G207557


Basic Information

Item Value
gene id G207557
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 23528435 ~ 23529136 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU281701
tgtgtgaggtgtgtgtttgtattctgAAAGTGTGAGTATGGGtgcacctgtctgtctgtctgtctgtctgtctgtatgagtgtgtaaaagtgtaatgtgtgtattttgtctgtgtttttttgtgtgtgtatgtgtgtgtgtaaatgtgtaatgtgtgtttttcgtgtgtgtgtgtctgttgcaaatgtgtgtgtgtgaggtgtgtttcCCGCCATTCTCCTTCAGTTGTTCACcgacgtgtgtttcagaacaCAGCTCTCGGACAGCTCTTtgcgcctgacactctggctgaaactccaccctctttgacttggtctgcctaacaacagagcgatctatattctgattggctcaacgagagtacattataatatgcagccgaTGGatttggcaagcgtgagaaataccatgtgtggcgtgtgagcgtgtgaactcgctgaggtgcgtgtgtcacacgctcaaagcgtgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281701 True 470 lncRNA 0.46 2 23528435 23529136

Neighbor

gene id symbol gene type direction distance location
syt9 syt9b,syt9,LOC108410565,LOC107572357,LOC107707488,LOC107686648,LOC107701097 coding downstream 267081 23202018 ~ 23261354 (-)
LOC111195748 NA coding downstream 303380 23224605 ~ 23225055 (-)
olfml1 olfml1 coding downstream 360949 23161946 ~ 23167486 (-)
LOC103035009 LOC108410563,LOC107745924 coding downstream 368759 23053191 ~ 23159676 (-)
rep15 NA coding downstream 475175 23052373 ~ 23053260 (-)
LOC103046977 LOC108410746 coding upstream 82927 23612063 ~ 23655103 (-)
tcp11l1 tcp11l1 coding upstream 128098 23657234 ~ 23665880 (-)
mpped2 mpped2,LOC108269255,LOC108415426,LOC107572223,LOC107589164,LOC108415121 coding upstream 643153 24172289 ~ 24213659 (-)
LOC103032449 LOC108412069,LOC108268535 coding upstream 881692 24410828 ~ 24416431 (-)
ciapin1 ciapin1,LOC107735894,LOC107682982,LOC106904989,LOC107577787 coding upstream 979101 24508237 ~ 24514730 (-)
G207551 NA non-coding downstream 238407 23247533 ~ 23290028 (-)
G207552 NA non-coding downstream 285162 23241744 ~ 23243273 (-)
G207531 NA non-coding downstream 429529 23095821 ~ 23098906 (-)
G207536 NA non-coding downstream 476368 23051066 ~ 23052067 (-)
G207514 NA non-coding downstream 665418 22763398 ~ 22863017 (-)
G207604 NA non-coding upstream 373778 23902914 ~ 23903144 (-)
G207616 NA non-coding upstream 441181 23970317 ~ 23970947 (-)
G207617 NA non-coding upstream 442659 23971795 ~ 23972789 (-)
G207618 NA non-coding upstream 444148 23973284 ~ 23973564 (-)
G207623 NA non-coding upstream 450573 23979709 ~ 23980351 (-)
LOC103033401 spon1b,LOC108413171,LOC107701107,LOC108269023,LOC107745929,LOC107686649 other downstream 115481 23220469 ~ 23412954 (-)
LOC103035944 mical3 other downstream 572411 22885432 ~ 22956024 (-)
LOC103034681 LOC108436714 other downstream 1281322 21764104 ~ 22247113 (-)
LOC111195740 vma21,LOC108436707,LOC106604103 other downstream 1545705 21979799 ~ 21982730 (-)
LOC103039395 rps6ka6,rps6kal,LOC107572332,LOC107674878,LOC102207076 other downstream 2745451 20677453 ~ 20782984 (-)
dnajc24 dnajc24 other upstream 409789 23938925 ~ 24020314 (-)
G207707 polr2c other upstream 995598 24524734 ~ 24529067 (-)
G207772 NA other upstream 1418995 24948131 ~ 24948851 (-)
usb1 NA other upstream 1722099 25251235 ~ 25260167 (-)
G207903 NA other upstream 1787866 25317002 ~ 25352674 (-)

Expression


Co-expression Network