G141217


Basic Information

Item Value
gene id G141217
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 13288126 ~ 13288373 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU191181
ccttcccctgaacaactatgttgaacaatctttatttttagatcatttgagagttgttttgatgagcccatgatgccactcttcagaggagattcaaatagtagaacaacttgcaattggccaccttaaataccttttctcatgactggatacacctggctatgaagttcaaagctcaatgaggttaccaaaccaattgtgtgcttcagtaagtcagtaaaaagtagttaggagtattcaaatcaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191181 True 248 lncRNA 0.37 1 13288126 13288373

Neighbor

gene id symbol gene type direction distance location
LOC103029125 yes1,LOC108437224,LOC107713975,LOC107584194,LOC107686048 coding downstream 465166 12740384 ~ 12822960 (-)
LOC103028809 colec12,LOC103028809,LOC108437226,LOC108267818,LOC107686068 coding downstream 584848 12618151 ~ 12703278 (-)
stam stam,LOC107664071 coding downstream 676019 12596820 ~ 12612107 (-)
LOC103028177 LOC108437218 coding downstream 698383 12583877 ~ 12589743 (-)
LOC103032996 NA coding downstream 1166850 12056835 ~ 12121276 (-)
LOC103030941 lpin2,lipin2,LOC108413408,LOC107686047,LOC107584234 coding upstream 159902 13448275 ~ 13509530 (-)
bag1 bag1,LOC107746903,LOC107664079 coding upstream 300143 13588516 ~ 13591700 (-)
LOC103031885 chmp5,LOC108440659,LOC107732555,LOC107664100,LOC107586329,LOC107558945,LOC107686086 coding upstream 305384 13593757 ~ 13599834 (-)
LOC103032206 oprk1,LOC108440658,LOC107664042,LOC107732559 coding upstream 338459 13626832 ~ 13635497 (-)
atp6v1h atp6v1h,LOC107664082,LOC107686042 coding upstream 400850 13689223 ~ 13794272 (-)
G141180 NA non-coding downstream 281128 13006127 ~ 13006998 (-)
G141179 NA non-coding downstream 297671 12984867 ~ 12990455 (-)
G141171 NA non-coding downstream 352047 12935871 ~ 12936079 (-)
G141164 NA non-coding downstream 387683 12900242 ~ 12900443 (-)
G141136 NA non-coding downstream 469992 12737394 ~ 12818134 (-)
G141218 NA non-coding upstream 26318 13314691 ~ 13315030 (-)
G141245 NA non-coding upstream 80248 13368621 ~ 13372297 (-)
G141247 NA non-coding upstream 151287 13439660 ~ 13480474 (-)
G141257 NA non-coding upstream 222166 13510539 ~ 13510781 (-)
G141258 NA non-coding upstream 222737 13511110 ~ 13511318 (-)
LOC103027860 cacnb2b,LOC108437228,LOC107664070,LOC107713974,LOC107751551,LOC107585874 other downstream 715979 12472804 ~ 12572147 (-)
G141020 NA other downstream 872971 12348559 ~ 12415155 (-)
G140975 NA other downstream 1113132 12173695 ~ 12174994 (-)
G140772 fam134b other downstream 1677597 11606235 ~ 11610529 (-)
G140472 slc4a2,LOC108413474,LOC107718031 other downstream 2773319 10511089 ~ 10514807 (-)
G141220 NA other upstream 27518 13315891 ~ 13316365 (-)
G141255 LOC108413406 other upstream 148258 13436631 ~ 13438896 (-)
LOC103040388 LOC108440660,LOC107686045,LOC107746915,LOC108268132,LOC107732591 other upstream 223779 13512152 ~ 13585394 (-)
tcea1 tcea1 other upstream 567184 13855557 ~ 13864078 (-)
G141383 NA other upstream 620811 13909184 ~ 13910602 (-)

Expression


Co-expression Network