G41200


Basic Information

Item Value
gene id G41200
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035901.1
NCBI id CM008304.1
chromosome length 40584741
location 9116445 ~ 9118432 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU55470
aaacTGAATAGAGCTGCAAACTAAAAGAACGTAAAACTAAAAGAGAGTTTTTGCTAAAATTAGATTTATCTGATCTAAAAGAAGACTGCAAACATTAAAAGCTACAGGATTTCTAAGTCTTCAGCACTTTATGTAgacttaataaaacacagaactaaAACTGAGTAGAGCTGGCAAACTAAAAGAACGTAAAACTAAAAGGAAGTTGTTGCTAAAAATTTGATTTATCTGATCTGAAAGGAGACTGCAAACACTAAAAGCTACAGGATTTCTAAGTCTTCAGCTCTTCATGTAgactaaataaaacacagaattaaaacTGAATAGAGCTGGCAAACTAAAAGAAAGTAAAACTAAAAGAGAGTTTTTGCTAAAATTAGATTTATCTGATCTAAAATGAgactgcaaaaactaaaagctACAGGATTTCTAAGTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55470 True 438 lncRNA 0.30 3 9116445 9118432

Neighbor

gene id symbol gene type direction distance location
ncbp2 ncbp2 coding downstream 174324 8937305 ~ 8942121 (-)
LOC103026545 NA coding downstream 292707 8811683 ~ 8823738 (-)
LOC103026828 NA coding downstream 317493 8791997 ~ 8798952 (-)
LOC103027111 LOC108439438 coding downstream 326554 8779031 ~ 8789891 (-)
LOC103027404 NA coding downstream 342478 8767130 ~ 8773967 (-)
hyls1 NA coding upstream 861149 9979581 ~ 9993252 (-)
LOC103037233 ptp4a1,LOC107563655,LOC107597142 coding upstream 904617 10023049 ~ 10029625 (-)
LOC103036321 LOC108438678,LOC108270736,LOC107597144 coding upstream 916897 10035329 ~ 10069803 (-)
ly75 NA coding upstream 960422 10078854 ~ 10126523 (-)
LOC103036004 NA coding upstream 1011532 10129964 ~ 10174716 (-)
G41176 NA non-coding downstream 35453 9023584 ~ 9080992 (-)
G41179 NA non-coding downstream 57061 9038194 ~ 9059384 (-)
G41154 NA non-coding downstream 181068 8928462 ~ 8935377 (-)
G41148 NA non-coding downstream 194630 8921568 ~ 8921815 (-)
G41085 NA non-coding downstream 313762 8790922 ~ 8802683 (-)
G41236 NA non-coding upstream 184192 9302624 ~ 9302948 (-)
G41243 NA non-coding upstream 236085 9354517 ~ 9354753 (-)
G41329 NA non-coding upstream 645478 9763910 ~ 9764373 (-)
G41380 NA non-coding upstream 686562 9804994 ~ 9843913 (-)
G41383 NA non-coding upstream 702633 9821065 ~ 9824194 (-)
G41071 col6a2 other downstream 376163 8697913 ~ 8740282 (-)
G41052 col6a1,LOC102785632 other downstream 492004 8575851 ~ 8624441 (-)
fam43a fam43a,LOC106573864 other downstream 689350 8355999 ~ 8427095 (-)
G40959 NA other downstream 881749 8234107 ~ 8234696 (-)
LOC103030262 diaph3,LOC108428456,LOC108271281,LOC107741707 other downstream 1029259 7514543 ~ 8087186 (-)
G41514 fth1,LOC103039853,LOC100692258,LOC104919244,LOC103365615,LOC105892494,LOC101464185,LOC100304657,LOC100528068 other upstream 827773 9946205 ~ 9953351 (-)
G41522 NA other upstream 844183 9962615 ~ 9963962 (-)
G41543 NA other upstream 1045028 10163460 ~ 10225826 (-)
G41551 NA other upstream 1151904 10270336 ~ 10270820 (-)
LOC103036175 tpm4,tpm4a,LOC103036175,LOC108424981,LOC107561904,LOC107665514,LOC107715082,LOC107757474,LOC107653617 other upstream 1866752 10985184 ~ 11016085 (-)

Expression


Co-expression Network