CI01000009_05798886_05836104 (PLEKHM3)


Basic Information

Item Value
gene id CI01000009_05798886_05836104
gene name PLEKHM3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 5797882 ~ 5838430 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_05798886_05836104.mRNA
ATACTATTTTTTTTTTTTTTTTTTGACTTTATGATTCCCACACTCTACATGCAGGCCTTAACTTTGCTTTGTCACTGCCTCAGTGTGTAGATTGATGTTTGCTGTGAGATGGCTAAAAATAGAATGGCAGAAGAGGGCCTCTACATCTCTGTCTAAATAGTTTGTCTACAAGCAGAGGTGTGAAGATCACCGGCTCAAATTTTTACTGTTAAAGGTCTGGTTCTCATGCTGGTCTAGAGTACTAAGTTTTTCCAAAACTGTTCAAAAATATTGTGGTTTGATCACTTAATTTCCCTCAAAAATATAAATTCTGTCATCCTATAGGCCACATACACACTGCAGCTAAATTCGGACAGGTTTGAGAAGCACTGGTTTAGTTAAATTTGCAGAACGCAAGTCTTTGGTCACTGCGATATTACTTTGGTACAAAACACACAAGAGGCAGAATGTTGCTATGTTTACCATGGTGTCAATCATTGCAATTTCCCATAATTAAGTACAGTTGTCACTCCTGAAACTTTAGTGTGTACATGGCCTTACACACCCTCATGTCAATCTGATCCTGTATGACTTTTCTTTCTTCTGTGGAACACATTTATCCACGGCCTTCATTTTAGTAGTGTGAAATTGATGATGCCTTGCTATGATTTGTGCCTTGAGTTTGAAGAATGTTGAGACTTTTTAGAAAATATCTTTTTTGTGTGTGTTTCACAGAAGTCAAAGGTTTGGGATGACATAATGGTGAGCTAATGATGATAGAATTTACATTTATGTGAGAACTATCACTTTTTAAGTTTTGCTACTCATTATTTTATAGTATAGCTTGATTTGATCTCATGCAAATTTGCTTGTTTTGTTGGTGGGTTTTAAACCAACGGAAAACATCCATTCGCACAGCTGTCTGTTGTTTGGTGAGCCTCTGCTCTGAGATGATGTAATGGGCTTTTTAATAATTGATGGTTAAAAGAAAGTGAAAGACCCTTTGCCGGAGTGCGGAGGAAATCAATGTTAGTGCGGGAGGATGTAGACATGAGTAAGATGAGGAGAGGCTGCATAATCATGTGAAATGAAAACAGAACCAATCCGTGCTCATGTTAAGAGAGGCAGAGAACCCTACCCCAGGCTGGAAATGTCCAGTGATGTCATTGGTTTGTCTGTGTACCCGAAGCTCTGGACATAAGGTAGCCTGCTGAACGGATTCCACGGTGCCAAGGTAGTAGCGTGAAATTGACAATGTCTTGTTATGATTGTGCCTTGAGTGTAAACACAGGTCAAGGTGAGCGGAGTTCAGCTGCTGTATCAAAAGAAAGCAGCATTATGGGCCATTCACACAAAACAGATTTTGTTTTTAGAAAAGAGTGCAGACTCTTGAAATTTGAGCTACTCTTTCTGTGCATGATGCTGAAAAAATAGCAAGATGTGGTGCAACAGGGAAAGTTGTCCATTGTAGACACAAACTGCATCCGAAGTAGGTGACACATTTGAGTAGGTACCACATTGAAAAGTATGTTCTTTATAGAAGTAATCTCTAGTTTGAATGTAATATGTATTACATTCGCCATGTTGTTGACATACCAGCCTCACAGAGTTGCTGGCTATGTAGAGCATTCAGAATCAGTCCATTGCAGAGAGTATGCCACCTTAGAAGACAATGTCTATATAGGTGGCAGACAGCAAGGAAGCTCACTAGGGTTTGGGACAGAGCTTGGTTTTTCAGAAAAATTACTTGTTTTTATTTTATAGTTGGGGCTCAACTGTTGTACAATTCCTGAATCTGATGTCATACTTTTTGCTCAGAGGCTCATCATACTAGAACATCAACTGTCCAAAGAGTTATTTTGCTGACTGTATTGTGCTTTTCTTTCTTGTTTGTCTAAATTTAGGATGTCGGGCTCTGGGGAAGGACGACCCGGTGCCATCTTGCATTTATCACTCACTGAATTACCGCCTTACTGACTGCAGTGATTTAATTGAGGCACTTGTCTGAATGAGGCAACACCTGCTCTAGACAGCTCTGAGTTTGCACTCGGGTTCTGCTGACTTCACCTTACCCAGTGGTGATACTGATAGCTGGCACAGCGGTCAGTTCTCATTAGGTGCTTGATTAACAACGTTGGCTCATAAAGTGACAGTACTGGAAGGGGTTCAGGCCTTTGTGGACCATCTGTTTTTGCCACACTCCTTTTGGGTTCAGACAGCAGATGTTCCGTCTGCGGTGCCTTGAGGCTTCTCGATCCTGCCCTGTCTACCCTTGCACACGTAAGGAATCTGTCCATTTGCCCCACCCCTCCACTTCTGCTTTTGTGACGCCAAAACTGTTGAGGTGATGGAGGGTCTGGACGTCGAGGACATTAGCCCCGCCCTCGAGGCCACTGAGGACTACCTGCACTGCCTCGCTGACAATCAAGGGGATGGCCAGGTACGTCCGCCCAAGCTTAAAGAGGCATCCACCATGGACAAGTTGAACTCCAGTGGGGTGTGGGGGCTACTGACAGGAAAGCAGACTGAGATATCACCAGGCAATATGGCCTGGGCGGAGCAGACGTCCTTCAGTGTGCTGGGCCTACGACATGGAAAAAGGAACCGGGCACGATCCACCAATGATTTGGCTGCTCATGCCAAAGAGACAAACTCCACCAGCAATACGTCCAATGGCGGCTTCAAACGTGGCCACAACCGCTCCCGTTCAGACGTCAACAACCGCACTTACACCGATAATGGCATGCCAGCCATTGACAAAAATACATTCAAGAACATGGCACTGAATGACTACAGAGATGATTTTGAGTCATCACTGATGACTGTTTCCCTCGTGCCCATCTCTCATAAGGAAAGCAGCCCAAGCCTGGTGAAGCAGGGAACGCTAGAGCAGAGAGAGGGTCCGTGGGGACGGTGGACCGCCTGTCATGTGGAGCTTACGCCCTGTGAGCTGCGTCTCTACAGCCTGGACAGCAGTGGCAACCAGCAGCTCTGTGCCGCCCTTTCGCTGTCCCACTGCCAAGGGGTGAGTGCTCCTCAGCCACAGGATGGACGTGTGTTGCAGGCCGTCTTCTTTAACAGCACCCGTGTGCAGTTGCGTGCACCGTGCCAGTGGGAGGCACTGGAGTGGCGTAGGCTCCTTTGGGAACGCGTCTTGGCCGCCCGTCCAGCCCATCGCAAAGGGGAGCCAGCTCGTGCCAGCTCCCCTACCCCCCACGAACCCGATCCAGACGCGGCGACTGTGCCAGCTCCTCGACCGCTGATACGTCCCACGGCCCTACCACTGTTCACCCAGCACTGTGCCGATGTTCTTAAGGCTGGCCTTCTGCACCAACTCACTGACCTCAACAACTGGAGGGCCTTCACGTTTGTACTAAGCCGCACCGAGCTGCAAGCCTTCCCGACCGAGGGAAGAGGCCCGGTGTCGGAGCCGGTGCTGCGGTACCGGCTGGCTTGCTGTTTGGCTGTGCAGCGGGATGATGAAGACGGAGGCACCAGCTCCCGCTTCCAGGCGGTCTTCCCTGATGATGTGCTGTGCTTGCGGGCAGAGAGTGAGTCCAAAACCCAAGACTGGGTGGAGGCCCTAAGAACAGCAGTGACGGCTCAGCGGCCACAACTGGAGAATAATCAAGTCCCCGGCGGAGTGCTGATGAGGAGTAAGCCAGCCAGGGAGCGAAGGCACAGGGAAGCCCAGAGAGCTAAACGACAGTCCGTCACCACTAGCTTTCTCAGCATCCTTACCTGCCTGGCTGTAGAAAAGGGTCTCACTGCTCAGAGCTTCCGATGTGCAGGATGTCAGAGGCCAGTGGGTCTGTCACGGGGCAAAGCTAAAGTTTGCTCTTACAGCGGCTGGTACTACTGCCCAAGTTGTCACCAGGACAACCTCTTCCTCATACCTGCTCGTCTACTGCACAATTGGGACACTAATAAACACAAGGTGTCGAAACAAGCTAAGGAGTTTCTGGAGTTTGTTTATGAGGAGCCATTGTTAGACGTCCAGCAGTTGAACCCATGTCTGTATGAGCATTGCGAGGCGTTGGCGGCCGTTCTCAAACTGAGACAGCAGCTCCAGTCTCTCAGGGCCTACCTCTTCAGCTGCCGGGCCACAGTGGCAGAAGACCTCCGCCGCAGAATGTATTTGGTTGTTGGGAATAAGCAGATGTTTAGTGGATTCCTAAAGTCCATGTTCAGCAGGAATGTGAAGGAGCTGTGTTTATGGAAAGGTTTCGGCACTAAAAGGCTTGTCTATGTGATGAATGCTTTTCACTCTTACCAGGCTGTGTTTGTGGTCTGCAAGGCTGTCTCTAATTCCCAACATCTGTCTGACGGGCTGCTAATGACGGACCCAAGCCACTGTGGAAGCGGAGTGGAGGAACTATTAGTGGGCAGGAGTAAAGATGCACCGGTTTCCAGTGCCAAACTACCTAATAGATCCAATTTTCCAGCCTTTTGTGGATCTTTCCGAGAGAATACCTGTTACAGCACGTGCACCTCTACTCATTGGCAGACCTGCAGCAGGAATGACCCCTGCCCTTATTTTTCTGTTGCTCTCAGAACATCTATTCTCCTGTCCCACATCCCCTCTCCCTTCTGTCTCCCGAGAAACATCAACTTTCGTAAAACCGTCTTGCTTCTAGGATGCCTACATCACACCTGGTCTGCTGTGACCAATGCGTTCACATGGTCCACATATGTGATGATGGATCTTCATGCTGTTTCTCTCGTGCCCATTTTACACGCCTTCCCGTCCCACCCTCCCAAGCTCTCCTGCTCTACTGTCCCCTCTTCTCCTCCTCCATTCTGTGGCTGGCTCCTTGTGGAAGGGCTGAAGAATGCTGGCAGGCCCTTTAATTGGTGTGCTGCAGTGCTGCCAGGTGTAGCCACTTGTCTCTGCCCCCTTGGTGAATATGCACTGGAGGTCATAGATGGAAAGCTTGCTCCATTTCTCTCCAAGGTGATCAAGTTTGCCAGCTCTCATGTCTACAGCTGTAGTCTGTGCCGGGAGAAGGGCTTCATCTGTGAGCTTTGCCAAAACGGCCAGGTCATCTATCCCTTTCAGGAGAATTCCACCAGAAGATGCGAGGGCTGCGGAGCCGTCTTCCACGCAGAGTGTCGGATGCGAGCCCAGCCGTGCCCGCGATGCGTACGTAGAGAACTGCACAAGAAGCCGGCGTCATTCTGGAGGAGGCACGGCCCTCACGACAGTCCTGATGACGAAGTGCTAGACTGCTTTGAGCTGGACACCTGAGGCGGTTTTTTTGAGAGCTGTGCCGAGCACACTGCACTAATGAAGTCCTAGTGCTGCTGTATCCAAGAAGGACAAGATACCGTGGTCCTTCGGTGGAAGTGCTCTGTGAAAACCGAGAAACAGAGGAGTTTTTGTTTTTTTTACGTTCTCCCTCACCTGAGAGAGATGGGCACAGAGACAATAATTCAGCTCCCGAAGAGCAGAGGCTTCATAATGATACCAATTTACCCTTCCCTTTCATCTACCAAATGACAGCCAGGGCCAACCGACAAATACAGGCAAAGTACGCTCACACACTTGCACATAAACACACTCTCACTGACAGATGTAAAATAATGCACTTTTTGGCAGACTCGCAATCCAAGAGCGATGATTCAAACCAATTTCTGGACACAAAAAGAGCTTCTAATCCATTAATGGTTCTGTGAAAATGAGCGCTGCAAGATGGCAGTCTGGCCGCTCCATTTGGTTTCCCTCCACGCTAACCTACGATGCCGAAGAGTGCATGAAGGCTGAACATGAAGATGAACATCCTTAGAACAAAAATATCTTTTTTTTTCTGTTTTCACATGATTTCCTTGTTGCATTTTCACATTTGCAATTTGTTCAGTGTTTTGTATTTATTTATTACAAGTTCTTTGCACTTTCAGTCACAGTATGTTTCCTTACCCATTTTCATCTTAAATCAGCTGAAGTTTAAAAAGTTTGACTGTTTATCAACACTCAATGGCAGTGCCTATAAGCAGCCGAACCACGTTGTTCTTGCTAACCGCCTGGTCTATGATTACAAACTACCCATCGGCCACCAAGCCCCAAAATTACAGTCTAGAGTTCCAAGGCTTTGTTTAGCATTCATACTTTTTTTTTTTTTTTTTAACAAGATACGTAAAGCAAACCCGCCGTGGACAAGCTCATAATTCATGTCCGACTGGCCTCTGATCCACGCTGCCTCTCTGCGCTCATACTATGTTTTCTTTCTACTTGAACATAGAATTGGCAATAAA

Function

symbol description
plekhm3 Orthologous to human PLEKHM3 (pleckstrin homology domain containing M3).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_05798886_05836104.mRNA True 6231 mRNA 0.48 13 5797882 5838430

Neighbor

