CI01000009_13878935_13880850 (DUSP19A, DUSP19)


Basic Information

Item Value
gene id CI01000009_13878935_13880850
gene name DUSP19A, DUSP19
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 13876342 ~ 13880850 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_13878935_13880850.mRNA
GTAGTATCAAGGTCACAGAAATGTAGACGGGCATTACTAGGGAGGGAGGGAGCAACGAACGGTCTCACAGCACAAACTAAGATTAGGAGCCTTTACATTTCTGCTTTGGACATCCCCGCCGCAAATGTGATGCAGTCGCTTGCACAAGAAATAAAATCCTTCTCCAAAACTAATTTGCGGAAACAATGCACCAGAGTAACGACTTTGAGCGGCAGGCGGATTATTGAGACATGGAGAGGTTCCACTGTACAGGTGGTTGAGGAAACAGTACAGCCTGAAACTGCATGTGGATATGTTCAGGATAATAACTGGGATCTTCAGGTTGGATATATTAAACCATATCTGTTGCTTGGGTCACAAGATGCCGCTCATGACTTTGGTACATTGAGGAAATATAAGGTCACACATATATTAAATGTTGCGTATGGTGTGGAAAATGCCTTTCCTGACCTGTTCATCTATAAAACACTGAGCATACTGGATCTACCTGACACTGATATCATATCATATATCAAGGAGTGTGCACAGTTTATAGACCAGGCTAAAGATGAGAAAGGAGTTGTACTTGTCCACTGCAATTCGGGAGTTTCGCGTTCTGTCTCAGTTGTCATTGGATATCTGATGTTGAAGGAAAATCAGGCATTTGGTGACACGTTTGCACTGGTGAAATCAGCTCGACCAGCCTCGTGTCCAAATCCAGGTTTCATGGAACAGCTGAAAAACTTCAGACCACAAGACGCTACACAAGCAAACGGTTTGGGTCATGACTGAACATTATTCTATGGCTGCATCCACTCAATGTTAAAGAGATAATTCACCACATAATTAAAATTCTGTCTTCGTTTTCTCATCCTCACATCAAACTTTCTTTATATTAGGTGTCTTTAACTACTATGTACTAACATTTAAATTAATCATTTGATACAATGCACTTATTTAGTACATACATGTTTTCACATTGTATTTGTATTTTAAAGTGGTTCTTGATTATGACTTCACTTTTTCAACTTTGTTGCTGTTTGAGCATAAACAACATCTGCAAAATTACTGCTCAAAGTTCAATGCAAAGGGAGATATTTTCTTTTACAGAAATCGCTTTTTAAGGACTACAACAAATAGCTGCTGGGGACCACAACAAGCGTCTTTACATAAACCCTGCCCCCGAGAACACGCAACAAAGGGGGTGAGGCCATGTTGGGCTGCTTTAGAGAAGAGGAACAGTTGTTGTAGTAGAGTGTTGATACCATGCCATCATTTTATGCCAGACTGCTTCACAAACGAGGGTCAATTCAACGCTGAATTCACACAAAAGATTAACATGACGGCACATGCTAGTCGATGAGTTGAATCAACTCCACAGCATCTACATAAATTTATCCACTAACCATTCAGAAATGTCCAGTTTCATTCTAAAAGTTGTAACTTCTTCCTGAGCCTCTCCATCAGTGTCCGACTCCGGTTTGAGCAATGTAAGGCTAAACACCGTTACTGACAATTGTCATTTTGGCTGCGTGAGATTCTCCAGCTTTGTTGTTGTTGAGCAACAGATGCGTGAGCTGTTAAAGCTCCGCCCTCTTCTGGAAAGTGTCAGGGAGCAGTAGCTCATTTGCATTTTATAGGGACACACACAAAAATGGTGTGTTTTTGCTCACACCCAAATAGGGGCAAATTTGACAAGCTATAATAAATTATCTGTGGGGTATTTTGAGCTGCAACTTCACAAACACATTCTGGAGACACCAGAGACTTATATTACATCTTGTGAAAAGGGGCCTAATAGGTCCCCTTTAAAAATACATGCATGTAATTACATCTGTAATTAATTTATGTAATTACATCTGTAATTGCACTGTTGACGCTTCCTCTACCTCTTAACCCACCCTTAAACCTACCCATACCACCAAACCTGTCCCTAACCTTACCAGTGTCCCACCTCAGTAGCAGCAAAAGTGTTTTGGAATATAACATCAACACAATAAGTAAACCGGACTTATTTGTTGATGTAAGCACATAGTAGTTGAAGACACCTAATATAAAATGTGACTTATTTCTTTCTTCTGTATAACACAAATGGTGATATTTATAGAGCATGTATAACCTGCTATTTTCCTTAAAGTGAATAGTTTGGTAAATAACTCAAATTTCAGTCTGTTCCTCACCCAAAGCTTAGAATAGCACATGAGTTGTATGCACTACTTTTATGGAGTTTTTTTTTGTTTTGTCTTTTTGGATTTGAACAGTCTTTCACAAAAAAAGAAATATATGATATGAGGGTGAGTAAATATTGACAGAATATAAATTTTTGGCGAACTTCTCTTTTAAAGCCACCAGTGCTTCCATTGCAGTCTCATATATGGCTTTGATTTAGCACTTTGGAATTGTTTTATAGGTGCTAAACCTGCAAAAAAGGGAACATTCTCAGAACTTCCCTAAAGTTCTGGCAAGGTTCTCTCAAAGTTATGAACAAACGTTCTTCCAGTAACATTAATACAACATCTGTTCAAAGTTATCTGGTCTTTAATAATGTTCTCAAAATGTTAGCACAAAAACATTTTTTACATTGTTCATGGAACGTTTTTTTTTCTTTTCTCTCTGAAATGTTAGTTGGATATTCATCTAACATTTTTACTTCTTTCAGAATGTTCATAGAACTTTCAAAAGTAACACCCATAATGTTTGCAAAATGGAATGTTCCTTTAATGTTTGCATAAGATTTTTTTTTTTAATATTTAAAAAAACATGGCATTTCGAATGTTCAGAGAACATTCAAAATAACATTGTCATAACTTTATGGGAACATTAGCAAAACGTTCTTAGAACATTTTATTGTTAGCTGGGAATATGACAAAAAAGACAAGTGAGAGCAGCCACAGGCATTACAATACACTGAAAAAAATATATATAAATAAACAAAAAATGTCCTGGTAATTTTCCATCAGGACATTATCTATTTCTGTTAACCCTAAAACACAATTCAATGCAGTACAATACATAATTCAAAATACAGGTAAAACACCTGTAAAAAATCAATATGGAAAATTACTTCATATTAATACAGTACATTGTGTCCTATGTTTACGGACATTGCAGCATTGGGAAAAACTTGCTTACTTTTAGTTAATGAGTTGCAATTTGAATTAGCTCTACAGGATGTTGAATTGGAATTTGAATCAAAATGACAGGAAGAGGAATTTACTGAATTGCAGTACTAAGAAATTCACTACAGTCACAGAAGAGATTGCATTAGTTCCCATTCCCAATATACCATATTATTTGTAATTCCATAAATTCTATTACAGACTACATTTCAATTTCAAGAATTTAAAGGCCATTCTATGGGGTATACATTTCTTATTATAATAAA

