olfml1 (olfml1)


Basic Information

Item Value
gene id olfml1
gene name olfml1
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 23161946 ~ 23167486 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228458.3
TATTCGATACTTTAACTTCTCCTGCTCCTCAGAAAAGAAGAAGCACTCCTCGGTTGTTTTAGGTTTGAGAACATGGCAGATGCATGATCCTAAAGCTTTTTAATGCATGATGTGATCTGTAGCTACGCTCTGCTGCTGCGTGGGGACGTGTCAGGACATCTGGAGACGATTAGAAGTCCAAACAAAGCAGCAGCCTGTGAGGACCTGCCTCTAAAGTTCATTTGGGCTGAGTATCAGAAACTGCGTAGCGTGGAATAATAAACAAGCAGATGCTTTCAGAATTTCAGCAGACTGCACTTCTCTCGGACCGTGCTCGGATCGGACAGAATTTCCTCTAATTATTAACACGAACTGAAAGTGATTAAGGAGGAAAAAGGAGGTTTGGATGCTCAGGATGTTCTTGAAACTCGTCCCCCTGCTGTTCCTGTTCCTGGGTGCAGCACAAGCTCAAAGAACCACCCAGGATGTGTTCATGATGCAATACTTCCAGAGACGACTGCAGGAGCTGGAGGAGCGTGTAATCAGGTGTGACCAGGACCTCCAGACCGTCAACCACAAGATGTACGACGTTTCCGCTGAGGTGCGAGGTCAGCTCCGCGGTGTAACCGCGCTAAAGACCGAGATGCAGGGACACATGGAGAATCTGGCTTTGCGAGTGGACCGCGTGGAGAGAGACGTGGAGTATCTCCAGAACAAAATCCCGGAACTGTCGGAGGTGGAGATAGCAGAGTCTGTGCTGGAGGAGCAGGTGAAAGAAGccaaggagaagaagaaagctGCCATCCCGCAGAACAAAGACTGCAGCTCTCAGCTCACCGGCATCAAGTCCCAGAAAATCGTCAAGAAAGCTGGAGACCTGAACGGCTCCTGGATGAGGGACCCCACCAAAGGATCCTCAAGGATCTACTTCTTCAGCGGCTCCAGGAACCGAACTCTGCTGGAGTTTGTCTCGATGAAGACCTTCACTGACACTAACTGGACCAGAATGGCTGAGGCCATCCTGCTGCCTCTGCCCTGGCAGGGGACGGGGAGCGTGGTCCACGACGGCTTCATCTACTACCACCACGCCGACACGAGAAACGAGGTGCTGAAAGTGCACCTCCTCAACCGCACCGTTGTTGACCGCATGCTGCTGCCCGGCGCTGGACGCATGCCGGCCTACGGCCTCTCCCCTCACACTCTGCTGGACCTGGCTGTGGACGAGATGGGTCTCTGGGCCGTCCACGCTGACCCAGACTTTGGGGGGAACCTGGTGCTCACCAAGCTGGACTCCAACAGCCTGTCCGTGGAGCACACCTGGGACACCACCTGCAAAAGTGACGAGGCAGAAGGGGCTTTTATCATCTGCGGCACCATGTACGTGGTCTACAACTCGCAGTCTGGTGGACGTTCCACCATTAAGTGCTTGTTTGACATCCATGACACCCTTCTAACCGAAGAAGTGCCTTCGATTTACTTCCCGAAGCGTTACACCAGCCACTCTGGCATGCAGTACCACCCCAAAGAGAAGCAAGTCTACGCCTGGGATGATGGATACCAGACCACTTACAAGCTGgacctaaagaaaaaaaaacaagccaccTAAATCAGCAAGAAATAGCAtacatttctacgtatgtgttataactgattattaatgatttttaaggcgtttacaacctaattaataaccattaataaa

Function

symbol description
olfml1 Orthologous to human OLFML1 (olfactomedin like 1).

NR:

description
olfactomedin-like protein 3

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228458.3 True 1681 mRNA 0.52 3 23161946 23167486

Neighbor

gene id symbol gene type direction distance location
LOC103035009 LOC108410563,LOC107745924 coding downstream 2270 23053191 ~ 23159676 (-)
rep15 NA coding downstream 108686 23052373 ~ 23053260 (-)
LOC103023170 far1,far2,facr1 coding downstream 148766 22977553 ~ 23013180 (-)
LOC103023692 parvaa,LOC108441481,LOC108269306,LOC107686640,LOC107573077,LOC103142483,LOC105910371,LOC107589155,LOC107707483 coding downstream 278910 22868422 ~ 22883036 (-)
LOC103024231 tead1,LOC108269170,LOC105016886,LOC105018259,LOC106587195 coding downstream 341020 22791567 ~ 22820926 (-)
syt9 syt9b,syt9,LOC108410565,LOC107572357,LOC107707488,LOC107686648,LOC107701097 coding upstream 34532 23202018 ~ 23261354 (-)
LOC111195748 NA coding upstream 57119 23224605 ~ 23225055 (-)
LOC103047696 kiaa1549l coding upstream 338522 23506008 ~ 23602345 (-)
LOC103046977 LOC108410746 coding upstream 444577 23612063 ~ 23655103 (-)
tcp11l1 tcp11l1 coding upstream 489748 23657234 ~ 23665880 (-)
G207531 NA non-coding downstream 63040 23095821 ~ 23098906 (-)
G207536 NA non-coding downstream 109879 23051066 ~ 23052067 (-)
G207514 NA non-coding downstream 298929 22763398 ~ 22863017 (-)
G207511 NA non-coding downstream 416119 22743938 ~ 22745827 (-)
G207506 NA non-coding downstream 426921 22711877 ~ 22735025 (-)
G207552 NA non-coding upstream 74258 23241744 ~ 23243273 (-)
G207551 NA non-coding upstream 80047 23247533 ~ 23290028 (-)
G207557 NA non-coding upstream 360949 23528435 ~ 23529136 (-)
G207604 NA non-coding upstream 735428 23902914 ~ 23903144 (-)
G207616 NA non-coding upstream 802831 23970317 ~ 23970947 (-)
LOC103035944 mical3 other downstream 205922 22885432 ~ 22956024 (-)
LOC103034681 LOC108436714 other downstream 914833 21764104 ~ 22247113 (-)
LOC111195740 vma21,LOC108436707,LOC106604103 other downstream 1179216 21979799 ~ 21982730 (-)
LOC103039395 rps6ka6,rps6kal,LOC107572332,LOC107674878,LOC102207076 other downstream 2378962 20677453 ~ 20782984 (-)
LOC103040850 hmgn5 other downstream 2649659 20463703 ~ 20512287 (-)
LOC103033401 spon1b,LOC108413171,LOC107701107,LOC108269023,LOC107745929,LOC107686649 other upstream 52983 23220469 ~ 23412954 (-)
dnajc24 dnajc24 other upstream 771439 23938925 ~ 24020314 (-)
G207707 polr2c other upstream 1357248 24524734 ~ 24529067 (-)
G207772 NA other upstream 1780645 24948131 ~ 24948851 (-)
usb1 NA other upstream 2083749 25251235 ~ 25260167 (-)

Expression


Co-expression Network