,LOC107557223 other upstream 630133 1050532 ~ 1101493 (-)
LOC103042176 zgc:55943,c7h1orf21,LOC103042176,LOC108430752,LOC107709356,LOC107671715,LOC107559369,LOC107593773,LOC107727521 other upstream 2057296 2477695 ~ 2486894 (-)
LOC103045355 LOC108430731 other upstream 2630001 3050400 ~ 3062759 (-)
LOC103025790 NA other upstream 2675202 3095601 ~ 3114686 (-)

Expression


Co-expression Network