G85504


Basic Information

Item Value
gene id G85504
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 33154502 ~ 33154747 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU115142
tgtcaccggggaaaggacgcacaccaaatgacaaaagatctttttcgggtattttattctgattttatttaaaacaataaaaataaaaatgaatacactgtaaaaccctaacttagaacacagtacagtatttggtagtggcactaattacagaaaacagataaataactttaataccacattaataccaccaacagagctcttttaataTTTGCCTCCAAGCTCACCTCGATCCACTCAGCCCta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115142 True 246 lncRNA 0.35 1 33154502 33154747

Neighbor

gene id symbol gene type direction distance location
clip4 clip4,LOC107676111 coding downstream 123113 32938106 ~ 33031389 (-)
LOC111193155 NA coding downstream 670669 32442573 ~ 32483833 (-)
LOC103036987 LOC103036987 coding downstream 753333 32394659 ~ 32401169 (-)
akirin1 akirin1,LOC107700743,LOC107730931,LOC107704951 coding downstream 763072 32375329 ~ 32391430 (-)
rhbdl2 rhbdl2,LOC108280367,LOC106605138 coding downstream 782015 32356090 ~ 32372487 (-)
LOC103041514 lrfn2,LOC107703608,LOC107754970 coding upstream 47055 33201802 ~ 33475689 (-)
supt7l supt7l,LOC107726086,LOC107656753,LOC107553729,LOC107737450,LOC107697525 coding upstream 665318 33820065 ~ 33829743 (-)
LOC103040637 si:dkey-16j16.4,LOC108423460,LOC107697539,LOC107566112,LOC107553735,LOC107656750,LOC108270219 coding upstream 702552 33857299 ~ 33910007 (-)
zdhhc14 zdhhc14,LOC106574720,LOC105897223 coding upstream 1644392 34799139 ~ 34867074 (-)
LOC103041141 LOC108423399 coding upstream 1715398 34870145 ~ 35195330 (-)
G85503 NA non-coding downstream 40863 33113239 ~ 33113639 (-)
LOC111193248 NA non-coding downstream 216404 32929517 ~ 32938098 (-)
G85476 NA non-coding downstream 226579 32927508 ~ 32927923 (-)
G85439 NA non-coding downstream 605624 32548347 ~ 32548878 (-)
LOC111193146 NA non-coding downstream 649343 32500280 ~ 32505159 (-)
G85528 NA non-coding upstream 92304 33247051 ~ 33310093 (-)
G85542 NA non-coding upstream 337713 33492460 ~ 33493021 (-)
G85561 NA non-coding upstream 481492 33636239 ~ 33636573 (-)
LOC111193147 NA non-coding upstream 611176 33765923 ~ 33803521 (-)
G85617 NA non-coding upstream 693813 33848560 ~ 33849769 (-)
G85501 NA other downstream 42768 33111474 ~ 33111734 (-)
LOC111193156 NA other downstream 662682 32449631 ~ 32491820 (-)
mrpl34 mrpl34 other downstream 2331804 30820119 ~ 30822698 (-)
LOC103036386 camk2n2,LOC107659987,LOC107557885 other downstream 2570681 30579943 ~ 30583821 (-)
map6d1 LOC108428296 other downstream 2798782 30334038 ~ 30355720 (-)
G85550 NA other upstream 354933 33509680 ~ 33518671 (-)
G85618 slc4a1ap other upstream 679265 33834012 ~ 33839629 (-)
rbks rbks,LOC107553733,LOC107656748 other upstream 800448 33955195 ~ 34012562 (-)
daam2 daam2 other upstream 1119644 34274391 ~ 34471605 (-)
G85902 tfb1m other upstream 2133485 35288232 ~ 35295034 (-)

Expression


Co-expression Network