G70923


Basic Information

Item Value
gene id G70923
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 3277476 ~ 3291961 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU95668
TAGCatatatctatttattaatttgtccAATTATTTAAACTTCTGGAATAATGTAAACTCATATTCACAAAAGGAAAGAAATTGCTGATCATTTATCAATCATCATATCATCAATAAAATGAAAGCAatgataattacaataataatcattttgAATATAATAATTGTCTTCTTAACAATATTAACATTCACAACATGTCTCCATACGCTGAGGTGTCCCACATTTTAAACACGGAGTCTCCCCCCTCGGTTTGTAAGCGTTTCTGTGGTtctgtataaatatgtacattcCTACGCTCTAAAGCCCGTAAGAAGGACAGGGTGTGTATGGCTTGTCCATGGCTATGGCTAAGATTAAGGGTAGGATTCCCGCTCGGGGGACGTTTCATTCTTTAAGATTAGATACAACCTCTCATGACTTCAAAGAATAAATATAGCGCTACACAATGGGAGAAACGGTTCACTACCACTATCGTTCTCAGGAGGACTTTATACACAAAAAGGTGGCTGTAGAGAATcagcagctcctgctgctcAATACCGAGAACAATTCTCGAGGCTGCGTCTCAAATCAAACCCCTGTTCCCTATGTAGGGAAGAAGAAGCTTAGAAACTAAATTAATGTATAATACTTTTCTACATAATTCAATCAGTAACGGAGGATTTTAGagtggtgtttggtgtgaaatgatTTCTAGTTGATCGTCAAAAAGTCATGACATCTACATTACATAATATCTACAAGAATTTATAAATCATTTTCGGTTcatcaaacaaaaccaaaatcaTTACAGAACATCTGTATTGATTCCTAGCTGATTTTAAATCCTTCATTAAACTGATGAAATTACATAAAATCAAGAGTAATTATTTTGTTGGTCATAAACTacctagaaaagtgcatttcctgaaggaaaacGGCTCCCACCGTTTGCTaatgtggtttctatggtgttgctaggtggttgctaaggtgttgctatggtgtggctaagtggttgctatggagtctgtggtggttgctaaggtgttaatATGGTATCCCTGTTGATTGCTATgtagtttctaagtggttgctaaggtctttctatggtatccgtggtggttgctatgtagcTTCTAGGTGGTGGCTAAGATGTTGCGCTATGGTATCCACGGTGGTTGCAATattgtttctaaggtgttgctacagtGACAAAACATTGTAGCATTAATGATAATTTATAGTGATTTTTAGTTACTTTTTGTCAAAACTGACAAAATGGTGTAACATTAACGTTGTTTCATTGCTGCTTTTTCGTTTatcaattataaaattataaaatatagttgTATTTTAAGTCATAAATCAAACtgagaaaatcacattaattgCATCAATAATAATTCCTTACATCATCAAACTAAAACCAAGAAAACTGCTAAATTAACACTGACTGCTAGATGATATTAGATTATCCACCGAACTAACCGAATGGCAAAACATAAATATTACAAACTTACCAAAATAGCTTAAAACaataattgtaaattgtaataaaCAAAGACATTACATAACATCAGCGCTGATTCCCAATTTTTTCAGTGTTACTTTTTAGtagattttagttaatttacatAAACTGACAATTTGACATATCGGCCACATTTATTCCTAGATAATTTGGTCATCagccaaaacttaaaaaaaaaatacttaggTGATTTTAGgtcataaaaaacagaaaaatggtgcaacatcaatgttcattccTAGTTTGTTTCAGGTTGTctcccaaaacaaaaaaaatgacctAACATTAATGTTAAATTCAAAGTATTTTTTAGATCATTTACCAGAACCAATAAAAGCATATAGTCAACACTATTTAGCAAATTCATTTTAGTACATCTAAGAAAACCAACAAAAGGATGAAACATTAACTTTGTCTAATTTAGGTTAGTAGccaaaaactgacaaaataatGTAACATCATTGTTGACCTAGAGTTGATTTTAAGTTGATTTTATGTCAGAATAAGATTTAAGGTGATGTGAAGACAAAATGCCATAAAATCTAGGTCAAAAACCTTATCTACAATCTACATTAATTCAAAGTTCATTTCTAGTttcctagtttttttttttctcccagttttagtttttagattttagttaaTCGACATAAATCAAAAATTGATTCACATCAATTCACAAATCGGCCACATTTGTTCCTAGTTGATTTGAGGAGTGACACAGTGAACAGGGGGCGGATCTGAGGCGCAgcctttttgtttattgttggttCTTCTGTTCAGCTCCTCGCTTTTATTATCCGCAGCTTCTGCTGGTGGAGCAGAGCCGGGTCTGAGCGACCCAGAACCAAAACATTTAGGCACGGGGAAAGATTcgtataggtatatatatatttttttactttttttcttttttaactccATAAATAGTATCTGAATGCAGACAAAATAAGTATCAATACTTTCAAccacaacaaaaaaatcatctaaaaaaaataaataaatgaaataaataaataaataaatctgagggaaaaaaaaatgcaactgACTAAAAAAACCTACCAGCAAAAAACAACTAATGGTGTATATGTGTAATCATCTATCGAACATCGAGGAAGAATCATAAAAACAATAGGACTtggtaaaatgaataaaactgtataaatcaACAGGTCTCGGATCCAAAGTCCTCAGGCTCTATTTACAACAGAATCCCCACAGAAACCTGCAGCGGAACGTCGTCAGCTGCCCACCTCGCAAAATAAACCCATAAAACTCCCAATCTAACGGCCAGGGAAACTAACGGAAACGTCTGATTGCGTATATATgcatcagagtgtgtgtgtgtgagtgtgtgtctaaaaataaagaagataACAGTGGGACCGAATGAGGTATGACACTGCTAGTGACGCTGCTACTGCTTTCTTCTTTCATCagtatctgtatatatgtatatatatgtatatatgtatatatgtatgtatgtatatatgtatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtctccatgCCTAGGAGAGCATTATAGTACATTGCCACGATACAGTACATTGGTAATGGGTATATCTTTGTGCTTAAATAAAGTTCTAATATAAACAGAGTTAGATGGGCTATAGTCCTAGAGATATAAATACTAGATCATACTTCAGTGCGTTTATAGATTCTCTAAACTGCCGTTTCCTCTCAAAGCGAGTCCCTGCCGTTAGCTGATCCCGGTGTTCCCCATTTCATTACAGCCCTGTTCGctgtctcgctctctttctctcacacactcacacacacacatatatacacacacatgcatgcacacactcacaaagaaaTAACAAACCCATCCTGTACGCAGAACACGTCCACATCCCATCGAAAGCCAAGAGCTAAACGCTCACTCACAGGAGTCCAGGAAGACCATTAGAAACTGATGGACTGATTATCTCATGATCTCAAGATCTCAAGTCGATTTTCCAGAATAACCAAAGTAGTTTTCTCAAGATTATCTGAttgatataattttattaccaatttaaaaaaacaattacccCGCCCATTCATTACGACTAGCATATAAGCGCCAGATCCCAAGatccaatacatcagctaacagatagGGGATGATGCtaaggagagagcgccatctacccttccagagagagcatggccaattgttctctctcagactccggctgctgaggtGATCCTCAGATCAGTGTTAGAGCCacagcccgctggaccactctgaggcCCATGCtattatatgaaaaaataaaaatgtattatttgtttttattataaatagtgcttttcattatataataaattatataaatttttcAAGATATTGAATTGGTTATTAAAATCGCTTTTCTCGAGACGAGGAATTGTAATTTTCACAGGATAATGAATCATGCTTTTCTccacataaggaattatgttTTTCCTCAAGAAAAAATAATGATGCTGTTCTTAGGATAAGGAACAGTATTTTTCTCAACAATTCAATTATTCAAATATGTTTCTCATAATAATTGCATTTTTACAGAGAAAACAAATGGTGCTTTAATGGTATTGAGATAAGGAAtggtgctttttaaaaaatggggTTCTTTTAAGATATCTTTCAagataataaattatttcttaTGATAAAACGACTTTTCTCAAGATTCAAGTTtctcaagaaaaaaaatgttttatataataatctCTAAAAACTGTTACTATTAGTTTACAGGAATTCATCAcaagaaaacaacttttattattctgagaTCACAAGAAAATAAGCTGTGATCAAATAAAATGAGCTCTTTCTGGACTTCTGTAGAAGTGAACCAAGTAGGTCATCTTTTCTATCAactcacaccctcacacacacacacacacacacactcttacacataaacacacacgcacacacagactcatacacacacacatacacacacatttgctCTGTTCTCTCGGCTTGTTTCGGTGTCCAGTCGATGAGATGAGGGGATGCGGATCCTTGAAAAGTCCTCAGAAGCAGCAACAGCAAAAGTCCAATCAGAGACGGAACTCTTCGCTCCTGTACAGGTAAACAGACTCCGGAGCGTCGGGGGGGGGAAGGTAGAGAGAGTGTCCCGTGTGCTCCTGCGTgttaataaagtttatttttcttcttctttttttttaatcccctGTTTTGTATAGAGCTCTTTAGGCACAGAGAAGAGGCTCCACCCACCCGGCGGCGAGGGGAGGGGCTTCTGAGCAGTATGGCAACATCTGATTGGCTCAGAAAAGACCACACctcctttaaaaagttttgaaaaggcttgatataagaaaaaaacaaacaaaagcaaacaaaaaaaaaatacaatctgaccaaaagataaaacaaaaaaacgaaaGAAACCGAAAACCCAAGAAGTGTTATTGAGTCATTATTAGGAAGAGGAGGCTTGTGGGTTATGTAGTCATTAAGAAGAGACCACGCACACACAAGAGACCAACACACAGCCTCTCTCTACGGCCATCATGCTGAGATCGACGGATACTCCTGCTGAGAGAGGGCGAGGAGGGAGAGATAggggagagcaagagagagagagtgtctgGGGCGTGCGACGTAGGTGGAAAGTGAAGGATTAATTAATGAGCGaagtccctctctctctatctctctctccctctctttttctctctttgcgGACATTTTTCTTCGTAATAAAGATCTGAATGCGAAGGCCATAGAGTCATAGAGTCTTATACAAGAGCAACAGCCTCAAAACTGTGACTCCCCTACGTACAAAAAAGAGCTGATTGTCATTATTTTGGCTcaataaagagaaaacaaaaagagagggagagaaagaaagaggaaagaggGGCGAGAGACACGCAGATTCTATCAATGAGTGTGTGCTTTTTCGTTTGGAGAGGCGTGATGCGTCGGGAGTGatgctcttcctctctctctctctctttcctctctcctctctcagccaatcagacacAAGAGAGAGGCTCCTGGACCGACGGCGGACCAGTCGCGTGTCCTTTCGTGCTGCTGTGGTCAATCATGTTCCGGTGTGACCACCGTAGATTGGCtCTCCTGTAAATATTCGTGATTTGAGGTCGGGAACACCACTCCCTCTCAACTCATCCTCCACCGCCATCAGCCTGCAACACAACATACAACAACACAATCACACaacaacacaataacacacaacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95668 True 5765 lncRNA 0.37 3 3277476 3291961

