adck1 (adck1,LOC107740534,LOC107680795,LOC107751735,LOC107676278)


Basic Information

Item Value
gene id adck1
gene name adck1,LOC107740534,LOC107680795,LOC107751735,LOC107676278
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 37144497 ~ 37395219 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007248483.3
tttATTTTTGTATCTTCAGTGCTGCACATGGCTAGCCGACTGCTAAAAATCTCCGCTGGAGTTTTTGGCGCTGGAGTTTTTTCCTCATCTGGATACTACCTCTACCACCAGAAGATTGAGCTCAATGACCTCAGCATCGTCAGATTTGGCAGGGCGGCTGCGACGaCGGCTGTCATCAGCTATGACTACCTCACCGCTTTCAGGAATGTTCCTTATGGGACAGAAAACTACTGGGAAATCAGATCCCAGGTCCACAAACGCTCGGCTGAGAAGCTCAGGGACGTCTGCTGTGCTAATCGCGGCACCTTCATCAAGGTAGGGCAACACCTGGGTGCTCTGGACTACCTGCTGCCTGAAGAATACACCAGCACGCTGAAGATCCTGCACAGCCGAGCACCTCAGAGCAGCATGGAGGAGATCCAGCAGGTCATCAGAGAAGATCTGGGGAAGGAGCTGGAGCAGTTGTTCATCAGCTTTGAAGAGAAACCCCAGGGAGCAGCTTCTTTAGCCCAGGTTCACAAAGCGGTCCTGCCTGATGGGAGGACTGTAGCCGTCAAAGTGCAGCATCCAAAGGTCCAGGCCCAGAGCTCCAAGGACATTGTTGTGATGGAGttctTATTACAGGTGGTCCACTGGCTGTTCCCTGACTTTGCGTTCATGTGGCTGGTGGAGGAGGCTAAGCGGAACATGCCTCTGGAGCTTGACTTCCTGAACGAAGGCAGAAATGCTGAGAAAGTGGCCAGCATGCTCAAACAGTTTGACTTTCTTAAGGTGCCCAAAATCCACTGGGACCTTTCAACCAAGCGTGTTCTGACCATGGACTTTGTGGAAGGAGGGCAGGTCAATGATCGGGAGTACATGAGGAGACACAGCATAGACGTCAATGAGATCTCGCGGAACTTGGGTAAAATGTACAGCGAGATGATATTTGTGAACGGCTTTGTGCATTGTGACCCCCACCCGGGTAACGTGCTGGTGAGAAAGTGCCCGAAAAGCAATAAGACGGAAATTGTTTTACTCGATCACGGCTTGTATCAGGTGCTGAACCAGGACTTCCGCATGGACTACTGCAGACTGTGGCAGAGTTTGATAAAGGGGGACATGAAGGGCATCGAGCGGTACAGCAGGCGACTGGGGGCTGGTGACCTGTACCCTCTGTTCGCCTGCGTCCTCACCGCCCGCTCCTGGACCTCCGTCAGCACAGGAATCAGCCAGACGCCCGTCACTCACTCTGAGGATGTGGAGATCCGTACGAACGCAACCCTGTACCTCCCTCAGATCAGTGAGCTGTTGAACAGAGTGCCCCGgcagatgctgctgctgctgaagacCAACGACCTGCTGCGGGGTATCGAGACCGTCCTGCAGACCCGCGCCAGCTCCAGCTCCTTCCTCAACATGTCCCGCTGCTGCGCTCGCGCCATCgccagGTATAAAAGAAGCAAGACCAATTCGAGGACCCGGCAGCTGCAGATATCGTTATCAGAGACTGTTACTCTGTGGCAGATCAGCCTGTATGAACTCATGCTGTGGATCCGGAGCTCAGTGTTAGCCAGCTGGATCTACTCCCTGCTCAGCTATTTGCCCTACACACACTGACCGACCCAGACAAGAGCCAGTCCACTGCCTGCCTCTCAAACATACAGACTTACATCACTACTAGCTTGGCTAAAGATGAATGGAGAGGTAATGCTGCTGGAGAAGTGTTGTCCTAGCAGGTGATCTGAGGTCAGCTTCACAGTGGCTGCTGTATGTCAGAGGGTCAGCAATCAGTAGGTCAGTGAGTTTTTAATGTTAACAATTATGTAATATAAGCCACAAGATGAAATGCAGGAGACTTAATGCTGAAGAAAACATAGTATATgtacactcattgacaaaaaacGTAATGCACCTAGAAGAAGATATGTTATATGTAATAAAACGTTATGTGTGTTAACCTATTAACATGCCTTGACCTATATActggctacaggtgtaggtgatacaaaagcctttttctctgcagtaaaataacttatttacactctaaaaaaatgtGACGGCTTTCACATCTCCTACAGAACACTTAAAGAAGCTACCTGTTTCTTCTCTACTTTACTTAATAATTGCAAATCAGTAGCAGGAATCaatccaaattctgcaggtttgaaaacagacattaaaaactagacaaacaaaatgaaacgaAAGGTTCGGAGGCCATACACTGGTTGATTTGTATTTAGGATTTGTATTGATTTCAAaataaagttcaggaaagagccaatttaatgattttattcaatatattttgaCAGTCTTAATATATACTTGACTAATTTTCTatactttctattacaatttTGATTTCCAGTAACGTTCCTTATTAAATATGAAagatttttatgtaatgcttgaatggAAATCCTGTAATGTCAGGTagaaaattaacaaaagtaatgagtaatgataatatataagaggaaaattatatgtttattcAGAAAAAGGTAGAATAGAAAGGAGTGCACCGTTTAGTGCTTTTGGTCTGGACACATTTGGTCATGGAGATATACAGGTTTtgtatggcatcctgcagcaaCCTAACCTACAGGTGTTgttacagctgggcctgtaaaTCCTGCTCTATATTCATACATTGTGAAAGCTGGCCTCTGCTTCCCTCTACTTCCATAAATACTTAATTGTTAAAAAATCTGGCAACCAGGTAGGCCAATCTGCTGCAATCTAGCAGAGACATTCCTGGAAATGCATCCTTGCTGtctgtgggtgagcattatcctgctgaaaaataccaGTTGTAAGCCATGTCAGTGACCCTTCTATGACTACTAGGGGTCACTGACTGTTGTTTGCTAGGAATGGCTCCCCAGATCATTACAGCAGATTGAGGAAATGTGTCGATCCAAAACAAAGCCAGTATTGATGCGCTTAAAACAATGCCTCCATACTCAAACTTGAAAATTGCTGGATTCCAAATATAATCTGAATTAATTACTAAAGACTATAAAGTCCTTTGCAGTCATTTTCAGCAATCtagcatttttttgtaaatgagtgtacatttacaaaaacaagaCAGAGCATCTTCTACTATAGCATGTTTACTTTTATAGCAGTGTTCAAGACGCACAAGATttctggtactgtatgtgtatttctgtgcattattttaGGAGTGTCAAGTGGTGTTAATATCATTTTTAGACTCTGTGTAATCCGTGAGATATTCTCAGCTAATCGTGGGTTGTGTAGGTGTGGACATACACTTGTGGCAGGATCTGTGGGGGAACCCTTCTATTCACATTCCTTCATTCTTCTGCTCTTTTCTCTCCACTGCACAGCCTTTTACAGATCACGGCACATCTATTTAAACCCACAGTGGAGTCCTACAGTCCTAAAAATAACGGTTTTAAAAAGCATTCTTAGAGATGATGCAACAGAAGAACAACTTTGGATTCTCTAAGGATCACATTTTTCGTGGATGGCTCTTTATTTATAAGTTGTTATCCTAAATgagatgaaaaatgtaaaagtttttcCAAATTCTAGAAAAGTTCTTAATTGATAAAAACCTTTCACAATACACTGACATACCAAATGTAGTAAAAACAGGAACTAATattatgtcccatgacttttgccatgtctcatgttggcatggacagttctagccagaaaCCACCATTCACGATTATTGCCACATACTGTGGATCTTAATGATGTATTCTCCATAAACACACAAGACACTGTGGGTTGAGGAATATTAAATGCCCAAACAAATTCAGACAATATGCCTTGCTCCTCATATTCAGTTTCACTtataagataacacctcacaacttgtacaagtgtgggcattcccaagctgtcactggaggtaacacttcatgaccaGTTTATATACTGCTGTCCCgagacttttggcatgtcagtgtgtatttGGATATAATATTAGGCTATATTAAGGTGGGCTGTAACAACACATATACAAAAACCTATAAAACTACCCAGAGACCATGCCTGCCTTGGTGTTGAGATAATCATTGTTTTATTGACATGTTAATTGACAGTTCAGTGTAGGATCCAGACATTAAAAGGTGTTCCATATATGCCATCACTTTAAATAAGTGTTTTAAGGTATGTAGACCTTTGGGAGAGATTactatgtactttttttttatttatagtaataatCATTGTTGAGTTTTGGTTTTA