gene id symbol gene type direction distance location
CI01000009_05784097_05785842 FZD5 coding downstream 12040 5784065 ~ 5785842 (-)
CI01000009_05759177_05759509 NA coding downstream 38112 5758999 ~ 5759770 (-)
CI01000009_05724421_05725824 NA coding downstream 72048 5723841 ~ 5725834 (-)
CI01000009_05675971_05682578 NA coding downstream 114499 5675772 ~ 5683383 (-)
CI01000009_05571226_05587885 NA coding downstream 209867 5570501 ~ 5588015 (-)
CI01000009_05844758_05855489 IDH1 coding upstream 5698 5844128 ~ 5855944 (-)
CI01000009_05949578_05961385 ARMC8 coding upstream 111148 5949578 ~ 5961385 (-)
CI01000009_05977117_05981366 CDC25C.L, RAB5D, RAB5D.S, RAB5B coding upstream 137683 5976113 ~ 5982698 (-)
CI01000009_05994558_06000514 NA coding upstream 156128 5994558 ~ 6000514 (-)
CI01000009_06046712_06060022 NA coding upstream 207444 6045874 ~ 6060442 (-)
G54000 NA non-coding downstream 45717 5751940 ~ 5752165 (-)
G53997 NA non-coding downstream 51094 5746575 ~ 5746788 (-)
G53988 NA non-coding downstream 67018 5730634 ~ 5730864 (-)
G53916 NA non-coding downstream 201204 5585039 ~ 5596678 (-)
G53566 NA non-coding downstream 244781 5552890 ~ 5553101 (-)
G54032 NA non-coding upstream 154755 5993185 ~ 5993404 (-)
G54065 NA non-coding upstream 180616 6019046 ~ 6019356 (-)
G54068 NA non-coding upstream 184183 6022613 ~ 6022827 (-)
G54077 NA non-coding upstream 203028 6041458 ~ 6041667 (-)
G53515 NA other downstream 292634 5502395 ~ 5505248 (-)
G52828 NA other downstream 1566413 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 2535925 3261038 ~ 3262843 (-)
CI01000009_02885473_02893975 NA other downstream 2898475 2883688 ~ 2893975 (-)
G52410 NA other downstream 3235349 2551724 ~ 2562533 (-)
G55814 NA other upstream 2587391 8425821 ~ 8428012 (-)
CI01000009_08858198_08860555 NA other upstream 3019722 8856310 ~ 8860563 (-)
G59097 NA other upstream 6449787 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 8136958 13975099 ~ 13978614 (-)
G59490 NA other upstream 8195134 14033564 ~ 14037873 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037188 plekhm3 coding NC_007120.7 CM002893.2 28140089 ~ 28208549 (+)
rainbow trout (Oncorhynchus mykiss) LOC110520227 plekhm3 misc NC_048567.1 CM023221.2 55068639 ~ 55122013 (-)