Neighbor

gene id symbol gene type direction distance location
LOC103047641 c14h5orf24,LOC108439806,LOC107594921,LOC107668575,LOC107749736 coding downstream 249783 3023419 ~ 3027693 (-)
LOC103025117 NA coding downstream 257723 2982047 ~ 3019753 (-)
rmnd5b rmnd5b,LOC105026275,LOC100306854,LOC106612137 coding downstream 294830 2958649 ~ 2982646 (-)
anxa6 anxa6,LOC107750364,LOC107594885 coding downstream 460941 2764145 ~ 2816535 (-)
dctn4 dctn4,LOC107749746 coding downstream 598571 2661511 ~ 2678905 (-)
tmem65 tmem65,LOC103374125,LOC100698042,LOC102786671,LOC101476933,LOC104966521 coding upstream 6249 3298210 ~ 3317552 (-)
rnf139 rnf139,LOC106569923 coding upstream 31937 3323898 ~ 3335786 (-)
tatdn1 tatdn1 coding upstream 44248 3336209 ~ 3346476 (-)
mtss1 mtss1,LOC106569924 coding upstream 70610 3362571 ~ 3407431 (-)
LOC103024174 LOC108442487 coding upstream 169276 3461237 ~ 3508996 (-)
G70812 NA non-coding downstream 160387 3116884 ~ 3117089 (-)
G70809 NA non-coding downstream 161481 3110805 ~ 3115995 (-)
G70795 NA non-coding downstream 194271 3082976 ~ 3083205 (-)
G70769 NA non-coding downstream 321302 2954612 ~ 2956174 (-)
G70771 NA non-coding downstream 325559 2951573 ~ 2951917 (-)
G70926 NA non-coding upstream 13558 3305519 ~ 3306018 (-)
G70927 NA non-coding upstream 17491 3309452 ~ 3309851 (-)
G70938 NA non-coding upstream 122627 3414588 ~ 3415039 (-)
G70946 NA non-coding upstream 158944 3450905 ~ 3451612 (-)
G70947 NA non-coding upstream 162916 3454877 ~ 3455224 (-)
tnip1 tnip1,LOC107594924,LOC107750363 other downstream 532404 2704195 ~ 2745072 (-)
LOC103042850 cratb,LOC108435838,LOC108274804,LOC107561339,LOC107758403,LOC105903715,LOC107563340,LOC107679039 other downstream 2242460 1009886 ~ 1035016 (-)
LOC111193045 LOC108442482,LOC102793828 other upstream 152134 3444095 ~ 3458810 (-)
LOC103023864 NA other upstream 283600 3575561 ~ 3703751 (-)
LOC103042226 LOC108274609,LOC107701883,LOC100536156,LOC107747745,LOC107574915,LOC108442488 other upstream 444665 3736626 ~ 3848624 (-)
G71175 NA other upstream 1119987 4411948 ~ 4413011 (-)
G71235 NA other upstream 1590209 4882170 ~ 4884488 (-)

Expression


Co-expression Network