Function

symbol description
dusp19a Predicted to enable JUN kinase phosphatase activity. Predicted to be involved in regulation of MAP kinase activity. Predicted to act upstream of or within protein dephosphorylation. Predicted to be active in cytoplasm. Orthologous to human DUSP19 (dual specificity phosphatase 19).
dusp19 Predicted to enable several functions, including phosphoprotein phosphatase activity; protein kinase binding activity; and protein kinase regulator activity. Predicted to be involved in negative regulation of JUN kinase activity; positive regulation of JNK cascade; and positive regulation of JUN kinase activity. Predicted to act upstream of or within JNK cascade; negative regulation of MAPK cascade; and protein dephosphorylation. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0016311 dephosphorylation biological_process

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_13878935_13880850.mRNA True 3364 mRNA 0.36 4 13876342 13880850

Neighbor

gene id symbol gene type direction distance location
CI01000009_13761020_13794137 PDE1A coding downstream 82154 13760110 ~ 13794188 (-)
CI01000009_13667246_13668040 NDF1, NEUROD1 coding downstream 207745 13666453 ~ 13668597 (-)
CI01000009_13585375_13664189 CERKL coding downstream 212153 13583450 ~ 13664189 (-)
CI01000009_13350460_13383813 NA coding downstream 491673 13350157 ~ 13384669 (-)
CI01000009_13273365_13305127 CWC22 coding downstream 571215 13273365 ~ 13305127 (-)
CI01000009_13946619_13952884 NA coding upstream 65649 13946499 ~ 13953721 (-)
CI01000009_13963789_13974296 DNAJC10 coding upstream 82099 13962949 ~ 13974296 (-)
CI01000009_13975122_13976026 NA coding upstream 94249 13975099 ~ 13978614 (-)
CI01000009_13983271_13988001 NA coding upstream 102358 13983208 ~ 13988348 (-)
CI01000009_13990326_14004387 VIL1 coding upstream 108882 13989732 ~ 14004826 (-)
G59470 NA non-coding downstream 11739 13826486 ~ 13864603 (-)
G59472 NA non-coding downstream 56346 13799998 ~ 13819996 (-)
G59473 NA non-coding downstream 88929 13700592 ~ 13787413 (-)
G59457 NA non-coding downstream 194620 13680978 ~ 13681722 (-)
G59489 NA non-coding upstream 3122 13883972 ~ 13931681 (-)
G59488 NA non-coding upstream 58595 13939445 ~ 13940628 (-)
G59491 NA non-coding upstream 158474 14039324 ~ 14039893 (-)
G59552 NA non-coding upstream 194774 14075624 ~ 14075833 (-)
G59602 NA non-coding upstream 284042 14164892 ~ 14214853 (-)
G59097 NA other downstream 1586824 12288217 ~ 12289518 (-)
CI01000009_08858198_08860555 NA other downstream 5015779 8856310 ~ 8860563 (-)
G55814 NA other downstream 5448330 8425821 ~ 8428012 (-)
G53515 NA other downstream 8371094 5502395 ~ 5505248 (-)
G52828 NA other downstream 9644873 4217420 ~ 4231469 (-)
G59490 NA other upstream 152714 14033564 ~ 14037873 (-)
G59811 NA other upstream 981547 14862397 ~ 14887464 (-)
G59941 NA other upstream 1251254 15132104 ~ 15132503 (-)
CI01000009_15318811_15390382 TNS1 other upstream 1495410 15318811 ~ 15390382 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_038103 dusp19a coding NC_007120.7 CM002893.2 44713033 ~ 44718628 (-)