G139712


Basic Information

Item Value
gene id G139712
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 7202932 ~ 7203256 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU189132
gtggacgtagtttagacgttgccgtccactttagacgcaaaagtggttttggtacctcccaaaattttcggaatagacggcgactaatatggacgtaatttagtggatatttagacgcagtacggacgtattttagtggatatttggacggcacgtacaggtggacgtcgacgtccataaaaatatttttctggcgtCCATCACTTTTCCACACTTTCCAAGATGCCAGCCAAGAGGAAGGATTTTCCGAGGAGGCAGTTCCAGCTCCCGAGGAACCAGCTCGAGCCCCTGAGGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189132 True 297 lncRNA 0.48 2 7202932 7203256

Neighbor

gene id symbol gene type direction distance location
psmb5 psmb5,LOC108438927,LOC107668975,LOC107558100,LOC107706341,LOC107694665 coding upstream 18529 7164784 ~ 7184403 (+)
LOC103025339 psmb11,LOC102219341 coding upstream 40670 7160020 ~ 7162262 (+)
LOC103043453 NA coding upstream 184402 7005464 ~ 7018530 (+)
LOC103024705 NA coding upstream 198683 6995553 ~ 7004249 (+)
LOC111194294 NA coding upstream 213561 6975971 ~ 6989371 (+)
LOC103025648 NA coding downstream 27280 7230536 ~ 7250133 (+)
LOC103025951 cdh24,LOC108442582,LOC107591395 coding downstream 131748 7335004 ~ 7654533 (+)
LOC107197863 NA coding downstream 484851 7688107 ~ 7693776 (+)
LOC111194231 NA coding downstream 495105 7698361 ~ 7706542 (+)
LOC103026260 NA coding downstream 506060 7709316 ~ 7717249 (+)
G139710 NA non-coding upstream 10528 7191908 ~ 7192404 (+)
G139401 NA non-coding upstream 115250 7086977 ~ 7087682 (+)
G139395 NA non-coding upstream 153203 7046418 ~ 7049729 (+)
LOC111194296 NA non-coding upstream 163552 7029282 ~ 7039380 (+)
G139375 NA non-coding upstream 269459 6931518 ~ 6933473 (+)
G139737 NA non-coding downstream 272714 7475970 ~ 7476346 (+)
G139738 NA non-coding downstream 303796 7507052 ~ 7507357 (+)
G139747 NA non-coding downstream 336403 7539659 ~ 7539943 (+)
G139750 NA non-coding downstream 365111 7568367 ~ 7568570 (+)
G139720 NA non-coding downstream 424984 7628240 ~ 7982297 (+)
LOC103044361 nedd8,LOC103358415,LOC107588156,LOC107562413,LOC104953875,LOC108438931,LOC106608856,LOC106577802 other upstream 156634 7041560 ~ 7046298 (+)
dhx9 dhx9 other upstream 460863 6718238 ~ 6742069 (+)
G139282 NA other upstream 935545 6266816 ~ 6267387 (+)
LOC103028159 NA other upstream 960361 6235434 ~ 6242571 (+)
G139268 NA other upstream 1038768 6159720 ~ 6164164 (+)
LOC103030954 NA other downstream 1958077 9161333 ~ 9162523 (+)
LOC103030224 NA other downstream 2017018 9220274 ~ 9223981 (+)
G140062 NA other downstream 2336519 9539775 ~ 9540810 (+)
G140103 NA other downstream 2540442 9743698 ~ 9745355 (+)
G140258 NA other downstream 2786662 9989918 ~ 9990296 (+)

Expression


Co-expression Network