G14647


Basic Information

Item Value
gene id G14647
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 30281776 ~ 30338926 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU19656
attggtggaaacttcacactagacctcgagcagtttggactgtgtgtctctccactcttcctccagactctgctcccttgatttacaaatgaaatgtaaaatttatgattactgatgatcagtgatggtttgtagagacatgtcatctgctggtgttgatccactgtgttttattatcaagtctaaagtcagtgcagttttgttttcccacaaaatcttacagcatttcatgcttcttccctctgctactgacaactttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19656 True 260 lncRNA 0.50 2 30281776 30338926

Neighbor

gene id symbol gene type direction distance location
c2h17orf75 cunh17orf75,c2h17orf75,zgc:153240,LOC107690268,LOC107729180,LOC107590573,LOC107567861 coding upstream 3337 30269188 ~ 30278439 (+)
LOC103042681 xylt1,LOC108439755,LOC107690267,LOC107567884,LOC107729195,LOC107590574,LOC107733871,LOC107686990 coding upstream 62643 30105857 ~ 30219133 (+)
rab40c rab40c,LOC107567894,LOC107685905,LOC107590575,LOC103366693,LOC107690266 coding upstream 339517 29913242 ~ 29942259 (+)
pigq pigq,LOC107690265,LOC107733876,LOC107590576 coding upstream 373990 29895552 ~ 29907786 (+)
clec16a clec16a coding upstream 417292 29761978 ~ 29864484 (+)
LOC111194304 NA coding downstream 60494 30399420 ~ 30407723 (+)
LOC103043304 LOC108413484,LOC107688368,LOC107602377,LOC107654743 coding downstream 138861 30477787 ~ 30663029 (+)
LOC111193882 NA coding downstream 230860 30569786 ~ 30572341 (+)
LOC103032439 NA coding downstream 480045 30818971 ~ 30864806 (+)
LOC103044820 NA coding downstream 532252 30871178 ~ 30879890 (+)
G14642 NA non-coding upstream 2188 30278817 ~ 30279588 (+)
G14629 NA non-coding upstream 47625 30222567 ~ 30234151 (+)
G14625 NA non-coding upstream 207301 30073999 ~ 30074475 (+)
G14619 NA non-coding upstream 243079 30038484 ~ 30038697 (+)
LOC111193871 NA non-coding upstream 539043 29741786 ~ 29742733 (+)
G14695 NA non-coding downstream 91135 30430061 ~ 30496599 (+)
G14699 NA non-coding downstream 180291 30519217 ~ 30544734 (+)
G14697 NA non-coding downstream 299388 30638314 ~ 30666460 (+)
G14731 NA non-coding downstream 365436 30704362 ~ 30704623 (+)
G14737 NA non-coding downstream 412918 30751844 ~ 30752714 (+)
G14638 rps15a,MGC114789,RPS15A,LOC107686992 other upstream 13394 30260677 ~ 30268382 (+)
G14505 NA other upstream 539053 29733305 ~ 29742723 (+)
nubp1 nubp1,LOC107690260,LOC107685912 other upstream 561184 29674110 ~ 29720592 (+)
G14480 NA other upstream 883610 29395160 ~ 29398166 (+)
G14444 NA other upstream 1152403 29129067 ~ 29129373 (+)
LOC103032125 NA other downstream 400118 30739044 ~ 30772153 (+)
LOC103035097 fam193b other downstream 822141 31161067 ~ 31177592 (+)
smim13 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766,LOC107669968,LOC107734024 other downstream 1702109 32041035 ~ 32045063 (+)
G14985 NA other downstream 1835475 32174401 ~ 32178598 (+)
G15160 NA other downstream 2582098 32921024 ~ 32924785 (+)

Expression


Co-expression Network