LOC103033691 (LOC108431537,LOC108266640,LOC107600138,LOC107713778,LOC107687503,LOC107683489,LOC107734392)


Basic Information

Item Value
gene id LOC103033691
gene name LOC108431537,LOC108266640,LOC107600138,LOC107713778,LOC107687503,LOC107683489,LOC107734392
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 3336557 ~ 3353875 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU118760
gtagagcgaggtacagcaaggtagagtgaggtagatcaaggcagagcaaggtagagtgaggcagatcaAGGTAAAGCAAGGTACAATGAAgtagactgaggtagagtgGGGCAGAATGAGGTAGGGCAAagtaaaatgaggtagagtgagttagattgaggtagagtgagagagagatagagagagagagagagacgggttAGGATGGGAGACTTAGTGTGACAGGTCCAGGTGCACACATGCATTGTGtagtgtttaattattattaattaatattattttaattttaattcaacACCAAAGACTTTACGTTAGTGTTTCAAAAACATTACTAGGCTGTATCCGAACAAGTATACGCAAAGAATGCCCTGTATGACTCCATTTCCGTCCCATACTAGTTCACTATGTTGTGTGCTTTTTTGCACTGCTGCACTCTTGATGTGTGTTTAGCCATCGAAATGGTAAATACAGCACTTAAGCCAACATTATAGAGTTgccattttttgttctttttattattgtctTTCATTTTTTAGTAATGAAAGTGAATGTgcagcatatttaaaaaaaataatgaataaatattggGAGATGATTTGCTGGATGATCTCACATTTGgatatttataaagtatttcaccaaatattggaCGGACCCTGTATGATCCAAAAGACATCACCATCATTTTGTTTTAGAGATGTTCATTTTGTTCTGCttcctaaaaaaaacagatagctGTTCCATTGTGCAATGTCAAAGTGAAGCAATtctgagaaagaaaataaaaaaagcgtaataaatctgtgttatagtttGGACTGAGAAAAGCATATTGTGAGGACGTATGTGaatgcatacaaaaaaaaataaagaaaaacaaaaaaagtcaaatccagaaaaaaaaatatctaaaaaaggaaaatatggtgtgtatgttttttgttcatCAAGACAAAATGAATCGACACTGAATAAAGTGgactaaaaaaaagcatatatatttttattgtgtatatatgGAAATCAAGATACCAATATGTTGCATTGCTTTGTTGTATAAATCAAAAACTGTGCTTGTGGgttt
>XM_007238625.3
agagagaaaaaggacagATACAgcgcaagagagaaagagagagagagagagagagagagagagcccaaCCCACTTCTACAAAACCATTCAACTCCTGCATAGTGAGCAGTCCCAGACCTCTCGTGAGCACGCTGCTTCCCCAGGGCTCCTCCAGAAGCTGCCTGCCTTTCCCATACAAACTTCCCAAGGACCCAgagcgagagacacagacagagagagagagggagagaaccACTACAAGTCAAACAACTGGCAAAAGACCTATTCATCCTCTTCAGTCAGCACCTCTCTTCACAACAGCTCTCCTTCTAACAACAaggattatctttttttttctttttcttaattttttttgtcttactctatccttttttgttttttattttttgccctTCTCAAAGCTTTGTCAGACTGAACGCCTCCACAGGTAGAAGACCTGGCAGAGACTGTCCTGTGACTGGAAGGAGAGCATTTTCTCAACTCTGTGAAGGAACTTTTCAGTActtttgtgtcttttttctttcctaattcagtaagtttttaAATTTTCTACGCTAGTTAGTCAACTTTCCCACTCTGTCTGCATCACCCCTCCGAAGTCCATCACTTAATTTTTGAGGATGTCGCTCCTGCCAGCCCTCAGTGGGGCACTGCTGCTCCTTGCTCACTGCTGCTCCATCAGTGCCATGGCTACCTCGGGCTCCCTGCCATCAGACTGCCCGTCCTGCGCCCTGGCCAGGCTACGGCGGGGTGGCCCGGACGCACTGGTGTCAGATGAAGCGGAGGCACAGCAGGACGTGGTGGAGGCGGTGAAGAGGCACATCCTCAGCATGCTGCACCTGCAGGCTCGGCCCAACATCACTCATCCGGTGCCCCGCGCTGCCCTGCTTAACGCCATCCGCAAGGTGCACGTAGGCCGCGTGGCGCAGGACGGCAGTGTCATGATCGACGATGAACCTCACAGTCGGCAGGACTCAGAGAGCACCGAGCAGACCGAAATCATCACCTTTGCCGAAGCCGGTGAAGCTTCAGGTCTGATCAACTTCCTCATCTCCAAGGAGGGTGATGAGCTGTCTCTGGTGGAGCAGGCCAACGTGTGGCTCTTCCTCAGACTTCCGAAAGGCAACCGCACTCGGACCAACGTCACCATCCGACTCTTGCTTCAGAGGCCAGGTCTTGAAGAGAAGCTGCTGGCTGAAAAAAACGTGGACACCCGGCGCAGTGGCTGGCACACCTTCCCCGTGGCGGCCAGCGTTCAGTCCCTGCTTGAGCGAGGTGGCAGCAGTGCCCTGAGGCTGCGAGTCTCCTGCCCACTGTGCGCAGAGGCTCGGGCTACACCCATCCTGGTGAGCCCGGGAGGCGGGGAGAGGGAACAGTCACACCGGCCCTTCCTGATGGCGGTGGTGCGACAGGCTGATGATCAAAACCCAAGGCGGCGCCGGAAGCGGGGCCTGGAATGCGACGGCAAGGTGCGAGTGTGCTGCAAGAGGCAGTTCTACGTCAACTTCAAGGATATCGGCTGGAACGACTGGATCATCGCGCCATCTGGCTACCACGCCAACTACTGCGAAGGCGACTGCCCGAGTCACATCGCCAGCATCACTGGTACCTCGCTGTCCTTCCACTCTACCGTCATCAACCACTACCGCATGCGCGGCTACAGCCCCTTCACCAACATTAAGTCGTGTTGTGTACCCACACGCCTCCGCGCCATGTCCATGCTCTACTACAACGAGGAGCAAAAGATCGTCAAGAAGGACATCCAGAACATGATTGTGGAAGAGTGCGGCTGCTCGTAAAGCTGGGCGGGAAACAGACAAGAGACAAACGGACaagagcagacagacagagagagagagagagagagagatagagagagggagcagcCGAGCTGGATTTGTGGAAACAGAGGGAGGGGCGAGGACTTGTGCCCTAACAGCAAGGACCTGGACAAACAAGAATATAGAGAGGCGAGGTGGAGGGAGGAGGGACAGGGTGCAGCCATCCCGCTAACTCCATCTCTCTATCGCACACACAGCTGCGAGACACTCTCTCAAGCAAAGGCAGGCCTCTCTCCCTTGACGCGACGGCTGTTTACCGTCTGAAAATCCAGTGGGTGTCTGTTCCTCAGAATAGTTTCAGTGGCactttcagataaaaaaaaaagatatataatatatttttgttacaaaGCCGAGGGACTGGGGGCAAGATGATATTTATGCGAGCGAGAATGCAGAGCAGTCCCTCCGAACATGCCCTGTGTAAAGAGAGACCACGATGATGAGGTGcctgaaaaaaaatctcaaactATGCAACTTGTCAAGTATTAAGAGTTATTTTTCATTGACGTGTCGTTCTGTTCCTTTGCTATTTACTTTTacaaaccttaaaaaaagaggaagttgacttttttatacttttttttgaaAGTATGTTTGATGTCGtcagtgtgtctgtttgtgtgtgtgtgtgtttgtatatgtgtacgtataagtgtgtgtataaatatatatgtatatacatatatatataaaagggtgtttgtgtatgtatgcgTGTTGTTGAGAGATACTTGAAAGAAGTTTGACCGGCTGCTGGAACCAAacgtttctgtttattattattattgttattattattattctaattattatgacttgtattgttaataataatattattataattattattttgttcatgtttttcctctttctttgttatcttaaaaaaaacgaGACGTTACGAACGTTTACAGTTTGCACTATGCCAACATTTCAGCCTAGCCACATATACAAACGGTATTTAGCGAAAGACGAGAAGCACCTTCGTAGCTTAAGTTGGACATAGTGAAGTGAagggaagtgagagagagagagagagaagagagagagagagagagagacgggttAGGATGGGAGACTTAGTGTGACAGGTCCAGGTGCACACATGCATTGTGtagtgtttaattattattaattaatattattttaattttaattcaacACCAAAGACTTTACGTTAGTGTTTCAAAAACATTACTAGGCTGTATCCGAACAAGTATACGCAAAGAATGCCCTGTATGACTCCATTTCCGTCCCATACTAGTTCACTATGTTGTGTGCTTTTTTGCACTGCTGCACTCTTGATGTGTGTTTAGCCATCGAAATGGTAAATACAGCACTTAAGCCAACATTATAGAGTTgccattttttgttctttttattattgtctTTCATTTTTTAGTAATGAAAGTGAATGTgcagcatatttaaaaaaaataatgaataaatattggGAGATGATTTGCTGGATGATCTCACATTTGgatatttataaagtatttcaccaaatattggaCGGACCCTGTATGATCCAAAAGACATCACCATCATTTTGTTTTAGAGATGTTCATTTTGTTCTGCttcctaaaaaaaacagatagctGTTCCATTGTGCAATGTCAAAGTGAAGCAATtctgagaaagaaaataaaaaaagcgtaataaatctgtgttatagtttGGACTGAGAAAAGCATATTGTGAGGACGTATGTGaatgcatacaaaaaaaaataaagaaaaacaaaaaaa

