G139738


Basic Information

Item Value
gene id G139738
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 7507052 ~ 7507357 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU189166
aaataacaagaaaacaaggaacaagtaacatgaaacaaagatacacaaataaccaataaccaaaacaaataaggggttaacgataacaaaacagggagactaaagaaacaaacgagtaactgaaacaagactaaaataactaaacagaacaaggataaccaaataataaaataaaccaaatactaacaaacaaggaactaaaacaagacaggattaactaaactgggcaagggagaaaagaagcaaaataaacaaggagctaGAAGTAAAACGagataaacactgaactaggAAACGGGatatgaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189166 True 306 lncRNA 0.31 1 7507052 7507357

Neighbor

gene id symbol gene type direction distance location
LOC103025648 NA coding upstream 256919 7230536 ~ 7250133 (+)
psmb5 psmb5,LOC108438927,LOC107668975,LOC107558100,LOC107706341,LOC107694665 coding upstream 322649 7164784 ~ 7184403 (+)
LOC103025339 psmb11,LOC102219341 coding upstream 344790 7160020 ~ 7162262 (+)
LOC103043453 NA coding upstream 488522 7005464 ~ 7018530 (+)
LOC103024705 NA coding upstream 502803 6995553 ~ 7004249 (+)
LOC107197863 NA coding downstream 180750 7688107 ~ 7693776 (+)
LOC111194231 NA coding downstream 191004 7698361 ~ 7706542 (+)
LOC103026260 NA coding downstream 201959 7709316 ~ 7717249 (+)
LOC103026570 NA coding downstream 214383 7721740 ~ 7729314 (+)
carmil3 carmil3,lrrc16b coding downstream 234366 7741723 ~ 7911771 (+)
G139737 NA non-coding upstream 30706 7475970 ~ 7476346 (+)
G139712 NA non-coding upstream 303796 7202932 ~ 7203256 (+)
G139710 NA non-coding upstream 314648 7191908 ~ 7192404 (+)
G139401 NA non-coding upstream 419370 7086977 ~ 7087682 (+)
G139395 NA non-coding upstream 457323 7046418 ~ 7049729 (+)
G139747 NA non-coding downstream 32302 7539659 ~ 7539943 (+)
G139750 NA non-coding downstream 61010 7568367 ~ 7568570 (+)
G139720 NA non-coding downstream 120883 7628240 ~ 7982297 (+)
G139781 NA non-coding downstream 513089 8020446 ~ 8020933 (+)
G139782 NA non-coding downstream 515026 8022383 ~ 8035973 (+)
LOC103044361 nedd8,LOC103358415,LOC107588156,LOC107562413,LOC104953875,LOC108438931,LOC106608856,LOC106577802 other upstream 460754 7041560 ~ 7046298 (+)
dhx9 dhx9 other upstream 764983 6718238 ~ 6742069 (+)
G139282 NA other upstream 1239665 6266816 ~ 6267387 (+)
LOC103028159 NA other upstream 1264481 6235434 ~ 6242571 (+)
G139268 NA other upstream 1342888 6159720 ~ 6164164 (+)
LOC103030954 NA other downstream 1653976 9161333 ~ 9162523 (+)
LOC103030224 NA other downstream 1712917 9220274 ~ 9223981 (+)
G140062 NA other downstream 2032418 9539775 ~ 9540810 (+)
G140103 NA other downstream 2236341 9743698 ~ 9745355 (+)
G140258 NA other downstream 2482561 9989918 ~ 9990296 (+)

Expression


Co-expression Network