Function

symbol description
adck1 Predicted to be involved in lipid homeostasis and mitochondrion organization. Predicted to be active in mitochondrial inner membrane. Predicted to be integral component of mitochondrial membrane. Orthologous to human ADCK1 (aarF domain containing kinase 1).

NR:

description
uncharacterized aarF domain-containing protein kinase 1

GO:

id name namespace
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function

KEGG:

id description
K08869 ADCK, ABC1; aarF domain-containing kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007248483.3 True 4221 mRNA 0.43 10 37144497 37395219

Neighbor

gene id symbol gene type direction distance location
tdp1 tdp1 coding downstream 1099387 35969637 ~ 36045110 (-)
kcnk13 kcnk13,LOC107680770,LOC107588297,LOC107751801,LOC107755770,LOC107693081 coding downstream 1209601 35921481 ~ 35934896 (-)
LOC103039887 LOC108437743 coding downstream 1232652 35891077 ~ 35911845 (-)
LOC103031708 LOC103031708 coding downstream 1426285 35694549 ~ 35718212 (-)
LOC103042065 LOC108437746 coding downstream 1511742 35607086 ~ 35632755 (-)
slirp slirp coding upstream 5369 37400588 ~ 37403021 (-)
hhipl1 hhipl1,LOC107740569,LOC107668615,LOC107680789,LOC107588281 coding upstream 206189 37601408 ~ 37617010 (-)
vrk1 vrk1,LOC106602366 coding upstream 1269906 38665125 ~ 38698331 (-)
LOC111193258 NA coding upstream 1376809 38772028 ~ 38781288 (-)
ak7 NA coding upstream 1441640 38836859 ~ 38857000 (-)
G86246 NA non-coding downstream 27288 37117000 ~ 37117209 (-)
G86212 NA non-coding downstream 665867 36477661 ~ 36478630 (-)
G86211 NA non-coding downstream 668229 36474071 ~ 36476268 (-)
G86210 NA non-coding downstream 670465 36471917 ~ 36474032 (-)
G86205 ston2 non-coding downstream 690277 36434710 ~ 36454220 (-)
G86294 alkbh1 non-coding upstream 10357 37405576 ~ 37409705 (-)
G86301 NA non-coding upstream 32764 37427983 ~ 37428393 (-)
G86308 NA non-coding upstream 48327 37443546 ~ 37444031 (-)
G86373 NA non-coding upstream 104614 37499833 ~ 37505351 (-)
LOC111193256 NA non-coding upstream 128464 37523683 ~ 37532108 (-)
nrxn3 nrxn3,LOC107755774,LOC107583487 other downstream 42916 36588904 ~ 37101581 (-)
G85902 tfb1m other downstream 1849463 35288232 ~ 35295034 (-)
daam2 daam2 other downstream 2672892 34274391 ~ 34471605 (-)
rbks rbks,LOC107553733,LOC107656748 other downstream 3131935 33955195 ~ 34012562 (-)
G85618 slc4a1ap other downstream 3304868 33834012 ~ 33839629 (-)
G86432 NA other upstream 587655 37982874 ~ 38069052 (-)
dicer1 dicer1,LOC107552827,LOC107671118,LOC107668604 other upstream 2412911 39808130 ~ 39858569 (-)
LOC111193261 NA other upstream 3138149 40533368 ~ 40536334 (-)
LOC103044865 NA other upstream 3367453 40762672 ~ 40770501 (-)
LOC103040189 NA other upstream 4377848 41773067 ~ 41804888 (-)

Expression


Co-expression Network