Function

NR:

description
PREDICTED: inhibin beta A chain-like

GO:

id name namespace
GO:0031101 fin regeneration biological_process
GO:0005576 extracellular region cellular_component
GO:0008083 growth factor activity molecular_function

KEGG:

id description
K04667 INHBA; inhibin beta A chain

RNA

RNA id representative length rna type GC content exon number start site end site
TU118760 False 1084 lncRNA 0.34 2 3336557 3343101
XM_007238625.3 True 3598 mRNA 0.46 2 3336756 3353875

Neighbor

gene id symbol gene type direction distance location
fzd8 fzd8,fzd8a,LOC107739125,LOC107717597 coding downstream 459445 2874234 ~ 2877112 (-)
klf6 klf6,LOC101473487,LOC105019438,LOC102789845 coding downstream 860145 2468182 ~ 2476412 (-)
adarb2 adarb2,LOC107713870,LOC107734387 coding downstream 1364914 1639731 ~ 1971643 (-)
idi1 idi1 coding downstream 1780790 1550735 ~ 1555767 (-)
LOC103026733 slc35g2,slc35g2b,LOC103026733,LOC107588046,LOC107687509,LOC107683493,LOC107714021 coding downstream 1890474 1438926 ~ 1446083 (-)
eci2 eci2,zgc:92030,LOC107713764 coding upstream 56951 3410826 ~ 3425018 (-)
c10h18orf63 NA coding upstream 183187 3537062 ~ 3571119 (-)
nrn1 nrn1,nrn1a,LOC107713755,LOC107734388 coding upstream 646495 4000370 ~ 4009739 (-)
f13a1 NA coding upstream 669136 4023011 ~ 4047235 (-)
LOC103047438 ralyl,LOC108431401 coding upstream 846397 4200272 ~ 4474095 (-)
G88238 NA non-coding downstream 44086 3260055 ~ 3292471 (-)
G88218 NA non-coding downstream 184551 3149629 ~ 3152006 (-)
LOC111193313 NA non-coding downstream 186457 2997118 ~ 3150100 (-)
LOC111193312 NA non-coding downstream 466990 2845019 ~ 2869567 (-)
G88106 NA non-coding downstream 836793 2494541 ~ 2499764 (-)
G88351 fam69c non-coding upstream 149727 3503602 ~ 3584174 (-)
G88385 NA non-coding upstream 546620 3900495 ~ 3901629 (-)
LOC111193290 NA non-coding upstream 635735 3989610 ~ 3991142 (-)
LOC111193315 NA non-coding upstream 696475 4050350 ~ 4080088 (-)
G88406 NA non-coding upstream 705457 4059332 ~ 4059643 (-)
G88044 pfkp,LOC101472402,LOC102201923,LOC100702375,LOC102790125 other downstream 1049318 2275608 ~ 2287239 (-)
G87802 zic1 other downstream 2371480 960006 ~ 965077 (-)
lyrm4 lyrm4 other upstream 252555 3606430 ~ 3691548 (-)
G88458 NA other upstream 1211975 4565850 ~ 4566204 (-)
G88465 NA other upstream 1241183 4595058 ~ 4595325 (-)
vstm2a vstm2a other upstream 3322400 6676275 ~ 6732664 (-)
LOC103026131 LOC108431006 other upstream 3749696 7103571 ~ 7215239 (-)

Expression


Co-expression Network